Guide to the Human Genome
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Name: SLC25A42 Sequence: fasta or formatted (318aa) NCBI GI: 60460887
Description:

solute carrier family 25, member 42

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         31           2
 C cysteine            0.3          1           1
 D aspartate           1.9          6           1
 E glutamate           5.0         16           2
 F phenylalanine       5.0         16           2
 G glycine             8.5         27           1
 H histidine           2.2          7           1
 I isoleucine          4.7         15           2
 K lysine              3.8         12           1
 L leucine            10.4         33           2
 M methionine          3.1         10           1
 N asparagine          1.6          5           1
 P proline             5.0         16           2
 Q glutamine           2.5          8           1
 R arginine            8.8         28           3
 S serine              8.2         26           3
 T threonine           5.7         18           2
 V valine              7.2         23           2
 W tryptophan          0.9          3           1
 Y tyrosine            5.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 42 
SLC25A16              0.286   solute carrier family 25, member 16 
SLC25A24              0.258   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.258   solute carrier family 25 member 24 isoform 2 
SLC25A23              0.250   solute carrier family 25, member 23 
LOC100292202          0.250   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.250   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.250   solute carrier family 25, member 25 isoform c 
SLC25A25              0.250   solute carrier family 25, member 25 isoform a 
SLC25A25              0.250   solute carrier family 25, member 25 isoform d 
SLC25A25              0.250   solute carrier family 25, member 25 isoform b 
SLC25A41              0.193   solute carrier family 25, member 41 
SLC25A43              0.167   mitochondrial solute carrier protein 
SLC25A4               0.157   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A19              0.154   solute carrier family 25, member 19 
SLC25A19              0.154   solute carrier family 25, member 19 
SLC25A19              0.154   solute carrier family 25, member 19 
SLC25A31              0.152   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A6               0.147   solute carrier family 25, member A6 
SLC25A5               0.142   solute carrier family 25, member 5 
SLC25A40              0.111   mitochondrial carrier family protein 
SLC25A13              0.107   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.107   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A30              0.106   solute carrier family 25, member 30 
SLC25A20              0.106   carnitine/acylcarnitine translocase 
SLC25A12              0.099   solute carrier family 25, member 12 
SLC25A14              0.096   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.096   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A32              0.093   solute carrier family 25, member 32 
SLC25A1               0.089   solute carrier family 25 (mitochondrial carrier; cit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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