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Search of human proteins with 169202954
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169202954 PREDICTED: hypothetical protein [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169202954 PREDICTED: hypothetical protein [Homo sapiens] 343 5e-95
gi|169203550 PREDICTED: hypothetical protein [Homo sapiens] 155 1e-38
gi|150456460 EPH receptor A10 isofom 3 [Homo sapiens] 31 0.42
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens] 30 0.72
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 30 0.94
gi|122891872 microcephalin [Homo sapiens] 30 1.2
gi|14149696 SEC31 homolog B [Homo sapiens] 30 1.2
gi|194272140 dendrin [Homo sapiens] 29 1.6
gi|172072684 PR domain containing 1, with ZNF domain isoform 1 [... 29 2.1
gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [H... 29 2.1
gi|194306623 immunoglobulin superfamily containing leucine-rich ... 29 2.1
gi|194306621 immunoglobulin superfamily containing leucine-rich ... 29 2.1
gi|39930401 immunoglobulin superfamily containing leucine-rich r... 29 2.1
gi|194306618 immunoglobulin superfamily containing leucine-rich ... 29 2.1
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 28 2.7
gi|211059441 zinc finger protein 843 [Homo sapiens] 28 3.6
gi|193788732 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788730 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788728 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788724 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788720 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|120433602 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788548 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788544 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788542 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788540 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788538 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788536 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193794832 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
gi|193788534 calcium channel, voltage-dependent, L type, alpha 1... 28 3.6
>gi|169202954 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 343 bits (879), Expect = 5e-95
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ 60
MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ
Sbjct: 1 MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ 60
Query: 61 PHKGPRRAWEREIPHTLLPSSPPTLIISAGGGVSSHSGQPHSTAQDTYATLLPDAFEERS 120
PHKGPRRAWEREIPHTLLPSSPPTLIISAGGGVSSHSGQPHSTAQDTYATLLPDAFEERS
Sbjct: 61 PHKGPRRAWEREIPHTLLPSSPPTLIISAGGGVSSHSGQPHSTAQDTYATLLPDAFEERS 120
Query: 121 SFAVVTATYREVLRCGRRAGEESPPPDDLNPFSQQTFNPPVTVA 164
SFAVVTATYREVLRCGRRAGEESPPPDDLNPFSQQTFNPPVTVA
Sbjct: 121 SFAVVTATYREVLRCGRRAGEESPPPDDLNPFSQQTFNPPVTVA 164
>gi|169203550 PREDICTED: hypothetical protein [Homo sapiens]
Length = 91
Score = 155 bits (393), Expect = 1e-38
Identities = 71/73 (97%), Positives = 72/73 (98%)
Query: 1 MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ 60
MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ
Sbjct: 1 MQEGDIGLEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQ 60
Query: 61 PHKGPRRAWEREI 73
PHKGPRRAWER +
Sbjct: 61 PHKGPRRAWERTL 73
>gi|150456460 EPH receptor A10 isofom 3 [Homo sapiens]
Length = 1008
Score = 31.2 bits (69), Expect = 0.42
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 26 SEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRRAWEREIPHTLL---PSSP 82
S++T S G+ G C CGP+V PR+A RE TLL P +
Sbjct: 369 SDVTYSLLCLRCGREGPAGACEPCGPRVAFL--------PRQAGLRERAATLLHLRPGAR 420
Query: 83 PTLIISAGGGVSSHSGQPHSTAQDTYA 109
T+ ++A GVS P + A TYA
Sbjct: 421 YTVRVAALNGVSG----PAAAAGTTYA 443
>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
Length = 1580
Score = 30.4 bits (67), Expect = 0.72
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 10 GLPPREVPTVGHCAEWSEIT----SSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGP 65
G PP +P + + + + + PG +L + APR CS G G LQPH P
Sbjct: 939 GPPPTPLPNMERMSLKTRLALLGDALEPGVALPPVHAPRRCSDGGAHGYGRRHLQPHDAP 998
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 30.0 bits (66), Expect = 0.94
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 35 SSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRRAWEREI---PHTLLPSSPPTLIISAGG 91
S GK G S V G +I PH R RE PH +P+S L G
Sbjct: 916 SEAGKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLL----GS 971
Query: 92 GVSSHSGQPHSTAQDTYATLLP 113
S G+P A A LP
Sbjct: 972 LFGSKRGKPPPQAHLPSAPALP 993
>gi|122891872 microcephalin [Homo sapiens]
Length = 835
Score = 29.6 bits (65), Expect = 1.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 117 EERSSFAVVTATYREVLRCGRRAGEESPPPDDLNPFSQQTFNP 159
E R++ + VT+ E LRC R+AG+E P+ N FS +P
Sbjct: 491 EGRATSSCVTSAPEEALRCCRQAGKEDACPEG-NGFSYTIEDP 532
>gi|14149696 SEC31 homolog B [Homo sapiens]
Length = 1179
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 16/58 (27%)
Query: 38 GKMGAPRDCSSCGPQVLGYVILQPHKGPRRAWE-----------REIPHTLLPSSPPT 84
G GAP CSS P IL PH GP+ +W+ ++P T +P +P T
Sbjct: 968 GDPGAP--CSSVLPTT---GILTPHPGPQDSWKEAPAPRGNLQRNKLPETFMPPAPIT 1020
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 29.3 bits (64), Expect = 1.6
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 8 LEGLP----PREVPTVGHCAEWSEITSSAPGSS-LGKMGAPRDCSSCGPQVLGYVILQPH 62
L GLP P + VG S S PGS+ G G R P +++L+
Sbjct: 156 LAGLPAPLRPERLAPVGRAPRPSAQPQSDPGSAWAGPWGGRRPGP---PSYEAHLLLRGS 212
Query: 63 KG--PRRAWEREIPHTLLPS 80
G PRR W+R P+ PS
Sbjct: 213 AGTAPRRRWDRPPPYVAPPS 232
>gi|172072684 PR domain containing 1, with ZNF domain isoform 1
[Homo sapiens]
Length = 825
Score = 28.9 bits (63), Expect = 2.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 73 IPHTLLPSSP-PTLIISAGGGVSSHSGQPHSTAQDTYATLLPDAFEERSSFAVVTATY 129
I + +PSS P+ + S S PHS+ +T + + P + E R S+A + A+Y
Sbjct: 324 ITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASY 381
>gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [Homo
sapiens]
Length = 691
Score = 28.9 bits (63), Expect = 2.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 73 IPHTLLPSSP-PTLIISAGGGVSSHSGQPHSTAQDTYATLLPDAFEERSSFAVVTATY 129
I + +PSS P+ + S S PHS+ +T + + P + E R S+A + A+Y
Sbjct: 190 ITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASY 247
>gi|194306623 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 2.1
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 8 LEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRR 67
L+G+P +P + CA S S+ P + AP G + + I H PR
Sbjct: 217 LQGVPVYRLPALP-CAPPSVHLSAEP-----PLEAPGTPLRAGLAFVLHCIADGHPTPRL 270
Query: 68 AWEREIPHTLLPSSPPTLIISAGGGVSSHSGQ 99
W+ +IP + PP L GV + G+
Sbjct: 271 QWQLQIPGGTVVLEPPVL-SGEDDGVGAEEGE 301
>gi|194306621 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 2.1
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 8 LEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRR 67
L+G+P +P + CA S S+ P + AP G + + I H PR
Sbjct: 217 LQGVPVYRLPALP-CAPPSVHLSAEP-----PLEAPGTPLRAGLAFVLHCIADGHPTPRL 270
Query: 68 AWEREIPHTLLPSSPPTLIISAGGGVSSHSGQ 99
W+ +IP + PP L GV + G+
Sbjct: 271 QWQLQIPGGTVVLEPPVL-SGEDDGVGAEEGE 301
>gi|39930401 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 2.1
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 8 LEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRR 67
L+G+P +P + CA S S+ P + AP G + + I H PR
Sbjct: 217 LQGVPVYRLPALP-CAPPSVHLSAEP-----PLEAPGTPLRAGLAFVLHCIADGHPTPRL 270
Query: 68 AWEREIPHTLLPSSPPTLIISAGGGVSSHSGQ 99
W+ +IP + PP L GV + G+
Sbjct: 271 QWQLQIPGGTVVLEPPVL-SGEDDGVGAEEGE 301
>gi|194306618 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 2.1
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 8 LEGLPPREVPTVGHCAEWSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRR 67
L+G+P +P + CA S S+ P + AP G + + I H PR
Sbjct: 217 LQGVPVYRLPALP-CAPPSVHLSAEP-----PLEAPGTPLRAGLAFVLHCIADGHPTPRL 270
Query: 68 AWEREIPHTLLPSSPPTLIISAGGGVSSHSGQ 99
W+ +IP + PP L GV + G+
Sbjct: 271 QWQLQIPGGTVVLEPPVL-SGEDDGVGAEEGE 301
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 28.5 bits (62), Expect = 2.7
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 12 PPREVPTVGHCAEWSEITSSAPGSSLG-----KMGAPRDCSSCGPQVLGYVILQPHKGP- 65
PP +P+VG + S+ P S G + G P + G V G V + P P
Sbjct: 667 PPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPTTANHLGLSVPGLVSVPPRLLPG 726
Query: 66 ---RRAWEREIPHTLLPSS--PPTL 85
RA E P L PS PPT+
Sbjct: 727 PENHRAGSNEDP-ILAPSGTPPPTI 750
>gi|211059441 zinc finger protein 843 [Homo sapiens]
Length = 348
Score = 28.1 bits (61), Expect = 3.6
Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 25 WSEITSSAPGSSLGKMGAPRDCSSCGPQVLGYVILQPHKGPRRAWEREIPHTLLPSSPPT 84
W + + P ++ + P C SCG V L +R +PH P
Sbjct: 126 WGPVEADRPPANSHRRVCPFCCCSCGDSVNEKTSLS---------QRVLPH-------PG 169
Query: 85 LIISAGGGVSSHSGQPHSTAQDTYATLLP 113
GG V S S P S A D+ + L P
Sbjct: 170 EKTCRGGSVESVSLAPSSVAPDSTSGLRP 198
>gi|193788732 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 5 [Homo sapiens]
Length = 2166
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1988 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2041
>gi|193788730 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 4 [Homo sapiens]
Length = 2173
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1995 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2048
>gi|193788728 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 3 [Homo sapiens]
Length = 2179
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 2001 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2054
>gi|193788724 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 2 [Homo sapiens]
Length = 2186
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 2008 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2061
>gi|193788720 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 1 [Homo sapiens]
Length = 2221
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 2043 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2096
>gi|120433602 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 18 [Homo sapiens]
Length = 2138
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1960 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2013
>gi|193788548 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 20 [Homo sapiens]
Length = 2127
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1949 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2002
>gi|193788544 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 19 [Homo sapiens]
Length = 2135
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1957 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2010
>gi|193788542 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 17 [Homo sapiens]
Length = 2138
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1960 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2013
>gi|193788540 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 16 [Homo sapiens]
Length = 2138
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1960 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2013
>gi|193788538 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 15 [Homo sapiens]
Length = 2138
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1960 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2013
>gi|193788536 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 14 [Homo sapiens]
Length = 2138
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1960 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2013
>gi|193794832 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoforom 13 [Homo sapiens]
Length = 2144
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1966 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2019
>gi|193788534 calcium channel, voltage-dependent, L type, alpha 1C
subunit isoform 12 [Homo sapiens]
Length = 2146
Score = 28.1 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 17/54 (31%)
Query: 7 GLEGLPPREVPTVG-----------------HCAEWSEITSSAPGSSLGKMGAP 43
G G PP+ VPT+ HC W+E T GSS + P
Sbjct: 1968 GSRGWPPQPVPTLRLEGVESSEKLNSSFPSIHCGSWAETTPGGGGSSAARRVRP 2021
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,707,247
Number of Sequences: 37866
Number of extensions: 442898
Number of successful extensions: 1117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1080
Number of HSP's gapped (non-prelim): 104
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.