Guide to the Human Genome
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Name: LOC100127946 Sequence: fasta or formatted (164aa) NCBI GI: 169202954
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {91aa} PREDICTED: hypothetical protein
alt prot {252aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         12           1
 C cysteine            2.4          4           1
 D aspartate           3.7          6           2
 E glutamate           7.3         12           2
 F phenylalanine       2.4          4           1
 G glycine             9.8         16           3
 H histidine           3.0          5           1
 I isoleucine          3.7          6           2
 K lysine              1.2          2           1
 L leucine             7.3         12           2
 M methionine          1.2          2           1
 N asparagine          1.2          2           1
 P proline            12.2         20           3
 Q glutamine           4.3          7           2
 R arginine            6.1         10           2
 S serine             11.0         18           2
 T threonine           6.7         11           1
 V valine              6.1         10           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100127946          0.409   PREDICTED: hypothetical protein 
EPHA10                0.019   EPH receptor A10 isofom 3 
GLI3                  0.016   GLI-Kruppel family member GLI3 
IQSEC1                0.016   IQ motif and Sec7 domain 1 isoform a 
MCPH1                 0.016   microcephalin 
SEC31B                0.016   SEC31 homolog B 
DDN                   0.013   dendrin 
PRDM1                 0.013   PR domain containing 1, with ZNF domain isoform 1 [...
PRDM1                 0.013   PR domain containing 1, with ZNF domain isoform 2 [H...
ISLR2                 0.013   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.013   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.013   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.013   immunoglobulin superfamily containing leucine-rich ...
PELP1                 0.009   proline, glutamic acid and leucine rich protein 1 [...
ZNF843                0.009   zinc finger protein 843 
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.009   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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