COL19A1 30899

Name: COL19A1	Sequence: fasta or formatted (1142aa)		NCBI GI: 47778921
Description: alpha 1 type XIX collagen precursor		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 52 2 C cysteine 1.2 14 2 D aspartate 4.3 49 1 E glutamate 5.9 67 2 F phenylalanine 2.2 25 1 G glycine 22.9 261 2 H histidine 1.4 16 1 I isoleucine 5.0 57 2 K lysine 6.7 77 2 L leucine 6.2 71 2 M methionine 1.6 18 1 N asparagine 2.6 30 1 P proline 15.1 173 2 Q glutamine 4.0 46 2 R arginine 4.1 47 2 S serine 4.6 53 2 T threonine 2.6 30 1 V valine 2.9 33 2 W tryptophan 0.6 7 1 Y tyrosine 1.4 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 1 type XIX collagen precursor COL22A1 0.304 collagen, type XXII, alpha 1 COL16A1 0.295 alpha 1 type XVI collagen precursor LOC100293055 0.273 PREDICTED: similar to COL22A1 protein COL4A5 0.259 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.259 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.259 type IV collagen alpha 5 isoform 3 precursor COL3A1 0.252 collagen type III alpha 1 preproprotein COL5A1 0.252 alpha 1 type V collagen preproprotein COL4A1 0.248 alpha 1 type IV collagen preproprotein COL11A2 0.248 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.248 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.248 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.247 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.247 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.247 alpha 1 type XI collagen isoform A preproprotein [Ho... COL2A1 0.244 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.244 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A3 0.243 collagen, type V, alpha 3 preproprotein COL4A3 0.243 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.243 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.243 alpha 3 type IV collagen isoform 1 precursor COL7A1 0.242 alpha 1 type VII collagen precursor COL1A1 0.240 alpha 1 type I collagen preproprotein COL4A3 0.237 alpha 3 type IV collagen isoform 5 precursor COL5A2 0.236 alpha 2 type V collagen preproprotein COL4A4 0.235 alpha 4 type IV collagen precursor COL27A1 0.234 collagen, type XXVII, alpha 1 COL4A2 0.234 alpha 2 type IV collagen preproprotein COL1A2 0.225 alpha 2 type I collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.