NFIC 29807

Name: NFIC	Sequence: fasta or formatted (428aa)		NCBI GI: 45505149
Description: nuclear factor I/C isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [499aa] nuclear factor I/C isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 23 2 C cysteine 1.6 7 1 D aspartate 6.1 26 1 E glutamate 5.6 24 2 F phenylalanine 3.7 16 1 G glycine 6.1 26 2 H histidine 3.5 15 2 I isoleucine 3.3 14 1 K lysine 6.3 27 2 L leucine 8.9 38 2 M methionine 1.9 8 1 N asparagine 1.6 7 1 P proline 8.6 37 2 Q glutamine 4.2 18 2 R arginine 6.1 26 2 S serine 11.2 48 3 T threonine 6.3 27 2 V valine 5.8 25 2 W tryptophan 1.2 5 1 Y tyrosine 2.6 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/C isoform 1 NFIC 0.961 nuclear factor I/C isoform 2 NFIB 0.590 nuclear factor I/B NFIA 0.572 nuclear factor I/A isoform 4 NFIA 0.572 nuclear factor I/A isoform 2 NFIA 0.572 nuclear factor I/A isoform 1 NFIA 0.554 nuclear factor I/A isoform 3 NFIX 0.526 nuclear factor I/X (CCAAT-binding transcription fact... POLR2A 0.020 DNA-directed RNA polymerase II A EGR1 0.018 early growth response 1 CASKIN1 0.016 CASK interacting protein 1 FBRSL1 0.015 fibrosin-like 1 HDGF2 0.015 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.015 hepatoma-derived growth factor-related protein 2 iso... LOC100130716 0.014 PREDICTED: similar to mucin 11 LOC100130716 0.014 PREDICTED: similar to Mucin-12 SRRM2 0.014 splicing coactivator subunit SRm300 C2orf53 0.014 hypothetical protein LOC339779 ARHGEF5 0.013 rho guanine nucleotide exchange factor 5 TPR 0.012 nuclear pore complex-associated protein TPR MUC4 0.012 mucin 4 isoform a SUPT5H 0.012 suppressor of Ty 5 homolog isoform b SUPT5H 0.012 suppressor of Ty 5 homolog isoform a SUPT5H 0.012 suppressor of Ty 5 homolog isoform a SUPT5H 0.012 suppressor of Ty 5 homolog isoform a EYA4 0.012 eyes absent 4 isoform d EYA4 0.012 eyes absent 4 isoform a TNKS1BP1 0.012 tankyrase 1-binding protein 1 GPRIN1 0.012 G protein-regulated inducer of neurite outgrowth 1 ... NEDD9 0.011 neural precursor cell expressed, developmentally do... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.