NFIA 14871

Name: NFIA	Sequence: fasta or formatted (554aa)		NCBI GI: 224465184
Description: nuclear factor I/A isoform 4		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [509aa] nuclear factor I/A isoform 1 alt prot [501aa] nuclear factor I/A isoform 3 alt prot [498aa] nuclear factor I/A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 28 2 C cysteine 1.8 10 2 D aspartate 3.8 21 1 E glutamate 5.1 28 3 F phenylalanine 4.0 22 1 G glycine 6.3 35 2 H histidine 2.7 15 2 I isoleucine 2.5 14 2 K lysine 5.2 29 2 L leucine 7.0 39 2 M methionine 2.2 12 1 N asparagine 1.8 10 1 P proline 12.8 71 7 Q glutamine 5.4 30 2 R arginine 5.6 31 2 S serine 12.3 68 3 T threonine 6.5 36 2 V valine 6.1 34 1 W tryptophan 1.3 7 1 Y tyrosine 2.5 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/A isoform 4 NFIA 0.911 nuclear factor I/A isoform 1 NFIA 0.894 nuclear factor I/A isoform 3 NFIA 0.844 nuclear factor I/A isoform 2 NFIX 0.513 nuclear factor I/X (CCAAT-binding transcription fact... NFIC 0.489 nuclear factor I/C isoform 2 NFIC 0.433 nuclear factor I/C isoform 1 NFIB 0.424 nuclear factor I/B POLR2A 0.033 DNA-directed RNA polymerase II A WASF1 0.030 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.030 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.030 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.030 Wiskott-Aldrich syndrome protein family member 1 [Hom... FLJ22184 0.027 PREDICTED: hypothetical protein LOC80164 RERE 0.024 atrophin-1 like protein isoform b RERE 0.024 atrophin-1 like protein isoform a RERE 0.024 atrophin-1 like protein isoform a LOC284297 0.024 hypothetical protein LOC284297 FLJ22184 0.023 PREDICTED: hypothetical protein FLJ22184 SF1 0.023 splicing factor 1 isoform 3 SF1 0.023 splicing factor 1 isoform 2 SF1 0.023 splicing factor 1 isoform 1 LOC100133756 0.023 PREDICTED: hypothetical protein, partial RAPH1 0.022 Ras association and pleckstrin homology domains 1 is... IQSEC2 0.022 IQ motif and Sec7 domain 2 isoform1 PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A EP300 0.021 E1A binding protein p300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.