PML 5614

Name: PML	Sequence: fasta or formatted (585aa)		NCBI GI: 15451779
Description: promyelocytic leukemia protein isoform 10		Referenced in: Nucleus and Nucleolus Tripartite Motif Family
Other entries for this name: alt prot [560aa] promyelocytic leukemia protein isoform 5 alt prot [829aa] promyelocytic leukemia protein isoform 9 alt prot [423aa] promyelocytic leukemia protein isoform 7 alt prot [633aa] promyelocytic leukemia protein isoform 6 alt prot [882aa] promyelocytic leukemia protein isoform 1 alt prot [435aa] promyelocytic leukemia protein isoform 8 alt prot [611aa] promyelocytic leukemia protein isoform 2 alt prot [781aa] promyelocytic leukemia protein isoform 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 55 2 C cysteine 4.4 26 2 D aspartate 5.8 34 2 E glutamate 9.2 54 3 F phenylalanine 3.2 19 2 G glycine 3.8 22 1 H histidine 2.1 12 1 I isoleucine 2.6 15 1 K lysine 3.4 20 2 L leucine 8.7 51 2 M methionine 1.5 9 1 N asparagine 2.1 12 2 P proline 7.9 46 3 Q glutamine 7.2 42 2 R arginine 8.0 47 2 S serine 9.9 58 3 T threonine 3.9 23 3 V valine 5.1 30 3 W tryptophan 0.7 4 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 promyelocytic leukemia protein isoform 10 PML 0.980 promyelocytic leukemia protein isoform 6 PML 0.954 promyelocytic leukemia protein isoform 1 PML 0.895 promyelocytic leukemia protein isoform 11 PML 0.875 promyelocytic leukemia protein isoform 9 PML 0.873 promyelocytic leukemia protein isoform 2 PML 0.844 promyelocytic leukemia protein isoform 5 PML 0.716 promyelocytic leukemia protein isoform 8 PML 0.716 promyelocytic leukemia protein isoform 7 LOC652671 0.158 PREDICTED: similar to promyelocytic leukemia protei... TRIM56 0.054 tripartite motif-containing 56 TRIM33 0.050 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.050 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.046 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.046 transcriptional intermediary factor 1 alpha isoform ... TRIM28 0.044 tripartite motif-containing 28 protein TRIM45 0.043 tripartite motif-containing 45 isoform 1 TRIM45 0.043 tripartite motif-containing 45 isoform 2 TRIM2 0.035 tripartite motif-containing 2 isoform 1 RNF207 0.034 ring finger protein 207 TRIM2 0.034 tripartite motif-containing 2 isoform 2 TRIM3 0.028 tripartite motif-containing 3 TRIM3 0.028 tripartite motif-containing 3 TRIM25 0.025 tripartite motif-containing 25 TRIM46 0.023 tripartite motif-containing 46 TRIM66 0.020 tripartite motif-containing 66 TRIM10 0.020 tripartite motif-containing 10 isoform 1 TRIM10 0.020 tripartite motif-containing 10 isoform 2 TRIM39 0.019 tripartite motif-containing 39 isoform 2 TRIM39 0.019 tripartite motif-containing 39 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.