Guide to the Human Genome
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Name: ZNF843 Sequence: fasta or formatted (348aa) NCBI GI: 211059441
Description:

zinc finger protein 843

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         36           2
 C cysteine            4.6         16           3
 D aspartate           1.7          6           1
 E glutamate           3.7         13           1
 F phenylalanine       2.6          9           1
 G glycine             8.0         28           2
 H histidine           3.2         11           1
 I isoleucine          0.0          0           0
 K lysine              2.0          7           1
 L leucine             9.8         34           2
 M methionine          0.6          2           1
 N asparagine          1.1          4           1
 P proline            13.8         48           4
 Q glutamine           5.7         20           2
 R arginine            8.9         31           2
 S serine             11.5         40           2
 T threonine           3.7         13           1
 V valine              6.0         21           1
 W tryptophan          2.0          7           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 843 
ZNF48                 0.045   zinc finger protein 48 
MZF1                  0.038   zinc finger protein 42 isoform 2 
MZF1                  0.038   zinc finger protein 42 isoform 1 
ZNF324                0.035   zinc finger protein 324 
ZNF628                0.035   zinc finger protein 628 
ZNF304                0.035   zinc finger protein 304 
ZNF354B               0.032   zinc finger protein 354B 
ZNF324B               0.032   zinc finger protein 324B 
ZIK1                  0.032   zinc finger protein interacting with K protein 1 [Ho...
ZNF786                0.031   zinc finger protein 786 
ZNF16                 0.031   zinc finger protein 16 
ZNF16                 0.031   zinc finger protein 16 
ZNF133                0.031   zinc finger protein 133 
ZNF133                0.031   zinc finger protein 133 
ZNF502                0.031   zinc finger protein 502 
ZNF502                0.031   zinc finger protein 502 
ZNF502                0.031   zinc finger protein 502 
ZNF502                0.031   zinc finger protein 502 
ZNF354A               0.031   zinc finger protein 354A 
ZNF578                0.030   zinc finger protein 578 
ZSCAN10               0.030   zinc finger and SCAN domain containing 10 
SYNPO                 0.030   synaptopodin isoform A 
ZNF132                0.030   zinc finger protein 132 
ZNF668                0.030   zinc finger protein 668 
ZNF34                 0.028   zinc finger protein 34 
ZNF483                0.028   zinc finger protein 483 isoform a 
ZNF514                0.028   zinc finger protein 514 
YLPM1                 0.028   YLP motif containing 1 
LOC100133142          0.027   PREDICTED: similar to zinc finger protein 208 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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