Guide to the Human Genome
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Name: FYB Sequence: fasta or formatted (783aa) NCBI GI: 40788007
Description:

FYN binding protein (FYB-120/130) isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {829aa} FYN binding protein (FYB-120/130) isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         38           2
 C cysteine            0.5          4           2
 D aspartate           7.4         58           3
 E glutamate           8.3         65           3
 F phenylalanine       3.1         24           1
 G glycine             8.0         63           2
 H histidine           1.3         10           1
 I isoleucine          3.4         27           2
 K lysine             11.9         93           3
 L leucine             5.9         46           1
 M methionine          0.6          5           1
 N asparagine          4.2         33           2
 P proline            12.1         95           5
 Q glutamine           4.0         31           1
 R arginine            3.1         24           1
 S serine              9.2         72           3
 T threonine           5.2         41           2
 V valine              4.3         34           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FYN binding protein (FYB-120/130) isoform 2 
FYB                   0.986   FYN binding protein (FYB-120/130) isoform 1 
C1orf168              0.069   hypothetical protein LOC199920 
PRAM1                 0.044   PML-RARA regulated adaptor molecule 1 
PRB2                  0.033   proline-rich protein BstNI subfamily 2 
NACA                  0.032   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
PELP1                 0.028   proline, glutamic acid and leucine rich protein 1 [...
SETD1B                0.028   SET domain containing 1B 
ATN1                  0.027   atrophin-1 
ATN1                  0.027   atrophin-1 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
NEFH                  0.027   neurofilament, heavy polypeptide 200kDa 
WIPF1                 0.026   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.026   WAS/WASL interacting protein family, member 1 
COL5A1                0.025   alpha 1 type V collagen preproprotein 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
PCLO                  0.023   piccolo isoform 2 
PCLO                  0.023   piccolo isoform 1 
PRR12                 0.022   proline rich 12 
PRB1                  0.022   proline-rich protein BstNI subfamily 1 isoform 1 pre...
BAT2                  0.022   HLA-B associated transcript-2 
MAST4                 0.022   microtubule associated serine/threonine kinase fami...
ZNF828                0.021   zinc finger protein 828 
CHAF1A                0.021   chromatin assembly factor 1, subunit A (p150) 
RERE                  0.021   atrophin-1 like protein isoform b 
RERE                  0.021   atrophin-1 like protein isoform a 
RERE                  0.021   atrophin-1 like protein isoform a 
ZC3H4                 0.020   zinc finger CCCH-type containing 4 
CHD7                  0.020   chromodomain helicase DNA binding protein 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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