| Name: TPR | Sequence: fasta or formatted (2363aa) | NCBI GI: 114155142 | |
|
Description: nuclear pore complex-associated protein TPR
|
Referenced in:
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.2 146 3 C cysteine 0.3 7 1 D aspartate 5.0 119 5 E glutamate 13.8 325 4 F phenylalanine 1.0 24 2 G glycine 3.9 92 3 H histidine 1.8 43 1 I isoleucine 3.6 84 2 K lysine 7.4 176 3 L leucine 10.0 236 3 M methionine 1.9 46 1 N asparagine 3.9 93 2 P proline 3.4 80 2 Q glutamine 9.3 220 3 R arginine 6.0 141 2 S serine 8.4 198 4 T threonine 7.0 166 3 V valine 5.9 139 2 W tryptophan 0.1 3 1 Y tyrosine 1.1 25 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 nuclear pore complex-associated protein TPR GOLGA4 0.048 golgi autoantigen, golgin subfamily a, 4 CEP250 0.048 centrosomal protein 2 CENPE 0.047 centromere protein E TCHH 0.044 trichohyalin GOLGB1 0.042 golgi autoantigen, golgin subfamily b, macrogolgin ... NUMA1 0.040 nuclear mitotic apparatus protein 1 EEA1 0.040 early endosome antigen 1, 162kD PLEC1 0.040 plectin 1 isoform 11 PLEC1 0.040 plectin 1 isoform 10 PLEC1 0.040 plectin 1 isoform 8 PLEC1 0.040 plectin 1 isoform 7 PLEC1 0.040 plectin 1 isoform 6 PLEC1 0.040 plectin 1 isoform 3 PLEC1 0.040 plectin 1 isoform 2 PLEC1 0.040 plectin 1 isoform 1 TRIP11 0.039 thyroid hormone receptor interactor 11 CEP290 0.039 centrosomal protein 290kDa GCC2 0.039 GRIP and coiled-coil domain-containing 2 MYH9 0.036 myosin, heavy polypeptide 9, non-muscle CENPF 0.036 centromere protein F AKAP9 0.035 A-kinase anchor protein 9 isoform 3 AKAP9 0.035 A-kinase anchor protein 9 isoform 2 CCDC88A 0.034 coiled-coil domain containing 88A isoform 1 CCDC88A 0.034 coiled-coil domain containing 88A isoform 2 MYH10 0.034 myosin, heavy polypeptide 10, non-muscle CROCC 0.034 ciliary rootlet coiled-coil MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
