C15orf52 5738

Name: C15orf52	Sequence: fasta or formatted (534aa)		NCBI GI: 155029552
Description: hypothetical protein LOC388115		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 52 2 C cysteine 1.7 9 1 D aspartate 3.9 21 1 E glutamate 8.8 47 3 F phenylalanine 0.4 2 1 G glycine 12.0 64 2 H histidine 0.9 5 1 I isoleucine 1.9 10 1 K lysine 3.9 21 2 L leucine 6.9 37 2 M methionine 1.5 8 1 N asparagine 1.1 6 1 P proline 9.7 52 3 Q glutamine 6.9 37 2 R arginine 10.9 58 3 S serine 8.8 47 2 T threonine 4.1 22 2 V valine 4.3 23 2 W tryptophan 2.1 11 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC388115 CCDC9 0.046 coiled-coil domain containing 9 COL2A1 0.030 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.030 collagen, type II, alpha 1 isoform 2 precursor [Hom... COLQ 0.028 acetylcholinesterase collagen-like tail subunit isof... COLQ 0.028 acetylcholinesterase collagen-like tail subunit isof... COL28A1 0.025 collagen, type XXVIII precursor COL1A1 0.025 alpha 1 type I collagen preproprotein COL5A2 0.025 alpha 2 type V collagen preproprotein COL3A1 0.023 collagen type III alpha 1 preproprotein LOC100288496 0.023 PREDICTED: hypothetical protein XP_002342747 COL9A3 0.022 alpha 3 type IX collagen COL27A1 0.021 collagen, type XXVII, alpha 1 PRB2 0.021 proline-rich protein BstNI subfamily 2 COL7A1 0.021 alpha 1 type VII collagen precursor COL5A3 0.021 collagen, type V, alpha 3 preproprotein SCARF2 0.021 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.021 scavenger receptor class F, member 2 isoform 2 [Homo... COLQ 0.021 acetylcholinesterase collagen-like tail subunit iso... COL1A2 0.020 alpha 2 type I collagen C2orf55 0.020 hypothetical protein LOC343990 COL16A1 0.019 alpha 1 type XVI collagen precursor SMTN 0.019 smoothelin isoform b SMTN 0.019 smoothelin isoform c COL18A1 0.019 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.019 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.019 alpha 1 type XVIII collagen isoform 1 precursor [Ho... HMGA2 0.019 high mobility group AT-hook 2 isoform a COL17A1 0.019 alpha 1 type XVII collagen COL8A2 0.018 collagen, type VIII, alpha 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.