Guide to the Human Genome
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Name: KRTAP5-11 Sequence: fasta or formatted (156aa) NCBI GI: 53292629
Description:

keratin associated protein 5-11

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.6          1           1
 C cysteine           35.3         55           3
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.3          2           1
 G glycine            19.2         30           2
 H histidine           0.0          0           0
 I isoleucine          1.3          2           1
 K lysine              5.1          8           1
 L leucine             0.0          0           0
 M methionine          0.6          1           1
 N asparagine          0.6          1           1
 P proline             5.1          8           1
 Q glutamine           5.1          8           1
 R arginine            0.0          0           0
 S serine             22.4         35           3
 T threonine           0.0          0           0
 V valine              3.2          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-11 
KRTAP5-7              0.823   keratin associated protein 5-7 
KRTAP5-8              0.782   keratin associated protein 5-8 
KRTAP5-5              0.771   keratin associated protein 5-5 
KRTAP5-9              0.736   keratin associated protein 5-9 
KRTAP5-10             0.730   keratin associated protein 5-10 
KRTAP5-3              0.728   keratin associated protein 5-3 
KRTAP5-2              0.706   keratin associated protein 5-2 
KRTAP5-6              0.610   keratin associated protein 5-6 
KRTAP5-4              0.589   keratin associated protein 5-4 
KRTAP5-1              0.583   keratin associated protein 5-1 
KRTAP4-8              0.316   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.316   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.316   keratin associated protein 4-3 
KRTAP4-8              0.313   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.313   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.311   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.311   keratin associated protein 4-9 
KRTAP4-9              0.308   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.305   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.305   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.305   keratin associated protein 4-12 
KRTAP4-11             0.305   keratin associated protein 4-11 
KRTAP4-8              0.300   PREDICTED: keratin associated protein 4-8 
KRTAP10-2             0.297   keratin associated protein 10-2 
KRTAP4-5              0.297   keratin associated protein 4-5 
KRTAP4-2              0.286   keratin associated protein 4-2 
KRTAP4-8              0.286   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.286   keratin associated protein 4.8 
KRTAP10-4             0.283   keratin associated protein 10-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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