Guide to the Human Genome
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Name: CACYBP Sequence: fasta or formatted (228aa) NCBI GI: 7656952
Description:

calcyclin binding protein isoform 1

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [185aa] calcyclin binding protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         10           2
 C cysteine            0.9          2           1
 D aspartate           6.6         15           3
 E glutamate          10.5         24           2
 F phenylalanine       1.8          4           1
 G glycine             3.5          8           1
 H histidine           0.9          2           1
 I isoleucine          4.8         11           1
 K lysine             14.5         33           2
 L leucine             7.9         18           2
 M methionine          2.2          5           1
 N asparagine          4.8         11           2
 P proline             2.6          6           1
 Q glutamine           3.9          9           2
 R arginine            3.5          8           1
 S serine              6.1         14           2
 T threonine           7.9         18           2
 V valine              8.8         20           2
 W tryptophan          1.3          3           1
 Y tyrosine            3.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcyclin binding protein isoform 1 
CACYBP                0.817   calcyclin binding protein isoform 2 
SUGT1                 0.070   suppressor of G2 allele of SKP1 isoform a 
SUGT1                 0.070   suppressor of G2 allele of SKP1 isoform b 
DDX27                 0.023   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
CYLC2                 0.021   cylicin 2 
CENPH                 0.021   centromere protein H 
MAP7D2                0.019   MAP7 domain containing 2 
CALCOCO1              0.016   coiled-coil transcriptional coactivator isoform 2 [...
CALCOCO1              0.016   coiled-coil transcriptional coactivator isoform 1 [H...
DYX1C1                0.016   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.016   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.016   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
MYO10                 0.016   myosin X 
BAZ2B                 0.016   bromodomain adjacent to zinc finger domain, 2B [Homo...
RUFY2                 0.016   RUN and FYVE domain-containing 2 isoform a 
PPP1R9A               0.014   protein phosphatase 1, regulatory (inhibitor) subuni...
SETX                  0.014   senataxin 
NUPL1                 0.014   nucleoporin like 1 isoform b 
NUPL1                 0.014   nucleoporin like 1 isoform a 
SH2D4B                0.014   SH2 domain containing 4B isoform 2 
SH2D4B                0.014   SH2 domain containing 4B isoform 1 
HSF2                  0.012   heat shock transcription factor 2 isoform b 
DNAH1                 0.012   dynein, axonemal, heavy chain 1 
DSP                   0.012   desmoplakin isoform II 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 1 
CYB5R4                0.012   cytochrome b5 reductase 4 
TPR                   0.012   nuclear pore complex-associated protein TPR 
MYH7B                 0.012   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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