TRIM10 6258

Name: TRIM10	Sequence: fasta or formatted (395aa)		NCBI GI: 157426896
Description: tripartite motif-containing 10 isoform 2		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [481aa] tripartite motif-containing 10 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 25 3 C cysteine 5.6 22 2 D aspartate 4.8 19 2 E glutamate 10.9 43 2 F phenylalanine 4.1 16 2 G glycine 4.3 17 2 H histidine 2.8 11 1 I isoleucine 4.6 18 1 K lysine 3.8 15 1 L leucine 10.4 41 3 M methionine 1.8 7 1 N asparagine 2.3 9 1 P proline 5.8 23 2 Q glutamine 6.8 27 2 R arginine 8.1 32 1 S serine 5.6 22 1 T threonine 4.8 19 1 V valine 5.1 20 2 W tryptophan 1.0 4 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 10 isoform 2 TRIM10 0.926 tripartite motif-containing 10 isoform 1 TRIM15 0.319 tripartite motif protein 15 TRIM26 0.297 tripartite motif-containing 26 TRIM39 0.284 tripartite motif-containing 39 isoform 2 TRIM68 0.277 ring finger protein 137 TRIM39 0.265 tripartite motif-containing 39 isoform 1 TRIM27 0.258 ret finger protein TRIM7 0.255 tripartite motif-containing 7 isoform 1 TRIM58 0.235 tripartite motif-containing 58 TRIM75 0.216 tripartite motif-containing 75 TRIM11 0.216 tripartite motif-containing 11 TRIM21 0.205 tripartite motif protein 21 TRIM38 0.201 tripartite motif-containing 38 TRIM60 0.198 ring finger protein 129 TRIM4 0.196 tripartite motif protein TRIM4 isoform beta TRIM31 0.192 tripartite motif protein 31 TRIM41 0.191 tripartite motif-containing 41 isoform 2 TRIM41 0.191 tripartite motif-containing 41 isoform 1 TRIM4 0.178 tripartite motif protein TRIM4 isoform alpha TRIM6 0.178 tripartite motif-containing 6 isoform 2 TRIM6 0.178 tripartite motif-containing 6 isoform 1 TRIM5 0.164 tripartite motif protein TRIM5 isoform alpha TRIM6-TRIM34 0.164 tripartite motif-containing 6 and tripartite motif-c... TRIM5 0.163 tripartite motif protein TRIM5 isoform delta TRIM5 0.163 tripartite motif protein TRIM5 isoform gamma TRIM22 0.158 tripartite motif-containing 22 TRIM34 0.155 tripartite motif protein 34 isoform 1 TRIM34 0.155 tripartite motif protein 34 isoform 1 TRIM17 0.154 tripartite motif-containing 17 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.