Guide to the Human Genome
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Name: KIAA1468 Sequence: fasta or formatted (1216aa) NCBI GI: 109948292
Description:

hypothetical protein LOC57614

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         90           3
 C cysteine            1.3         16           2
 D aspartate           5.4         66           3
 E glutamate           8.2        100           2
 F phenylalanine       3.5         43           2
 G glycine             6.0         73           3
 H histidine           2.7         33           1
 I isoleucine          4.6         56           2
 K lysine              4.9         59           2
 L leucine            13.4        163           3
 M methionine          2.3         28           1
 N asparagine          3.5         42           2
 P proline             6.1         74           2
 Q glutamine           4.3         52           2
 R arginine            5.2         63           2
 S serine              8.1         99           2
 T threonine           4.8         58           2
 V valine              5.9         72           2
 W tryptophan          0.7          8           1
 Y tyrosine            1.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57614 
COL16A1               0.008   alpha 1 type XVI collagen precursor 
COL12A1               0.007   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.007   collagen, type XII, alpha 1 long isoform precursor [...
ARID1B                0.007   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.007   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.007   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KIAA1731              0.007   hypothetical protein LOC85459 
COL14A1               0.006   collagen, type XIV, alpha 1 
LOC100290372          0.006   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.006   PREDICTED: hypothetical protein XP_002342652 
MYH6                  0.006   myosin heavy chain 6 
GOLGA8B               0.005   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.005   golgi autoantigen, golgin subfamily a, 8A 
COL11A1               0.005   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.005   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.005   alpha 1 type XI collagen isoform A preproprotein [Ho...
STRN4                 0.005   zinedin isoform 2 
STRN4                 0.005   zinedin isoform 1 
NKX1-2                0.005   NK1 homeobox 2 
COL1A2                0.005   alpha 2 type I collagen 
LOC100292370          0.005   PREDICTED: hypothetical protein 
MAF                   0.005   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.005   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
JUB                   0.005   ajuba isoform 1 
ZNF541                0.005   zinc finger protein 541 
COL4A1                0.005   alpha 1 type IV collagen preproprotein 
NKX1-2                0.005   PREDICTED: NK1 homeobox 2 
NKX1-2                0.005   PREDICTED: NK1 homeobox 2 
NKX1-2                0.005   PREDICTED: NK1 homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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