PML 464

Name: PML	Sequence: fasta or formatted (560aa)		NCBI GI: 109637788
Description: promyelocytic leukemia protein isoform 5		Referenced in: Nucleus and Nucleolus Tripartite Motif Family
Other entries for this name: alt prot [829aa] promyelocytic leukemia protein isoform 9 alt prot [423aa] promyelocytic leukemia protein isoform 7 alt prot [585aa] promyelocytic leukemia protein isoform 10 alt prot [633aa] promyelocytic leukemia protein isoform 6 alt prot [882aa] promyelocytic leukemia protein isoform 1 alt prot [435aa] promyelocytic leukemia protein isoform 8 alt prot [611aa] promyelocytic leukemia protein isoform 2 alt prot [781aa] promyelocytic leukemia protein isoform 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 61 2 C cysteine 4.6 26 2 D aspartate 4.3 24 1 E glutamate 8.9 50 3 F phenylalanine 2.9 16 2 G glycine 4.3 24 1 H histidine 2.1 12 1 I isoleucine 2.3 13 1 K lysine 3.8 21 2 L leucine 8.0 45 2 M methionine 1.8 10 1 N asparagine 1.8 10 2 P proline 8.4 47 3 Q glutamine 7.9 44 2 R arginine 8.2 46 2 S serine 8.2 46 2 T threonine 3.9 22 3 V valine 5.7 32 2 W tryptophan 0.7 4 1 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 promyelocytic leukemia protein isoform 5 PML 0.984 promyelocytic leukemia protein isoform 2 PML 0.984 promyelocytic leukemia protein isoform 9 PML 0.984 promyelocytic leukemia protein isoform 6 PML 0.984 promyelocytic leukemia protein isoform 1 PML 0.880 promyelocytic leukemia protein isoform 11 PML 0.880 promyelocytic leukemia protein isoform 10 PML 0.746 promyelocytic leukemia protein isoform 8 PML 0.746 promyelocytic leukemia protein isoform 7 LOC652671 0.136 PREDICTED: similar to promyelocytic leukemia protei... TRIM56 0.057 tripartite motif-containing 56 TRIM33 0.052 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.052 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.048 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.048 transcriptional intermediary factor 1 alpha isoform ... TRIM28 0.046 tripartite motif-containing 28 protein TRIM45 0.045 tripartite motif-containing 45 isoform 1 TRIM45 0.045 tripartite motif-containing 45 isoform 2 TRIM2 0.037 tripartite motif-containing 2 isoform 1 RNF207 0.036 ring finger protein 207 TRIM2 0.036 tripartite motif-containing 2 isoform 2 TRIM3 0.029 tripartite motif-containing 3 TRIM3 0.029 tripartite motif-containing 3 TRIM25 0.026 tripartite motif-containing 25 TRIM46 0.024 tripartite motif-containing 46 TRIM66 0.021 tripartite motif-containing 66 TRIM10 0.021 tripartite motif-containing 10 isoform 1 TRIM10 0.021 tripartite motif-containing 10 isoform 2 TRIM39 0.020 tripartite motif-containing 39 isoform 2 TRIM39 0.020 tripartite motif-containing 39 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.