Guide to the Human Genome
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Name: KIAA1731 Sequence: fasta or formatted (2601aa) NCBI GI: 160420295
Description:

hypothetical protein LOC85459

Referenced in:

Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        141           3
 C cysteine            1.0         27           1
 D aspartate           4.4        114           2
 E glutamate          10.3        267           3
 F phenylalanine       3.0         78           2
 G glycine             2.7         70           2
 H histidine           3.2         84           2
 I isoleucine          4.7        123           2
 K lysine              6.7        175           3
 L leucine            10.6        277           3
 M methionine          1.3         33           1
 N asparagine          3.4         89           2
 P proline             5.0        130           5
 Q glutamine           9.6        250           3
 R arginine            5.1        133           3
 S serine             11.6        303           5
 T threonine           5.6        146           2
 V valine              4.5        117           3
 W tryptophan          0.4         10           1
 Y tyrosine            1.3         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC85459 
LOC100289922          0.038   PREDICTED: hypothetical protein XP_002347871 
CENPE                 0.016   centromere protein E 
GOLGB1                0.013   golgi autoantigen, golgin subfamily b, macrogolgin ...
TPR                   0.012   nuclear pore complex-associated protein TPR 
CEP110                0.011   centrosomal protein 110kDa 
GOLGA4                0.011   golgi autoantigen, golgin subfamily a, 4 
NIN                   0.011   ninein isoform 2 
NIN                   0.011   ninein isoform 1 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 3 
CEP290                0.011   centrosomal protein 290kDa 
TCHH                  0.011   trichohyalin 
PLEC1                 0.010   plectin 1 isoform 11 
PLEC1                 0.010   plectin 1 isoform 10 
PLEC1                 0.010   plectin 1 isoform 8 
PLEC1                 0.010   plectin 1 isoform 7 
PLEC1                 0.010   plectin 1 isoform 6 
PLEC1                 0.010   plectin 1 isoform 3 
PLEC1                 0.010   plectin 1 isoform 2 
PLEC1                 0.010   plectin 1 isoform 1 
CROCC                 0.010   ciliary rootlet coiled-coil 
TRIP11                0.010   thyroid hormone receptor interactor 11 
EEA1                  0.009   early endosome antigen 1, 162kD 
LOC727832             0.009   golgi autoantigen, golgin subfamily a-like 
GCC2                  0.009   GRIP and coiled-coil domain-containing 2 
CLIP1                 0.009   restin isoform a 
CCDC88A               0.008   coiled-coil domain containing 88A isoform 2 
MYH10                 0.008   myosin, heavy polypeptide 10, non-muscle 
C10orf90              0.008   hypothetical protein LOC118611 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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