TRIM46 30451

Name: TRIM46	Sequence: fasta or formatted (759aa)		NCBI GI: 47174859
Description: tripartite motif-containing 46		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 57 2 C cysteine 4.2 32 1 D aspartate 4.3 33 1 E glutamate 6.6 50 2 F phenylalanine 3.3 25 2 G glycine 8.2 62 3 H histidine 2.6 20 1 I isoleucine 2.6 20 1 K lysine 4.0 30 1 L leucine 10.9 83 3 M methionine 1.3 10 1 N asparagine 1.3 10 1 P proline 7.2 55 3 Q glutamine 5.5 42 2 R arginine 7.5 57 2 S serine 6.5 49 3 T threonine 6.1 46 1 V valine 7.2 55 2 W tryptophan 0.8 6 1 Y tyrosine 2.2 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 46 TRIM36 0.388 tripartite motif-containing 36 isoform 1 MID1 0.123 midline 1 MID1 0.123 midline 1 MID1 0.123 midline 1 MID2 0.118 midline 2 isoform 2 MID2 0.112 midline 2 isoform 1 TRIM9 0.099 tripartite motif protein 9 isoform 1 TRIM9 0.095 tripartite motif protein 9 isoform 2 TRIM67 0.088 tripartite motif-containing 67 TRIM63 0.082 muscle specific ring finger protein 1 TRIM54 0.078 ring finger protein 30 isoform 2 TRIM55 0.077 tripartite motif-containing 55 isoform 3 TRIM55 0.077 tripartite motif-containing 55 isoform 1 TRIM55 0.077 tripartite motif-containing 55 isoform 2 TRIM54 0.065 ring finger protein 30 isoform 1 FSD1L 0.061 fibronectin type III and SPRY domain containing 1-li... FSD1L 0.061 fibronectin type III and SPRY domain containing 1-l... FSD1 0.060 fibronectin type III and SPRY domain containing 1 [H... TRIM55 0.048 tripartite motif-containing 55 isoform 4 TRIM42 0.040 tripartite motif-containing 42 TRIM47 0.037 tripartite motif-containing 47 TRIM45 0.035 tripartite motif-containing 45 isoform 2 TRIM45 0.035 tripartite motif-containing 45 isoform 1 TRIM8 0.029 tripartite motif-containing 8 FSD2 0.029 fibronectin type III and SPRY domain containing 2 [H... TRIM24 0.028 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.028 transcriptional intermediary factor 1 alpha isoform ... TRIM59 0.027 tripartite motif-containing 59 TRIM15 0.027 tripartite motif protein 15 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.