Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPP1R9A Sequence: fasta or formatted (1098aa) NCBI GI: 93204861
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 9A

Referenced in:

Additional Interaction Domain Families
PDZ Domain
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         65           2
 C cysteine            0.5          5           1
 D aspartate           6.4         70           3
 E glutamate          11.7        129           4
 F phenylalanine       2.6         28           1
 G glycine             5.9         65           2
 H histidine           1.5         16           1
 I isoleucine          3.2         35           2
 K lysine              8.3         91           3
 L leucine             7.4         81           2
 M methionine          2.1         23           1
 N asparagine          4.8         53           5
 P proline             3.9         43           2
 Q glutamine           6.4         70           2
 R arginine            5.4         59           2
 S serine             10.3        113           2
 T threonine           5.5         60           2
 V valine              5.5         60           2
 W tryptophan          0.6          7           1
 Y tyrosine            2.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
PPP1R9B               0.294   protein phosphatase 1, regulatory subunit 9B 
SAMD14                0.051   sterile alpha motif domain containing 14 
MPDZ                  0.025   multiple PDZ domain protein 
PDZD2                 0.022   PDZ domain containing 2 
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
INADL                 0.021   InaD-like 
PTPN13                0.020   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.020   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.020   protein tyrosine phosphatase, non-receptor type 13 is...
PARD3                 0.018   partitioning-defective protein 3 homolog 
PTPN13                0.018   protein tyrosine phosphatase, non-receptor type 13 i...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LEKR1                 0.017   leucine, glutamate and lysine rich 1 
MAGI3                 0.016   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.016   membrane-associated guanylate kinase-related  3 iso...
SLMAP                 0.016   sarcolemma associated protein 
CENPE                 0.016   centromere protein E 
DLG2                  0.016   chapsyn-110 isoform 3 
DLG2                  0.016   chapsyn-110 isoform 1 
DLG2                  0.016   chapsyn-110 isoform 2 
PARD3B                0.016   par-3 partitioning defective 3 homolog B isoform a ...
PARD3B                0.016   par-3 partitioning defective 3 homolog B isoform c ...
MAGI2                 0.016   membrane associated guanylate kinase, WW and PDZ dom...
DLG4                  0.015   post-synaptic density protein 95 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press