LOC100288496 17476

Name: LOC100288496	Sequence: fasta or formatted (306aa)		NCBI GI: 239743051
Description: PREDICTED: hypothetical protein XP_002342747		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 37 4 C cysteine 1.3 4 1 D aspartate 3.3 10 1 E glutamate 8.2 25 3 F phenylalanine 0.0 0 0 G glycine 12.7 39 2 H histidine 1.0 3 1 I isoleucine 0.0 0 0 K lysine 3.6 11 1 L leucine 2.0 6 1 M methionine 0.7 2 1 N asparagine 0.3 1 1 P proline 9.5 29 1 Q glutamine 13.1 40 3 R arginine 14.4 44 2 S serine 9.5 29 4 T threonine 7.5 23 2 V valine 0.7 2 1 W tryptophan 0.3 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342747 LOC100293596 0.689 PREDICTED: similar to mucin LOC100134702 0.646 PREDICTED: similar to mucin LOC100292370 0.066 PREDICTED: hypothetical protein SCAF1 0.061 SR-related CTD-associated factor 1 FLJ37078 0.061 hypothetical protein LOC222183 SRRM2 0.059 splicing coactivator subunit SRm300 FLG 0.056 filaggrin TCOF1 0.054 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.054 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.054 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.054 Treacher Collins-Franceschetti syndrome 1 isoform c ... APC2 0.052 adenomatosis polyposis coli 2 NOLC1 0.051 nucleolar and coiled-body phosphoprotein 1 TCOF1 0.047 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.047 Treacher Collins-Franceschetti syndrome 1 isoform b ... SFRS4 0.045 splicing factor, arginine/serine-rich 4 BSN 0.045 bassoon protein HRNR 0.045 hornerin LOC100292035 0.045 PREDICTED: hypothetical protein XP_002345623 ZC3H18 0.045 zinc finger CCCH-type containing 18 ZC3H4 0.044 zinc finger CCCH-type containing 4 LOC100286959 0.044 PREDICTED: hypothetical protein XP_002343921 LOC100292262 0.042 PREDICTED: hypothetical protein CXorf67 0.042 hypothetical protein LOC340602 ARX 0.042 aristaless related homeobox CACNA1A 0.042 calcium channel, alpha 1A subunit isoform 4 LOC100290372 0.042 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.042 PREDICTED: hypothetical protein XP_002342652 LOC643368 0.040 PREDICTED: similar to hCG1803335 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.