CALCOCO1 3727

Name: CALCOCO1	Sequence: fasta or formatted (691aa)		NCBI GI: 14149742
Description: coiled-coil transcriptional coactivator isoform 1		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [606aa] coiled-coil transcriptional coactivator isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 61 4 C cysteine 1.2 8 1 D aspartate 5.4 37 2 E glutamate 13.2 91 2 F phenylalanine 2.3 16 3 G glycine 5.1 35 2 H histidine 1.9 13 2 I isoleucine 2.5 17 1 K lysine 5.6 39 1 L leucine 11.4 79 3 M methionine 1.6 11 1 N asparagine 1.7 12 1 P proline 4.9 34 2 Q glutamine 7.7 53 2 R arginine 5.9 41 1 S serine 8.0 55 3 T threonine 5.1 35 2 V valine 5.5 38 2 W tryptophan 0.9 6 1 Y tyrosine 1.4 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil transcriptional coactivator isoform 1 [H... CALCOCO1 0.824 coiled-coil transcriptional coactivator isoform 2 [... TAX1BP1 0.191 Tax1 (human T-cell leukemia virus type I) binding p... TAX1BP1 0.188 Tax1 (human T-cell leukemia virus type I) binding pr... CALCOCO2 0.078 calcium binding and coiled-coil domain 2 PLEC1 0.053 plectin 1 isoform 11 PLEC1 0.053 plectin 1 isoform 10 PLEC1 0.053 plectin 1 isoform 8 PLEC1 0.053 plectin 1 isoform 7 PLEC1 0.053 plectin 1 isoform 6 PLEC1 0.053 plectin 1 isoform 3 PLEC1 0.053 plectin 1 isoform 2 PLEC1 0.053 plectin 1 isoform 1 CCDC136 0.051 coiled-coil domain containing 136 MYH7B 0.050 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH9 0.049 myosin, heavy polypeptide 9, non-muscle MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC283767 0.047 golgi autoantigen, golgin subfamily a-like EEA1 0.047 early endosome antigen 1, 162kD CGNL1 0.046 cingulin-like 1 MYH1 0.046 myosin, heavy chain 1, skeletal muscle, adult [Homo... LOC440243 0.045 PREDICTED: Putative golgin subfamily A member 6-lik... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... LOC645202 0.044 PREDICTED: hypothetical protein LOC645202 CEP250 0.044 centrosomal protein 2 RNF20 0.044 ring finger protein 20 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.