PML 29168

Name: PML	Sequence: fasta or formatted (633aa)		NCBI GI: 4505903
Description: promyelocytic leukemia protein isoform 6		Referenced in: Nucleus and Nucleolus Tripartite Motif Family
Other entries for this name: alt prot [560aa] promyelocytic leukemia protein isoform 5 alt prot [829aa] promyelocytic leukemia protein isoform 9 alt prot [423aa] promyelocytic leukemia protein isoform 7 alt prot [585aa] promyelocytic leukemia protein isoform 10 alt prot [882aa] promyelocytic leukemia protein isoform 1 alt prot [435aa] promyelocytic leukemia protein isoform 8 alt prot [611aa] promyelocytic leukemia protein isoform 2 alt prot [781aa] promyelocytic leukemia protein isoform 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 63 2 C cysteine 4.1 26 2 D aspartate 5.4 34 2 E glutamate 9.3 59 3 F phenylalanine 3.2 20 2 G glycine 4.1 26 1 H histidine 2.1 13 1 I isoleucine 2.5 16 1 K lysine 3.5 22 2 L leucine 8.4 53 2 M methionine 1.6 10 1 N asparagine 1.9 12 2 P proline 8.2 52 3 Q glutamine 7.3 46 2 R arginine 7.6 48 2 S serine 9.6 61 3 T threonine 3.6 23 3 V valine 5.8 37 3 W tryptophan 0.6 4 1 Y tyrosine 1.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 promyelocytic leukemia protein isoform 6 PML 0.975 promyelocytic leukemia protein isoform 1 PML 0.907 promyelocytic leukemia protein isoform 10 PML 0.902 promyelocytic leukemia protein isoform 9 PML 0.900 promyelocytic leukemia protein isoform 2 PML 0.873 promyelocytic leukemia protein isoform 5 PML 0.810 promyelocytic leukemia protein isoform 11 PML 0.662 promyelocytic leukemia protein isoform 8 PML 0.662 promyelocytic leukemia protein isoform 7 LOC652671 0.147 PREDICTED: similar to promyelocytic leukemia protei... TRIM56 0.050 tripartite motif-containing 56 TRIM33 0.046 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.046 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.043 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.043 transcriptional intermediary factor 1 alpha isoform ... TRIM28 0.041 tripartite motif-containing 28 protein TRIM45 0.040 tripartite motif-containing 45 isoform 1 TRIM45 0.040 tripartite motif-containing 45 isoform 2 TRIM2 0.033 tripartite motif-containing 2 isoform 1 RNF207 0.032 ring finger protein 207 TRIM2 0.032 tripartite motif-containing 2 isoform 2 TRIM3 0.025 tripartite motif-containing 3 TRIM3 0.025 tripartite motif-containing 3 TRIM25 0.023 tripartite motif-containing 25 TRIM46 0.021 tripartite motif-containing 46 TRIM66 0.018 tripartite motif-containing 66 TRIM10 0.018 tripartite motif-containing 10 isoform 1 TRIM10 0.018 tripartite motif-containing 10 isoform 2 TRIM39 0.018 tripartite motif-containing 39 isoform 2 TRIM39 0.018 tripartite motif-containing 39 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.