LOC100127946 17999

Name: LOC100127946	Sequence: fasta or formatted (252aa)		NCBI GI: 239744421
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {164aa} PREDICTED: hypothetical protein alt prot {91aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 22 2 C cysteine 2.0 5 1 D aspartate 3.2 8 1 E glutamate 3.2 8 2 F phenylalanine 1.2 3 1 G glycine 16.7 42 3 H histidine 2.8 7 1 I isoleucine 0.8 2 1 K lysine 2.4 6 2 L leucine 8.7 22 3 M methionine 0.4 1 1 N asparagine 0.4 1 1 P proline 11.5 29 3 Q glutamine 5.6 14 2 R arginine 11.9 30 3 S serine 9.5 24 2 T threonine 3.2 8 1 V valine 6.0 15 2 W tryptophan 2.0 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein COL1A1 0.058 alpha 1 type I collagen preproprotein COL6A6 0.046 collagen type VI alpha 6 COL3A1 0.042 collagen type III alpha 1 preproprotein COL11A1 0.042 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.042 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.042 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100293055 0.040 PREDICTED: similar to COL22A1 protein COL22A1 0.040 collagen, type XXII, alpha 1 COL7A1 0.038 alpha 1 type VII collagen precursor COL5A3 0.036 collagen, type V, alpha 3 preproprotein COL1A2 0.034 alpha 2 type I collagen COL8A2 0.034 collagen, type VIII, alpha 2 COL6A2 0.034 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.034 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.034 alpha 2 type VI collagen isoform 2C2 precursor [Hom... COL2A1 0.034 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.034 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.034 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.034 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.034 collagen, type XI, alpha 2 isoform 1 preproprotein ... WDR33 0.034 WD repeat domain 33 isoform 1 FLJ30375 0.030 PREDICTED: hypothetical protein FLJ30375 0.030 PREDICTED: hypothetical protein FLJ30375 0.030 PREDICTED: hypothetical protein COL27A1 0.028 collagen, type XXVII, alpha 1 COL4A2 0.028 alpha 2 type IV collagen preproprotein COL5A1 0.028 alpha 1 type V collagen preproprotein LOC100290261 0.028 PREDICTED: hypothetical protein XP_002347648 WTIP 0.028 Wilms tumor 1 interacting protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.