Guide to the Human Genome
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Name: CACYBP Sequence: fasta or formatted (185aa) NCBI GI: 60218913
Description:

calcyclin binding protein isoform 2

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [228aa] calcyclin binding protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          6           2
 C cysteine            1.1          2           1
 D aspartate           7.0         13           3
 E glutamate           8.6         16           1
 F phenylalanine       2.2          4           1
 G glycine             4.3          8           1
 H histidine           1.1          2           1
 I isoleucine          4.9          9           1
 K lysine             13.5         25           2
 L leucine             7.0         13           2
 M methionine          2.2          4           1
 N asparagine          5.4         10           2
 P proline             3.2          6           1
 Q glutamine           4.3          8           2
 R arginine            2.7          5           1
 S serine              6.5         12           2
 T threonine           8.1         15           2
 V valine              9.2         17           2
 W tryptophan          1.6          3           1
 Y tyrosine            3.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcyclin binding protein isoform 2 
CACYBP                1.000   calcyclin binding protein isoform 1 
SUGT1                 0.086   suppressor of G2 allele of SKP1 isoform a 
SUGT1                 0.086   suppressor of G2 allele of SKP1 isoform b 
DDX27                 0.029   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DYX1C1                0.020   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.020   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.020   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
SETX                  0.017   senataxin 
HSF2                  0.014   heat shock transcription factor 2 isoform b 
DOPEY2                0.011   pad-1-like 
LOC283685             0.009   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC652725             0.009   PREDICTED: similar to neuron navigator 3, partial [...
CYB5R4                0.009   cytochrome b5 reductase 4 
TPR                   0.009   nuclear pore complex-associated protein TPR 
NAV3                  0.009   neuron navigator 3 
FBXW10                0.009   F-box and WD-40 domain protein 10 
ASAP3                 0.009   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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