NFIB 37362

Name: NFIB	Sequence: fasta or formatted (420aa)		NCBI GI: 93004092
Description: nuclear factor I/B		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 17 2 C cysteine 1.4 6 2 D aspartate 5.2 22 1 E glutamate 5.0 21 2 F phenylalanine 3.6 15 1 G glycine 4.0 17 1 H histidine 3.8 16 3 I isoleucine 4.5 19 1 K lysine 6.7 28 2 L leucine 7.6 32 2 M methionine 2.1 9 2 N asparagine 2.9 12 1 P proline 12.1 51 4 Q glutamine 4.8 20 1 R arginine 5.5 23 2 S serine 11.4 48 2 T threonine 5.2 22 2 V valine 5.2 22 1 W tryptophan 1.2 5 1 Y tyrosine 3.6 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/B NFIC 0.592 nuclear factor I/C isoform 1 NFIA 0.561 nuclear factor I/A isoform 4 NFIC 0.561 nuclear factor I/C isoform 2 NFIA 0.561 nuclear factor I/A isoform 2 NFIA 0.561 nuclear factor I/A isoform 1 NFIA 0.539 nuclear factor I/A isoform 3 NFIX 0.520 nuclear factor I/X (CCAAT-binding transcription fact... CPEB3 0.025 cytoplasmic polyadenylation element binding protein ... EP300 0.025 E1A binding protein p300 PLEKHA4 0.022 pleckstrin homology domain containing family A memb... PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A POLR2A 0.022 DNA-directed RNA polymerase II A WIPF1 0.021 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.021 WAS/WASL interacting protein family, member 1 RBM12 0.021 RNA binding motif protein 12 RBM12 0.021 RNA binding motif protein 12 CCDC6 0.021 coiled-coil domain containing 6 WASF2 0.020 WAS protein family, member 2 MUC6 0.020 mucin 6, gastric FYB 0.020 FYN binding protein (FYB-120/130) isoform 2 FYB 0.020 FYN binding protein (FYB-120/130) isoform 1 MAST3 0.020 microtubule associated serine/threonine kinase 3 [H... MED14 0.020 mediator complex subunit 14 CNOT3 0.020 CCR4-NOT transcription complex, subunit 3 MLL2 0.019 myeloid/lymphoid or mixed-lineage leukemia 2 TJP1 0.019 tight junction protein 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.