Guide to the Human Genome
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Name: DYX1C1 Sequence: fasta or formatted (420aa) NCBI GI: 75677570
Description:

dyslexia susceptibility 1 candidate 1 isoform a

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [376aa] dyslexia susceptibility 1 candidate 1 isoform b
alt prot [381aa] dyslexia susceptibility 1 candidate 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         43           3
 C cysteine            1.4          6           1
 D aspartate           4.3         18           2
 E glutamate          11.7         49           4
 F phenylalanine       2.9         12           1
 G glycine             2.1          9           1
 H histidine           1.0          4           1
 I isoleucine          5.7         24           1
 K lysine             12.1         51           2
 L leucine             9.5         40           2
 M methionine          2.6         11           2
 N asparagine          5.5         23           2
 P proline             3.6         15           2
 Q glutamine           4.3         18           2
 R arginine            5.7         24           2
 S serine              4.5         19           2
 T threonine           4.5         19           1
 V valine              4.3         18           1
 W tryptophan          1.2          5           1
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dyslexia susceptibility 1 candidate 1 isoform a [Hom... 
DYX1C1                0.832   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.829   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
SPAG1                 0.056   sperm associated antigen 1 
SPAG1                 0.056   sperm associated antigen 1 
SGTB                  0.052   small glutamine-rich tetratricopeptide repeat (TPR)-...
SGTA                  0.052   small glutamine-rich tetratricopeptide 
UNC45A                0.047   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.047   smooth muscle cell associated protein-1 isoform 2 [H...
RPAP3                 0.046   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.046   RNA polymerase II associated protein 3 isoform 1 [H...
STIP1                 0.046   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
EIF5B                 0.044   eukaryotic translation initiation factor 5B 
RPAP3                 0.042   RNA polymerase II associated protein 3 isoform 3 [H...
UNC45B                0.041   cardiomyopathy associated 4 isoform 2 
UNC45B                0.041   cardiomyopathy associated 4 isoform 1 
STUB1                 0.040   STIP1 homology and U-box containing protein 1 
DNAJC2                0.040   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
TOMM34                0.040   translocase of outer mitochondrial membrane 34 [Homo...
PPP5C                 0.039   protein phosphatase 5, catalytic subunit 
SFRS17A               0.039   DNA segment on chromosome X and Y (unique) 155 expre...
CALD1                 0.039   caldesmon 1 isoform 1 
LOC100133758          0.037   PREDICTED: hypothetical protein, partial 
SFRS12                0.037   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.037   splicing factor, arginine/serine-rich 12 isoform b [...
DNAJC7                0.036   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
UPF3B                 0.036   UPF3 regulator of nonsense transcripts homolog B iso...
INCENP                0.036   inner centromere protein antigens 135/155kDa isofor...
TTC12                 0.036   tetratricopeptide repeat domain 12 
LRRIQ1                0.036   leucine-rich repeats and IQ motif containing 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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