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Search of human proteins with 13491168
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13491168 pumilio homolog 2 [Homo sapiens]
(1064 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13491168 pumilio homolog 2 [Homo sapiens] 2121 0.0
gi|13491166 pumilio 1 isoform 2 [Homo sapiens] 1608 0.0
gi|66932909 pumilio 1 isoform 1 [Homo sapiens] 1603 0.0
gi|109948283 KIAA0020 protein [Homo sapiens] 69 2e-11
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 65 4e-10
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 58 5e-08
gi|57864582 hornerin [Homo sapiens] 55 4e-07
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 53 1e-06
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 53 1e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 53 2e-06
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 51 5e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 51 5e-06
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 51 7e-06
gi|126352608 elastin isoform e precursor [Homo sapiens] 50 1e-05
gi|126352446 elastin isoform d precursor [Homo sapiens] 50 1e-05
gi|126352322 elastin isoform c precursor [Homo sapiens] 50 1e-05
gi|126352700 elastin isoform b precursor [Homo sapiens] 50 1e-05
gi|126352440 elastin isoform a precursor [Homo sapiens] 50 1e-05
gi|194097341 period 1 [Homo sapiens] 50 1e-05
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 50 1e-05
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 50 1e-05
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 49 2e-05
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 49 3e-05
gi|31543543 retinoic acid induced 17 [Homo sapiens] 48 4e-05
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 48 4e-05
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 48 4e-05
gi|33188461 GATA binding protein 4 [Homo sapiens] 47 7e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens] 47 1e-04
gi|89276766 trophinin isoform 5 [Homo sapiens] 46 2e-04
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 46 2e-04
>gi|13491168 pumilio homolog 2 [Homo sapiens]
Length = 1064
Score = 2121 bits (5496), Expect = 0.0
Identities = 1064/1064 (100%), Positives = 1064/1064 (100%)
Query: 1 MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQP 60
MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQP
Sbjct: 1 MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQP 60
Query: 61 IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTRD 120
IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTRD
Sbjct: 61 IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTRD 120
Query: 121 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ 180
AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ
Sbjct: 121 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ 180
Query: 181 ASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYP 240
ASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYP
Sbjct: 181 ASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYP 240
Query: 241 GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSA 300
GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSA
Sbjct: 241 GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSA 300
Query: 301 GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ 360
GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ
Sbjct: 301 GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ 360
Query: 361 QAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLA 420
QAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLA
Sbjct: 361 QAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLA 420
Query: 421 FGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAA 480
FGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAA
Sbjct: 421 FGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAA 480
Query: 481 AAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFS 540
AAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFS
Sbjct: 481 AAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFS 540
Query: 541 HGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSS 600
HGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSS
Sbjct: 541 HGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSS 600
Query: 601 SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSG 660
SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSG
Sbjct: 601 SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSG 660
Query: 661 RYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFP 720
RYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFP
Sbjct: 661 RYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFP 720
Query: 721 NLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVI 780
NLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVI
Sbjct: 721 NLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVI 780
Query: 781 QKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVL 840
QKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVL
Sbjct: 781 QKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVL 840
Query: 841 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQT 900
KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQT
Sbjct: 841 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQT 900
Query: 901 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVV 960
LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVV
Sbjct: 901 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVV 960
Query: 961 EKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMH 1020
EKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMH
Sbjct: 961 EKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMH 1020
Query: 1021 KIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML 1064
KIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML
Sbjct: 1021 KIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML 1064
>gi|13491166 pumilio 1 isoform 2 [Homo sapiens]
Length = 1186
Score = 1608 bits (4165), Expect = 0.0
Identities = 837/1074 (77%), Positives = 913/1074 (85%), Gaps = 25/1074 (2%)
Query: 1 MNHDFQALALESRGMGE-LLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQ 59
+NHDFQALALE R MGE LLP KKFWE D+S+KDG KGIFLGD +WR++AWG S HS+SQ
Sbjct: 128 LNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGD-QWRDSAWGTSDHSVSQ 186
Query: 60 PIMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTR 119
PIMVQRR GQ FH NSEVN++LSPRSESGGLGVSMVEYVLSSSP D S RKG FG R
Sbjct: 187 PIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGD---SCLRKGGFGPR 243
Query: 120 DAETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSR 179
DA++D +KG++K K + F+ D+ DLK+ D K NG + NG+DAD KDF+RTPG+
Sbjct: 244 DADSDENDKGEKKNKGT-FDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNC 302
Query: 180 QASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQN--LDAMEQVGLESLQF 237
Q S EV + LGPN N SEGL L + KP VE+FSN E+Q+ LD ME VG+E LQF
Sbjct: 303 QNSANEV-DLLGPNQNGSEGLAQLTSTNGAKP-VEDFSNMESQSVPLDPMEHVGMEPLQF 360
Query: 238 DYPGNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGV 297
DY G QVP+DS+ ATVGLFDYNSQQQLFQR NAL VQQLTAAQQQQYALAAA QPHI
Sbjct: 361 DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHI--- 417
Query: 298 FSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGV-PWGVYPAN 356
GLAPAAFVPNPYIISAAPPGTDPYTA GLAAAATL GPAVVP QYYGV PWGVYPA+
Sbjct: 418 ---GLAPAAFVPNPYIISAAPPGTDPYTA-GLAAAATL-GPAVVPHQYYGVTPWGVYPAS 472
Query: 357 LFQQQAAAAA--NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAA 414
LFQQQAAAAA N+A+QQ QAQ GQQQVLR GA QRPLTPNQ QQGQQ + L AAAA
Sbjct: 473 LFQQQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAA 532
Query: 415 ANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSA 474
N LAFGQGLA GMPGY VLAP AYYDQTGALVV GAR GLGAPVRL+AP PV+ISS+
Sbjct: 533 VNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSS 592
Query: 475 AAQAA---AAAAAGGTASSLTGSTNGLFRPIGTQPPQQQ-QQQPSTNLQSNSFYGSSSLT 530
AAQAA AAA+A G A L G+TNG FRP+GTQ PQ Q QQQP+ NL S+SFYG++SL
Sbjct: 593 AAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNNNLASSSFYGNNSLN 652
Query: 531 NSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLST 590
++SQSSSLFS G QP +TSLGFGS +SLGA +GSAL GFG++V +S + S +RR+SL+
Sbjct: 653 SNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTG 712
Query: 591 SSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSL 650
SSDLYKR+SSSL PIG FYN L FSSSP P+GMPLPSQ PGHS TPPPSLSSHGSSSSL
Sbjct: 713 SSDLYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSL 772
Query: 651 HLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRL 710
+LGGLTNGSGRYISAAPGAEAKYRSASS SSLFS SS LF SRLRY SD+MPSGRSRL
Sbjct: 773 NLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRL 832
Query: 711 LEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQL 770
LEDFRNNR+PNLQLR++ GHI+EFSQDQHGSRFIQ KLERATPAERQ+VFNEILQAAYQL
Sbjct: 833 LEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQL 892
Query: 771 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSE 830
M DVFGNYVIQKFFEFGSL+QKLALA RIRGHVL LALQMYGCRVIQKALE I SDQQ+E
Sbjct: 893 MVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNE 952
Query: 831 MVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQR 890
MV+ELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVF LSTHPYGCRVIQR
Sbjct: 953 MVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQR 1012
Query: 891 ILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 950
ILEHC +QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIV+EIRG VL L
Sbjct: 1013 ILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 951 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1010
SQHKFASNVVEKCVTHASR ERA+LIDEVC NDGPHSALYTMMKDQYANYVVQKMID+A
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 1011 EPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML 1064
EP QRKI+MHKIRPHI TLRKYTYGKHILAKLEKYY+KN DLGPI GPPNG++
Sbjct: 1133 EPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII 1186
>gi|66932909 pumilio 1 isoform 1 [Homo sapiens]
Length = 1188
Score = 1603 bits (4152), Expect = 0.0
Identities = 837/1076 (77%), Positives = 913/1076 (84%), Gaps = 27/1076 (2%)
Query: 1 MNHDFQALALESRGMGE-LLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQ 59
+NHDFQALALE R MGE LLP KKFWE D+S+KDG KGIFLGD +WR++AWG S HS+SQ
Sbjct: 128 LNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGD-QWRDSAWGTSDHSVSQ 186
Query: 60 PIMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTR 119
PIMVQRR GQ FH NSEVN++LSPRSESGGLGVSMVEYVLSSSP D S RKG FG R
Sbjct: 187 PIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGD---SCLRKGGFGPR 243
Query: 120 DAETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSR 179
DA++D +KG++K K + F+ D+ DLK+ D K NG + NG+DAD KDF+RTPG+
Sbjct: 244 DADSDENDKGEKKNKGT-FDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNC 302
Query: 180 QASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQN--LDAMEQVGLESLQF 237
Q S EV + LGPN N SEGL L + KP VE+FSN E+Q+ LD ME VG+E LQF
Sbjct: 303 QNSANEV-DLLGPNQNGSEGLAQLTSTNGAKP-VEDFSNMESQSVPLDPMEHVGMEPLQF 360
Query: 238 DYPGNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGV 297
DY G QVP+DS+ ATVGLFDYNSQQQLFQR NAL VQQLTAAQQQQYALAAA QPHI
Sbjct: 361 DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHI--- 417
Query: 298 FSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGV-PWGVYPAN 356
GLAPAAFVPNPYIISAAPPGTDPYTA GLAAAATL GPAVVP QYYGV PWGVYPA+
Sbjct: 418 ---GLAPAAFVPNPYIISAAPPGTDPYTA-GLAAAATL-GPAVVPHQYYGVTPWGVYPAS 472
Query: 357 LFQQQAAAAA--NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAA 414
LFQQQAAAAA N+A+QQ QAQ GQQQVLR GA QRPLTPNQ QQGQQ + L AAAA
Sbjct: 473 LFQQQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAA 532
Query: 415 ANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSA 474
N LAFGQGLA GMPGY VLAP AYYDQTGALVV GAR GLGAPVRL+AP PV+ISS+
Sbjct: 533 VNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSS 592
Query: 475 AAQAA---AAAAAGGTASSLTGSTNGLFRPIGTQPPQQQ-QQQPSTNLQSNSFYGSSSLT 530
AAQAA AAA+A G A L G+TNG FRP+GTQ PQ Q QQQP+ NL S+SFYG++SL
Sbjct: 593 AAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNNNLASSSFYGNNSLN 652
Query: 531 NSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLST 590
++SQSSSLFS G QP +TSLGFGS +SLGA +GSAL GFG++V +S + S +RR+SL+
Sbjct: 653 SNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTG 712
Query: 591 SSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSL 650
SSDLYKR+SSSL PIG FYN L FSSSP P+GMPLPSQ PGHS TPPPSLSSHGSSSSL
Sbjct: 713 SSDLYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSL 772
Query: 651 HLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRL 710
+LGGLTNGSGRYISAAPGAEAKYRSASS SSLFS SS LF SRLRY SD+MPSGRSRL
Sbjct: 773 NLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRL 832
Query: 711 LEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQL 770
LEDFRNNR+PNLQLR++ GHI+EFSQDQHGSRFIQ KLERATPAERQ+VFNEILQAAYQL
Sbjct: 833 LEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQL 892
Query: 771 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQ-- 828
M DVFGNYVIQKFFEFGSL+QKLALA RIRGHVL LALQMYGCRVIQKALE I SDQQ
Sbjct: 893 MVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVI 952
Query: 829 SEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVI 888
+EMV+ELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVF LSTHPYGCRVI
Sbjct: 953 NEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVI 1012
Query: 889 QRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 948
QRILEHC +QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIV+EIRG VL
Sbjct: 1013 QRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 949 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 1008
LSQHKFASNVVEKCVTHASR ERA+LIDEVC NDGPHSALYTMMKDQYANYVVQKMID
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 1009 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML 1064
+AEP QRKI+MHKIRPHI TLRKYTYGKHILAKLEKYY+KN DLGPI GPPNG++
Sbjct: 1133 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII 1188
>gi|109948283 KIAA0020 protein [Homo sapiens]
Length = 648
Score = 69.3 bits (168), Expect = 2e-11
Identities = 64/310 (20%), Positives = 135/310 (43%), Gaps = 28/310 (9%)
Query: 732 VEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQ 791
+ F+ D +R IQ ++ +R+ F E+ +L + +++KF +GS Q
Sbjct: 173 IAFAHDS--TRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMYGSKPQ 230
Query: 792 KLALATRIRGHVLPLALQMYGCRVIQKAL-ESISSDQQSEMVKELDGHVLKCVKDQNGNH 850
+ +GHV + +++ A + +Q++ + +EL G+ + K + +
Sbjct: 231 IAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSAD-HR 289
Query: 851 VVQKCIECVQPQSLQFIIDAFK------GQVFVLSTHPYGCRVIQRILEHCTAEQTLPIL 904
+ K +E VQP+ L+ I+D K Q + H +V + + ++
Sbjct: 290 TLDKVLE-VQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMI 348
Query: 905 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVV---E 961
E + + L G V H L HG P+D+ IV ++ V ++ +++ V+
Sbjct: 349 EAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAF 408
Query: 962 KCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHK 1021
C+ ++ + ++I E+ S+L +++ D+Y V+ ++ +PA H
Sbjct: 409 DCIDD-TKLVKQIIISEII-------SSLPSIVNDKYGRKVLLYLLSPRDPA------HT 454
Query: 1022 IRPHITTLRK 1031
+R I L+K
Sbjct: 455 VREIIEVLQK 464
Score = 45.8 bits (107), Expect = 2e-04
Identities = 55/287 (19%), Positives = 118/287 (41%), Gaps = 50/287 (17%)
Query: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIEC 858
I+G + +A RVIQ ++ + +Q+ + +EL +++ K + ++V+K +
Sbjct: 166 IQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMY 225
Query: 859 VQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL-EHCTAEQTLPILEELHQHTEQ---- 913
+ II +FKG V + H +++ + EQ + EEL+ +T Q
Sbjct: 226 GSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKS 285
Query: 914 ------------------LVQDQYGNY---------VIQHVLEH---------GRPEDKS 937
L+ D+ VI+H L H P+ +S
Sbjct: 286 ADHRTLDKVLEVQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRS 345
Query: 938 KIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQ 997
+++ IR V+ L+ + V C+ H + +R +++ + + + + Q
Sbjct: 346 EMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTM-------KTYVEKVANGQ 398
Query: 998 YANYVVQKMIDMAEPAQ--RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
Y++ V+ D + + ++II+ +I + ++ YG+ +L L
Sbjct: 399 YSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYL 445
Score = 41.6 bits (96), Expect = 0.004
Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 12/187 (6%)
Query: 857 ECVQPQSLQFIIDAFK---GQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQ 913
+C + + ++ + D K G++ ++ RVIQ +++ EQ EEL +
Sbjct: 149 DCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVE 208
Query: 914 LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERA 973
L + +Y +++ L +G ++I+ +G V + +H AS +VE + E+
Sbjct: 209 LSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQR 268
Query: 974 LLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTL-RKY 1032
++ E N T + A++ + +P + ++IM +++ +T + +K
Sbjct: 269 NMLTEELYGN--------TFQLYKSADHRTLDKVLEVQPEKLELIMDEMKQILTPMAQKE 320
Query: 1033 TYGKHIL 1039
KH L
Sbjct: 321 AVIKHSL 327
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 64.7 bits (156), Expect = 4e-10
Identities = 112/450 (24%), Positives = 164/450 (36%), Gaps = 69/450 (15%)
Query: 275 QLTAAQQQQYALAAAQQPHI------------AGVFSAGLAPAAFVPNPYIISAAPPGTD 322
++ AA LA+A+ P I A + LA P ++ A P T
Sbjct: 2231 RIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTP 2290
Query: 323 PYTAAGLAAAATLAGPAVVPPQYYGVPWGV--YPANLFQQQAAAAANNTASQQAASQAQP 380
A LA A T A A + G P YP++ QA A+AN + A + A
Sbjct: 2291 TAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPV 2350
Query: 381 GQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAY 440
A A L P + A +L+ A +P + P +
Sbjct: 2351 NIAGSRTAAA----LAPASLTSARMAPALSGANLTSPRV-----------------PLSA 2389
Query: 441 YDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS--TNGL 498
Y++ RT R + TP SA +Q+ + + SS G + L
Sbjct: 2390 YERVSG-------RTSPPLLDRARSRTP---PSAPSQSRMTSERAPSPSSRMGQAPSQSL 2439
Query: 499 FRPIGTQPPQQ-----QQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHG----------P 543
P QP Q Q+ GS SL++ + +++ S G P
Sbjct: 2440 LPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAP 2499
Query: 544 GQPGS------TSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKR 597
G P S S G ++L AA+ A SS SS+SSS++ S S+SS
Sbjct: 2500 GVPHSDVGEPPASTGAQQPSAL-AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGS 2558
Query: 598 SSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTN 657
SSS P + PSP P + G P P+ SSSS ++
Sbjct: 2559 SSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSS 2618
Query: 658 GSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
S S++ + + S+SS+SS SSSS
Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Score = 33.9 bits (76), Expect = 0.84
Identities = 47/207 (22%), Positives = 72/207 (34%), Gaps = 14/207 (6%)
Query: 506 PPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGS 565
P Q+ Q P + +S + S T +S S S P Q T +S +
Sbjct: 786 PKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSR--QSHSSSSPHPK 843
Query: 566 ALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMP 625
SG GS S A + ++ S P +S SS P
Sbjct: 844 VKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSST 903
Query: 626 LPSQTPGHSLTPPPSLS--------SHGSSSSLHLGGLTNGS----GRYISAAPGAEAKY 673
P Q+P S +P P + SH SSS +T+ + R +S E++
Sbjct: 904 PPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRL 963
Query: 674 RSASSTSSLFSSSSQLFPPSRLRYNRS 700
S S S +++ P + R + S
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHS 990
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 57.8 bits (138), Expect = 5e-08
Identities = 115/439 (26%), Positives = 163/439 (37%), Gaps = 77/439 (17%)
Query: 298 FSAGLAPAAFVPNPYIISAAPPGTDPYTAAG-LAAAATLAGPAVVPPQ-YYGVPWGVYP- 354
FS+G A AA P P PP TA G L +LA + VP + P+ P
Sbjct: 356 FSSGGAAAAAAPAP------PPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPT 409
Query: 355 -----ANLFQQQAAAAANNTASQQAAS--------QAQPGQQQVLRAGAGQRPLTPNQGQ 401
A + A+A+ T + A A PG+ GA P TP
Sbjct: 410 PPTTTAEIATASASASTTTTVTAVTAEVDLFGDAFAASPGEAPAASEGAAA-PATPTP-- 466
Query: 402 QGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPV 461
+ A + N A +G A P + A +T VV P A T P
Sbjct: 467 ----VAAALDACSGNDPFAPSEGSAEAAPELDLFAMKP--PETSVPVVTPTASTAPPVPA 520
Query: 462 RLMAPTPVLISSAAAQAAAAAAA--GGTASSLTGSTN----GLFRPIGTQPPQ-----QQ 510
+P P + ++AAA AA AAA T S+ T +T +F + P+ +
Sbjct: 521 TAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAPPALDIFGDLFESTPEVAAAPKP 580
Query: 511 QQQPSTNLQSNSFY-----GSSSLTNSSQSSSLFS---HGPGQPGSTSLGFGSGNSLGAA 562
PS +L S + G+S + SS ++ L S P +T+ +S
Sbjct: 581 DAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTASPAKVDSS---- 636
Query: 563 IGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPI 622
+ FG + GSSAS ++ S+SS S+ LA G F + SPSP+
Sbjct: 637 --GVIDLFGDAFGSSASEPQPASQAASSSS----ASADLLAGFGGSF-----MAPSPSPV 685
Query: 623 -----GMPLPSQTPGHSLTPPPSLSSHGSSSSLH-LGGL------TNGSGRYISAAPGAE 670
+ P+ TP S SS S LG L G +S P +
Sbjct: 686 TPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMAPAGQPAPVSMVPPSP 745
Query: 671 AKYRSASSTSSLFSSSSQL 689
A S + S L SS + L
Sbjct: 746 AMAASKALGSDLDSSLASL 764
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 55.1 bits (131), Expect = 4e-07
Identities = 87/344 (25%), Positives = 140/344 (40%), Gaps = 53/344 (15%)
Query: 360 QQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTL 419
Q ++ N+ S Q++ + Q G +G+GQ +PN GQ G S + +++N T
Sbjct: 175 QSSSYGEQNSDSHQSSGRGQCG------SGSGQ---SPNYGQHG----SGSGQSSSNDTH 221
Query: 420 AFGQGLATGMPGYQVLA-PTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQA 478
G G ++G ++ + ++ Y Q G+ G G +G G S +++
Sbjct: 222 GSGSGQSSGFSQHKSSSGQSSGYSQHGS---GSGHSSGYGQHGSR--------SGQSSRG 270
Query: 479 AAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSL 538
++ G++SS +G + +G +Q ++++ S G SS S S
Sbjct: 271 ERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSS 330
Query: 539 FSHGPGQ----PGSTSLGF-----GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLS 589
+S+ G G TS GF GSG S G + + SG SS G S+S S
Sbjct: 331 YSYSRGHYESGSGQTS-GFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQ 389
Query: 590 TSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLT-----PPPSLSSH 644
S R SSS +S G S G Q+PGH PS H
Sbjct: 390 HGSS--SRQSSSYGQHESASRHSSGRGQHSSGSG-----QSPGHGQRGSGSGQSPSSGQH 442
Query: 645 GSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQ 688
G+ G ++ SG Y+S + G + + S+S S +Q
Sbjct: 443 GTGF-----GRSSSSGPYVSGS-GYSSGFGHHESSSEHSSGYTQ 480
Score = 55.1 bits (131), Expect = 4e-07
Identities = 85/343 (24%), Positives = 136/343 (39%), Gaps = 30/343 (8%)
Query: 360 QQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTL 419
Q + + + ++S Q++ +Q G +G GQ Q +G++ S + ++++
Sbjct: 227 QSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQH 286
Query: 420 AFG--QGLATGMPGY-QVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAA 476
G Q L G G +P+ +G+ + G G+ S
Sbjct: 287 GSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSY--------SRGHY 338
Query: 477 QAAAAAAAG-GTASSLTGSTNGLFRP-IGTQPPQQQQQQPSTNLQSNSF--YGSSSLTNS 532
++ + +G G S +G ++G + G+ Q Q ST+ Q++S +GSSS +S
Sbjct: 339 ESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSS 398
Query: 533 S----QSSSLFSHGPGQ--------PGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASS 580
S +S+S S G GQ PG G GSG S + G +GFG S S
Sbjct: 399 SYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSS--GQHGTGFGRSSSSGPYV 456
Query: 581 SATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPS 640
S + S + SS G +S G S G + G S S
Sbjct: 457 SGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSS 516
Query: 641 LSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLF 683
HGS S LG +GSG S +P + ++ S S SS +
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSP-SRGRHESGSRQSSSY 558
Score = 52.8 bits (125), Expect = 2e-06
Identities = 61/204 (29%), Positives = 82/204 (40%), Gaps = 9/204 (4%)
Query: 487 TASSLTGSTNGLFRPIGTQPPQQQQ-----QQPSTNLQSNSFYGSSSLTNSSQSSSLFSH 541
+A S GS +G F G Q Q+ S+ QS+S+ S SSQSS H
Sbjct: 1295 SAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGS--GSSQSSGYGRH 1352
Query: 542 GPGQPGSTSLG-FGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSS 600
G G S S G GSG+ ++ G SG G S S S + + S + SS
Sbjct: 1353 GAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSS 1412
Query: 601 SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSG 660
G +S + S G + G S S HGS S LG +GSG
Sbjct: 1413 GCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSG 1472
Query: 661 RYISAAPGAEAKYRSASSTSSLFS 684
S +P + ++ S S SS +S
Sbjct: 1473 SGQSPSP-SRGRHGSGSGQSSSYS 1495
Score = 52.4 bits (124), Expect = 2e-06
Identities = 69/213 (32%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 483 AAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHG 542
+ G S GS +G F G Q S S+S G SS +S+S + G
Sbjct: 822 SGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSS--GQSSSYGQHESASHHASG 879
Query: 543 PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSV-------GSSASSSATRRESLSTSSDLY 595
G+ GS GSG S G G SG G S GS SSS+ R S S S +
Sbjct: 880 RGRHGS-----GSGQSPGH--GQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGF 932
Query: 596 KRSSSSLAPIGQPFYNS-LGFSSS----PSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSL 650
SSS G + S G SSS S G S+ G S S HGS S
Sbjct: 933 GHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQ 992
Query: 651 HLGGLTNGSGRYISAAPGAEAKYRSASSTSSLF 683
LG +GSG S +P + ++ S S SS +
Sbjct: 993 SLGHGQHGSGSGQSPSP-SRGRHGSGSGQSSSY 1024
Score = 52.4 bits (124), Expect = 2e-06
Identities = 67/189 (35%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 510 QQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGF-GSGNSLGAAIGSALS 568
Q Q ST+ QS++F S T QSSS HG G S+S G GSG+ + G S
Sbjct: 2250 QGQHGSTSGQSSTFDQEGSSTG--QSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGS 2307
Query: 569 GFGSSV-------GSSASSSATRRESLS-TSSDLYKRSSSSLAPIGQPFYNS-LGFSSS- 618
G G S GS SSS+ R S S SS SSS G + S G SSS
Sbjct: 2308 GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSY 2367
Query: 619 ---PSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRS 675
S G + G S S HGS S LG +GSG S +P + ++ S
Sbjct: 2368 EQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP-SRGRHGS 2426
Query: 676 ASSTSSLFS 684
S SS +S
Sbjct: 2427 GSGQSSSYS 2435
Score = 50.8 bits (120), Expect = 7e-06
Identities = 66/188 (35%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 510 QQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGF-GSGNSLGAAIGSALS 568
Q Q ST+ QS++F S T QSSS HG G S+S G GSG+ + G S
Sbjct: 1780 QGQHGSTSGQSSTFDQEGSSTG--QSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGS 1837
Query: 569 GFGSSV-------GSSASSSATRRESLS-TSSDLYKRSSSSLAPIGQPFYNS-LGFSSS- 618
G G S GS SSS+ R S S SS SSS G + S G SSS
Sbjct: 1838 GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSY 1897
Query: 619 ---PSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRS 675
S G + G S S HGS S LG +GSG S +P + ++ S
Sbjct: 1898 EQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP-SRGRHGS 1956
Query: 676 ASSTSSLF 683
S SS +
Sbjct: 1957 GSGQSSSY 1964
Score = 47.4 bits (111), Expect = 7e-05
Identities = 87/366 (23%), Positives = 131/366 (35%), Gaps = 64/366 (17%)
Query: 359 QQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPT 418
+Q ++A ++++ Q + Q +G+GQ P +P++G+ ES + +++
Sbjct: 506 RQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSP-SPSRGRH----ESGSRQSSSYGP 560
Query: 419 LAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQA 478
+G G ++ Y+ G G +GLG SS Q
Sbjct: 561 HGYGSGRSSSRGPYES---------------GSGHSSGLGHQESRSGQ-----SSGYGQH 600
Query: 479 AAAAAAGGTASSLTGSTNGLFRPIG----TQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQ 534
+++ T GST+G G T Q + +S YG + S Q
Sbjct: 601 GSSSGHSSTHGQ-HGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQG-SGSGQ 658
Query: 535 SSSLFSHGP--------GQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRE 586
S S HG GQ GS S G+ S N ++ SGFG GS SS ++
Sbjct: 659 SPSRGRHGSDFGHSSSYGQHGSGS-GWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHG 717
Query: 587 SLSTSSDLYKRS-------------------SSSLAPIGQPFYNSLGFSSSPSPIGMPLP 627
S S+ S Y++ SSS G + S G S G
Sbjct: 718 SGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPS 777
Query: 628 SQTPGHSLTPPPSLSSHGS--SSSLHLGGLTNGSGR---YISAAPGAEAKYRSASSTSSL 682
G S S HGS S S G +GSG+ + G+ Y S S
Sbjct: 778 RVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGH 837
Query: 683 FSSSSQ 688
FSS +
Sbjct: 838 FSSQGR 843
Score = 46.6 bits (109), Expect = 1e-04
Identities = 63/233 (27%), Positives = 81/233 (34%), Gaps = 9/233 (3%)
Query: 472 SSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSL-- 529
S ++ + + G +SS +G G + + Q S Q S G SS
Sbjct: 1488 SGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHG 1547
Query: 530 ---TNSSQSSSLFSHGPGQPGSTSLG-FGSGNSLGAAIGSALSGFGSSVGSSASSSATRR 585
+ S QSSS HG S+S G GSG+S + G SG G S G S +R+
Sbjct: 1548 QHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 1607
Query: 586 ESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHG 645
SSS G S GF S G G HG
Sbjct: 1608 SPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHG 1667
Query: 646 SSSSLHLGGLTNGSGRYISAAPGAEAK-YRSASSTSSLFSSSSQLFPPSRLRY 697
S S G +GS S+ G R +S S S Q PSR R+
Sbjct: 1668 SRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQ--SPSRGRH 1718
Score = 46.2 bits (108), Expect = 2e-04
Identities = 58/225 (25%), Positives = 80/225 (35%), Gaps = 12/225 (5%)
Query: 484 AGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGP 543
+ G S + + G +P ++ Q + Q NS+ G SS S S S G
Sbjct: 133 SAGENDSYSRNVRGSLKPGTESISRRLSFQRDFSGQHNSYSGQSSSYGEQNSDSHQSSGR 192
Query: 544 GQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLA 603
GQ GS S + G+ G + S GS SS ++ +S S S Y + S
Sbjct: 193 GQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSG 252
Query: 604 PIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYI 663
+S G+ S G + S S HGS S LG GSG
Sbjct: 253 -------HSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSG--- 302
Query: 664 SAAPGAEAKYRSASSTSSLFS--SSSQLFPPSRLRYNRSDIMPSG 706
S + ++ S S SS S + SR Y SG
Sbjct: 303 SRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSG 347
Score = 46.2 bits (108), Expect = 2e-04
Identities = 92/361 (25%), Positives = 140/361 (38%), Gaps = 37/361 (10%)
Query: 359 QQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQG-QQGQQAESLAAAAAANP 417
+Q ++ + +AS+ ++ + Q G GQR Q GQ ++++ P
Sbjct: 395 RQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGP 454
Query: 418 TLAFGQGLATGMPGYQVLAP-TAYYDQTGALVVGPGARTGLGAPVRLMAPTPV---LISS 473
++ G G ++G ++ + ++ Y Q G+ G G +G G + SS
Sbjct: 455 YVS-GSGYSSGFGHHESSSEHSSGYTQHGS---GSGHSSGHGQHGSRSGQSSRGERQGSS 510
Query: 474 AAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSF----YGS--S 527
A + ++ G+ SL S +G G P + + S + QS+S+ YGS S
Sbjct: 511 AGSSSSYGQHGSGSRQSLGHSRHG--SGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRS 568
Query: 528 SLTNSSQSSSLFSHGPGQPGSTS---LGFG-----SGNSLGAAIGSALSGFGSSVG---- 575
S +S S S G G S S G+G SG+S + SG SS G
Sbjct: 569 SSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGA 628
Query: 576 -SSASSSATRRESLSTSSDLYKRSSS------SLAPIGQPFYNSLGFSSSPSPIGMPLPS 628
S SSS + S S+ S Y + S S G F +S + S G S
Sbjct: 629 TSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWS-SS 687
Query: 629 QTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQ 688
P S++ S H S S G +GSG S+ SS S SSS
Sbjct: 688 NGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSG 747
Query: 689 L 689
L
Sbjct: 748 L 748
Score = 44.7 bits (104), Expect = 5e-04
Identities = 81/343 (23%), Positives = 127/343 (37%), Gaps = 33/343 (9%)
Query: 360 QQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTL 419
Q ++ + +AS A+ + + G G GQR Q + S + ++++
Sbjct: 863 QSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRH 922
Query: 420 AFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAA 479
G G ++G ++ Y Q G+ + G+ + + SS+ + ++
Sbjct: 923 GSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSS 982
Query: 480 AAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSF--YGSSSLTNSSQSSS 537
G+ SL +G G P + + S + QS+S+ Y S S +SS+
Sbjct: 983 YGQHGSGSRQSLGHGQHG--SGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSR--- 1037
Query: 538 LFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSD---- 593
GP + GS G SG + SG+G GSS+ S+T + STS
Sbjct: 1038 ----GPYESGS---GHSSGLGHRESRSGQSSGYGQH-GSSSGHSSTHGQHGSTSGQSSSC 1089
Query: 594 ----LYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGH-----SLTPPPSLSSH 644
SSS G S G+ S G Q+PGH PS H
Sbjct: 1090 GQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSG-----QSPGHGQRGSGSRQSPSYGRH 1144
Query: 645 GSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
GS S +GSG S+ G SS+ S S S
Sbjct: 1145 GSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGS 1187
Score = 43.9 bits (102), Expect = 8e-04
Identities = 85/350 (24%), Positives = 120/350 (34%), Gaps = 51/350 (14%)
Query: 367 NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLA 426
+ +AS +SQ + G + +GQ + Q Q ES + A+ G G +
Sbjct: 831 HGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQS 890
Query: 427 TGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG 486
G + Q G+ G G G + +++ G
Sbjct: 891 PG------------HGQRGS---GSGQSPSYG---------------RHGSGSGRSSSSG 920
Query: 487 TASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQP 546
S +G ++G + Q S + S+S+ S S QSS HG
Sbjct: 921 RHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGS--RSGQSSRSEQHGSSSG 978
Query: 547 GSTSLG-FGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLY--KRSSSSLA 603
S+S G GSG+ G GS G S S S R S S S Y RS S +
Sbjct: 979 SSSSYGQHGSGSRQSLGHGQ----HGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWS 1034
Query: 604 PIGQPFYNSLGFSS--------SPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGL 655
P+ + G SS S G + GHS T S+ G SSS G
Sbjct: 1035 SSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGA 1094
Query: 656 TNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPS 705
++G S++ G S SS S S P R + S PS
Sbjct: 1095 SSGQ----SSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPS 1140
Score = 43.5 bits (101), Expect = 0.001
Identities = 78/322 (24%), Positives = 110/322 (34%), Gaps = 43/322 (13%)
Query: 367 NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLA 426
+ + S+Q+ Q G +G+GQ P +P++G+ G G G +
Sbjct: 986 HGSGSRQSLGHGQHG------SGSGQSP-SPSRGRHGS-----------------GSGQS 1021
Query: 427 TGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG 486
+ Y+ + + + G G G +GLG SS Q +++
Sbjct: 1022 SSYGPYR--SGSGWSSSRGPYESGSGHSSGLGHRESRSGQ-----SSGYGQHGSSSGHSS 1074
Query: 487 TASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQP 546
T GST+G G Q S S+ +GS S SQSS G G
Sbjct: 1075 THGQ-HGSTSGQSSSCG------QHGASSGQSSSHGQHGSGS----SQSSGYGRQGSGSG 1123
Query: 547 GSTSLGF-GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI 605
S G GSG+ + G SG G S S S S + SSS +
Sbjct: 1124 QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQH 1183
Query: 606 GQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISA 665
G +S G+ S G + G S HGS S G GSG S
Sbjct: 1184 GSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSP 1243
Query: 666 APGAEAKYRSASSTSSLFSSSS 687
+ G SS+ S S
Sbjct: 1244 SRGRHGSGLGHSSSHGQHGSGS 1265
Score = 42.7 bits (99), Expect = 0.002
Identities = 78/322 (24%), Positives = 109/322 (33%), Gaps = 43/322 (13%)
Query: 367 NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLA 426
+ + S+Q+ Q G +G+GQ P +P++G+ G G G +
Sbjct: 2396 HGSGSRQSLGHGQHG------SGSGQSP-SPSRGRHGS-----------------GSGQS 2431
Query: 427 TGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG 486
+ Y + + + G G G +GLG SS Q +++
Sbjct: 2432 SSYSPYG--SGSGWSSSRGPYESGSGHSSGLGHRESRSGQ-----SSGYGQHGSSSGHSS 2484
Query: 487 TASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQP 546
T GST+G G Q S S+ +GS S SQSS G G
Sbjct: 2485 THGQ-HGSTSGQSSSCG------QHGASSGQSSSHGQHGSGS----SQSSGYGRQGSGSG 2533
Query: 547 GSTSLGF-GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI 605
S G GSG+ + G SG G S S S S + SSS +
Sbjct: 2534 QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQH 2593
Query: 606 GQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISA 665
G +S G+ S G + G S HGS S G GSG S
Sbjct: 2594 GSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSP 2653
Query: 666 APGAEAKYRSASSTSSLFSSSS 687
+ G SS+ S S
Sbjct: 2654 SRGRHGSGLGHSSSHGQHGSGS 2675
Score = 41.2 bits (95), Expect = 0.005
Identities = 57/194 (29%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 515 STNLQSNSFYGSSSL-----TNSSQSSSLFSHGPGQPGSTSLGFG-SGNSLGAAIGSALS 568
ST+ Q S G SS +S QSSS HG G S S G+G G+ G + G
Sbjct: 1544 STHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGS--SQSSGYGRQGSGSGQSPGHGQR 1601
Query: 569 GFGS----SVGSSASSSATRRESLSTSSDLYKRS-----------SSSLAPIGQPFYNSL 613
G GS S G S S S S L + S SSS + G +S
Sbjct: 1602 GSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSS 1661
Query: 614 GFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKY 673
G+ S G + G S HGS S G GSG S + G
Sbjct: 1662 GYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSG 1721
Query: 674 RSASSTSSLFSSSS 687
SS+ S S
Sbjct: 1722 LGHSSSHGQHGSGS 1735
Score = 40.8 bits (94), Expect = 0.007
Identities = 77/322 (23%), Positives = 109/322 (33%), Gaps = 43/322 (13%)
Query: 367 NNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLA 426
+ + S+Q+ Q G +G+GQ P +P++G+ G + GQ +
Sbjct: 1926 HGSGSRQSLGHGQHG------SGSGQSP-SPSRGRHGSGS---------------GQSSS 1963
Query: 427 TGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG 486
G G + + + G G G +GLG S + Q++ G
Sbjct: 1964 YGPYG----SGSGWSSSRGPYESGSGHSSGLGHR-----------ESRSGQSSGYGQHG- 2007
Query: 487 TASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQP 546
+SS ST+G Q Q S+ S+ S SSQSS G G
Sbjct: 2008 -SSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGSG---SSQSSGYGRQGSGSG 2063
Query: 547 GSTSLGF-GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI 605
S G GSG+ + G SG G S S S + SSS +
Sbjct: 2064 QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQH 2123
Query: 606 GQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISA 665
G +S G+ S G + G S HGS S G GSG S
Sbjct: 2124 GSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSP 2183
Query: 666 APGAEAKYRSASSTSSLFSSSS 687
+ G SS+ S S
Sbjct: 2184 SRGRHGSGSGHSSSHGQHGSGS 2205
Score = 40.0 bits (92), Expect = 0.012
Identities = 64/243 (26%), Positives = 86/243 (35%), Gaps = 31/243 (12%)
Query: 472 SSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSF--YGSSSL 529
SS+ + ++ G+ SL +G G P + + S + QS+S+ YGS S
Sbjct: 1915 SSSGSSSSYGQHGSGSRQSLGHGQHG--SGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSG 1972
Query: 530 TNSS-----------------QSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGS 572
+SS +S S S G GQ GS+S + G+A G + S
Sbjct: 1973 WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQH 2032
Query: 573 SVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSP--------IGM 624
S SSS + S S+ S Y R S P + G S SP G
Sbjct: 2033 GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQ--SPGHGQRGSGSRQSPSYGRHGSGSGR 2090
Query: 625 PLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFS 684
S G L H SSS +GSG S+ G SS
Sbjct: 2091 SSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHG 2150
Query: 685 SSS 687
SSS
Sbjct: 2151 SSS 2153
Score = 39.3 bits (90), Expect = 0.020
Identities = 63/244 (25%), Positives = 86/244 (35%), Gaps = 31/244 (12%)
Query: 472 SSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSF--YGSSSL 529
SS+ + ++ G+ SL +G G P + + S + QS+S+ YGS S
Sbjct: 1445 SSSGSSSSYGQHGSGSRQSLGHGQHG--SGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSG 1502
Query: 530 TNSS-----------------QSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGS 572
+SS +S S S G GQ GS+S + G+ G + S
Sbjct: 1503 WSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQH 1562
Query: 573 SVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSP--------IGM 624
S SSS + S S+ S Y R S P + G S SP G
Sbjct: 1563 GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQ--SPGHGQRGSGSRQSPSYGRHGSGSGR 1620
Query: 625 PLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFS 684
S G L H SSS +GSG S+ G SS
Sbjct: 1621 SSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHG 1680
Query: 685 SSSQ 688
SSS+
Sbjct: 1681 SSSR 1684
Score = 35.8 bits (81), Expect = 0.22
Identities = 68/236 (28%), Positives = 84/236 (35%), Gaps = 28/236 (11%)
Query: 486 GTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQ 545
G +SS +G R P + + S Q S G SS + S S GQ
Sbjct: 1253 GHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQ 1312
Query: 546 PGSTSLGFGSGNSLGAAIGSALS----GFGSS---------VGSSASSSATRRESLSTSS 592
GSTS + + G++ G + S G GSS GS S S R S S S
Sbjct: 1313 HGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHS 1372
Query: 593 DLYKRS------SSSLAPIGQPFYNSLGF----SSSPSPIGMPLPSQTPGHSLTPPPSLS 642
Y + SSS G S GF SSS G GHS S
Sbjct: 1373 SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHS----SSYE 1428
Query: 643 SHGSSSSLHLGGLTNGSGRYISAAPGAEAK-YRSASSTSSLFSSSSQLFPPSRLRY 697
HGS S G +GS S++ G R + S S Q PSR R+
Sbjct: 1429 QHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRH 1484
Score = 34.7 bits (78), Expect = 0.49
Identities = 48/184 (26%), Positives = 65/184 (35%), Gaps = 16/184 (8%)
Query: 505 QPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIG 564
Q Q++ ++ Q +SF SS + S S G +PG+ S+ S +
Sbjct: 109 QEEQEETEKEENKRQESSFSHSSWSAGENDSYSRNVRGSLKPGTESI------SRRLSFQ 162
Query: 565 SALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQ-PFYNSLGFSSSPSPIG 623
SG +S +SS + SS + S S GQ P Y G S G
Sbjct: 163 RDFSGQHNSYSGQSSSYGEQNSDSHQSSGRGQCGSGS----GQSPNYGQHGSGS-----G 213
Query: 624 MPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLF 683
+ T G S H SSS G +GSG S+ G SS
Sbjct: 214 QSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERH 273
Query: 684 SSSS 687
SSS
Sbjct: 274 RSSS 277
Score = 34.7 bits (78), Expect = 0.49
Identities = 56/205 (27%), Positives = 73/205 (35%), Gaps = 7/205 (3%)
Query: 483 AAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHG 542
+ G +SS +G R P + + S Q S G SS + S S
Sbjct: 2190 SGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCS 2249
Query: 543 PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSL 602
GQ GSTS + + G++ G + S GSS SSS ++ S S S R S
Sbjct: 2250 QGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGS-- 2307
Query: 603 APIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRY 662
G +S G S S G S G H SSS G +GSG
Sbjct: 2308 ---GSGHSSSYGQHGSGS--GWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSG 2362
Query: 663 ISAAPGAEAKYRSASSTSSLFSSSS 687
S++ SS SSS
Sbjct: 2363 HSSSYEQHGSRSGQSSRGERHGSSS 2387
Score = 34.7 bits (78), Expect = 0.49
Identities = 75/323 (23%), Positives = 115/323 (35%), Gaps = 48/323 (14%)
Query: 360 QQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTL 419
Q ++ + + S Q++ + G G GQR Q + S + ++++
Sbjct: 2508 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQH 2567
Query: 420 AFGQGLATGMPGYQVLA-PTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQA 478
G G ++G ++ + ++ Y Q G+ G G +G G S + Q+
Sbjct: 2568 GSGLGESSGFGHHESSSGQSSSYSQHGS---GSGHSSGYGQH-----------GSRSGQS 2613
Query: 479 AAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSL 538
+ G ++ S S++ G++ +Q S + QS S S SSS
Sbjct: 2614 SRGERHGSSSGS---SSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGS--GLGHSSSH 2668
Query: 539 FSHGPGQPGSTSLG-----------FGSGNSLGAAIGSALSGFGSSVG----------SS 577
HG G S+S G FG S G+ SA S GS G +S
Sbjct: 2669 GQHGSGSGRSSSRGPYESRLGHSSVFGQHES-GSGHSSAYSQHGSGSGHFCSQGQHGSTS 2727
Query: 578 ASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTP 637
SS +E ST SSS G S G+ + G L G
Sbjct: 2728 GQSSTFDQEGSSTGQ------SSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQ 2781
Query: 638 PPSLSSHGSSSSLHLGGLTNGSG 660
S HGS S G +GSG
Sbjct: 2782 SSSYGQHGSGSGQSSGYSQHGSG 2804
Score = 34.3 bits (77), Expect = 0.64
Identities = 56/202 (27%), Positives = 72/202 (35%), Gaps = 7/202 (3%)
Query: 486 GTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQ 545
G +SS +G R P + + S Q S G SS + S S GQ
Sbjct: 1723 GHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQ 1782
Query: 546 PGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI 605
GSTS + + G++ G + S GSS SSS ++ S S S R S
Sbjct: 1783 HGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGS----- 1837
Query: 606 GQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISA 665
G +S G S S G S G H SSS G +GSG S+
Sbjct: 1838 GSGHSSSYGQHGSGS--GWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSS 1895
Query: 666 APGAEAKYRSASSTSSLFSSSS 687
+ SS SSS
Sbjct: 1896 SYEQHGSRSGQSSRGEQHGSSS 1917
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 53.1 bits (126), Expect = 1e-06
Identities = 129/512 (25%), Positives = 175/512 (34%), Gaps = 104/512 (20%)
Query: 282 QQYALAAAQQPHIAGVFSAGLAPAAFVPN--PYIISAAPPGT------DPYTAAGLAAAA 333
+Q + PH A + S G P P P I+ PGT + T G AA
Sbjct: 100 EQAFKGGCKAPH-AMISSCGTIPGNPYPKGRPSRINGIFPGTPLKKDGEECTNEGKGIAA 158
Query: 334 TLAGPAVVPPQYYG----VPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAG 389
+ GP+ PP Y VP+ + P A +A NN A+ P
Sbjct: 159 RILGPSKPPPSTYNPHKPVPYPIPPCRPHATIAPSAYNNAGLVPLANVIAPPPPPYTPNP 218
Query: 390 AG------QRPLTPNQGQQ-GQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYD 442
G P P Q Q A L + +NP+ + T P + P+A
Sbjct: 219 VGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVKAINHPSASAA 278
Query: 443 QT--------GALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS 494
T L V PG + + P P +I + + A + T ++ S
Sbjct: 279 ATVSGMNLLNTVLPVFPGQVSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPS 338
Query: 495 T-NGLF---------------------RPIGTQPPQQQQQQPSTNL--QSNSFYGSSSLT 530
+GL +G+ P T+L ++S S+S
Sbjct: 339 IFSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNP 398
Query: 531 NSSQSSSLFSHGPGQPGSTSLGF---------GSGNSLGAAIG------SALSGFGSS-- 573
NS+ SS+F+ P TS G GS S+ +G SAL GF +S
Sbjct: 399 NSASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSND 458
Query: 574 ---VGSSASSSATRRESLSTSSDLYKRSSSS-------LAPIGQPFYNSLG------FSS 617
+ SSA SSA S SS + S SS AP P F
Sbjct: 459 TNLINSSALSSAVTSGLASLSSLTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPG 518
Query: 618 SPSPIG------MPLPSQTPGHSLTPPPSLS-----SHGSSSSLHLGGLTNGSGRYISAA 666
PSP+ + LP Q+P L S S S GSS+SL G S +IS+
Sbjct: 519 LPSPVANSTSTPLTLPVQSP---LATAASASTSVPVSCGSSASLLRGPHPGTSDLHISST 575
Query: 667 PGAEA-----KYRSASSTSSLFSSSSQLFPPS 693
P A K S T S F S PS
Sbjct: 576 PAATTLPVMIKTEPTSPTPSAFKGPSHSGNPS 607
Score = 45.4 bits (106), Expect = 3e-04
Identities = 112/454 (24%), Positives = 161/454 (35%), Gaps = 95/454 (20%)
Query: 297 VFSAGLAPAAFVPNPYIISAAPPGTDPYTAAG----------LAAAATLAGPAVVPPQYY 346
V SA P +PNP +I T P T+ + +L GP+ P
Sbjct: 298 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 357
Query: 347 GVPWGVYPANLFQQQAAAAANN-------TASQQAASQAQPGQQQVLRAGAG-QRPLTP- 397
P + L +A A+ + + S AAS + P + AG PL P
Sbjct: 358 PTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNSASLSSVFAGLPLPLPPT 417
Query: 398 NQGQQ-------GQQAESLAAAAAANPTL-------------------AFGQGLATGMPG 431
+QG G S+A N L A + +G+
Sbjct: 418 SQGLSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTSGLAS 477
Query: 432 YQVL----------------APTAYYDQTGALVVGPGARTGLGAPVRLMAPTPV------ 469
L AP+A G GL +PV TP+
Sbjct: 478 LSSLTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQS 537
Query: 470 -LISSAAAQAAAAAAAGGTASSLTGSTNGL------FRPIGTQPPQQQQQQPSTNLQSNS 522
L ++A+A + + G +AS L G G P T P + +P T+ ++
Sbjct: 538 PLATAASASTSVPVSCGSSASLLRGPHPGTSDLHISSTPAATTLPVMIKTEP-TSPTPSA 596
Query: 523 FYGSSSLTNSSQSSSLFSHGPGQP-GSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSS 581
F G S N S + S G+ STS+ SL A + ALSG SS S+
Sbjct: 597 FKGPSHSGNPSHGTLGLSGTLGRAYTSTSVPI----SLSACLNPALSGL-----SSLSTP 647
Query: 582 ATRRESLSTSSDLYKRSSSSLAPI--GQPFYNSL--GFSSSPSPIGMP---LPSQTPGHS 634
LS+ S SS+ +AP+ P + SL F + +P P LP S
Sbjct: 648 LNGSNPLSSISLPPHGSSTPIAPVFTALPSFTSLTNNFPLTGNPSLNPSVSLPGSLIATS 707
Query: 635 LTPPPSLS-SHGSSSSLHLGGLTNGSGRYISAAP 667
T S S H SS++ L GL+ + +SAAP
Sbjct: 708 STAATSTSLPHPSSTAAVLSGLS--ASAPVSAAP 739
Score = 30.4 bits (67), Expect = 9.3
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 543 PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASS-----SATRRESLSTSSDLYKR 597
PG + S F S A + S L GSSV S + S S+ +L
Sbjct: 813 PGFASAFSSNFNSALVAQAGLSSGLQAAGSSVFPGLLSLPGIPGFPQNPSQSSLQELQHN 872
Query: 598 SSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHG 645
+++ A + Q S S P G P PG + PSLS G
Sbjct: 873 AAAQSALLQQVHSASALESYPAQPDGFPSYPSAPGTPFSLQPSLSQSG 920
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 53.1 bits (126), Expect = 1e-06
Identities = 129/512 (25%), Positives = 175/512 (34%), Gaps = 104/512 (20%)
Query: 282 QQYALAAAQQPHIAGVFSAGLAPAAFVPN--PYIISAAPPGT------DPYTAAGLAAAA 333
+Q + PH A + S G P P P I+ PGT + T G AA
Sbjct: 122 EQAFKGGCKAPH-AMISSCGTIPGNPYPKGRPSRINGIFPGTPLKKDGEECTNEGKGIAA 180
Query: 334 TLAGPAVVPPQYYG----VPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAG 389
+ GP+ PP Y VP+ + P A +A NN A+ P
Sbjct: 181 RILGPSKPPPSTYNPHKPVPYPIPPCRPHATIAPSAYNNAGLVPLANVIAPPPPPYTPNP 240
Query: 390 AG------QRPLTPNQGQQ-GQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYD 442
G P P Q Q A L + +NP+ + T P + P+A
Sbjct: 241 VGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVKAINHPSASAA 300
Query: 443 QT--------GALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS 494
T L V PG + + P P +I + + A + T ++ S
Sbjct: 301 ATVSGMNLLNTVLPVFPGQVSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPS 360
Query: 495 T-NGLF---------------------RPIGTQPPQQQQQQPSTNL--QSNSFYGSSSLT 530
+GL +G+ P T+L ++S S+S
Sbjct: 361 IFSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNP 420
Query: 531 NSSQSSSLFSHGPGQPGSTSLGF---------GSGNSLGAAIG------SALSGFGSS-- 573
NS+ SS+F+ P TS G GS S+ +G SAL GF +S
Sbjct: 421 NSASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSND 480
Query: 574 ---VGSSASSSATRRESLSTSSDLYKRSSSS-------LAPIGQPFYNSLG------FSS 617
+ SSA SSA S SS + S SS AP P F
Sbjct: 481 TNLINSSALSSAVTSGLASLSSLTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPG 540
Query: 618 SPSPIG------MPLPSQTPGHSLTPPPSLS-----SHGSSSSLHLGGLTNGSGRYISAA 666
PSP+ + LP Q+P L S S S GSS+SL G S +IS+
Sbjct: 541 LPSPVANSTSTPLTLPVQSP---LATAASASTSVPVSCGSSASLLRGPHPGTSDLHISST 597
Query: 667 PGAEA-----KYRSASSTSSLFSSSSQLFPPS 693
P A K S T S F S PS
Sbjct: 598 PAATTLPVMIKTEPTSPTPSAFKGPSHSGNPS 629
Score = 45.4 bits (106), Expect = 3e-04
Identities = 112/454 (24%), Positives = 161/454 (35%), Gaps = 95/454 (20%)
Query: 297 VFSAGLAPAAFVPNPYIISAAPPGTDPYTAAG----------LAAAATLAGPAVVPPQYY 346
V SA P +PNP +I T P T+ + +L GP+ P
Sbjct: 320 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 379
Query: 347 GVPWGVYPANLFQQQAAAAANN-------TASQQAASQAQPGQQQVLRAGAG-QRPLTP- 397
P + L +A A+ + + S AAS + P + AG PL P
Sbjct: 380 PTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNSASLSSVFAGLPLPLPPT 439
Query: 398 NQGQQ-------GQQAESLAAAAAANPTL-------------------AFGQGLATGMPG 431
+QG G S+A N L A + +G+
Sbjct: 440 SQGLSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTSGLAS 499
Query: 432 YQVL----------------APTAYYDQTGALVVGPGARTGLGAPVRLMAPTPV------ 469
L AP+A G GL +PV TP+
Sbjct: 500 LSSLTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQS 559
Query: 470 -LISSAAAQAAAAAAAGGTASSLTGSTNGL------FRPIGTQPPQQQQQQPSTNLQSNS 522
L ++A+A + + G +AS L G G P T P + +P T+ ++
Sbjct: 560 PLATAASASTSVPVSCGSSASLLRGPHPGTSDLHISSTPAATTLPVMIKTEP-TSPTPSA 618
Query: 523 FYGSSSLTNSSQSSSLFSHGPGQP-GSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSS 581
F G S N S + S G+ STS+ SL A + ALSG SS S+
Sbjct: 619 FKGPSHSGNPSHGTLGLSGTLGRAYTSTSVPI----SLSACLNPALSGL-----SSLSTP 669
Query: 582 ATRRESLSTSSDLYKRSSSSLAPI--GQPFYNSL--GFSSSPSPIGMP---LPSQTPGHS 634
LS+ S SS+ +AP+ P + SL F + +P P LP S
Sbjct: 670 LNGSNPLSSISLPPHGSSTPIAPVFTALPSFTSLTNNFPLTGNPSLNPSVSLPGSLIATS 729
Query: 635 LTPPPSLS-SHGSSSSLHLGGLTNGSGRYISAAP 667
T S S H SS++ L GL+ + +SAAP
Sbjct: 730 STAATSTSLPHPSSTAAVLSGLS--ASAPVSAAP 761
Score = 30.4 bits (67), Expect = 9.3
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 543 PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASS-----SATRRESLSTSSDLYKR 597
PG + S F S A + S L GSSV S + S S+ +L
Sbjct: 835 PGFASAFSSNFNSALVAQAGLSSGLQAAGSSVFPGLLSLPGIPGFPQNPSQSSLQELQHN 894
Query: 598 SSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHG 645
+++ A + Q S S P G P PG + PSLS G
Sbjct: 895 AAAQSALLQQVHSASALESYPAQPDGFPSYPSAPGTPFSLQPSLSQSG 942
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 52.8 bits (125), Expect = 2e-06
Identities = 101/420 (24%), Positives = 151/420 (35%), Gaps = 75/420 (17%)
Query: 278 AAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAG 337
A+ AL+A P GV A P S + PG TAA +++A +A
Sbjct: 1555 ASSTSLVALSAEATPATTGVPDARTEAV-----PPASSFSVPGQTAVTAAAISSAGPVAV 1609
Query: 338 PAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTP 397
P V P A AAA T + ++ AQP P
Sbjct: 1610 ETSSTPIASSTTSIVAPG----PSAEAAAFGTVTSGSSVFAQP-------------PAAS 1652
Query: 398 NQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGAR--- 454
+ Q + A A +A P FGQ A+ AP+ + QTG+ A
Sbjct: 1653 SSSAFNQLTNNTATAPSATPV--FGQVAAS-------TAPSLFGQQTGSTASTAAATPQV 1703
Query: 455 --TGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQ 512
+G +P V + QA+ + +A+S+ + F + P Q
Sbjct: 1704 SSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSV---PAFGQPA 1760
Query: 513 QPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGS--------------TSLGFGSGNS 558
+ S S +G++S S+ SSS FS G P + S GFG G S
Sbjct: 1761 SSTPTSTSGSVFGAAS---STSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGS 1817
Query: 559 L-----GAAIGSALSGF----GSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI---- 605
+ A +A SGF S GSS + S + + + ++SSSS +
Sbjct: 1818 VFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSG 1877
Query: 606 ----GQPFYNSLGFSSSPSPIGM-PLPSQTPGHSLTPPPSLSS-HGSSSSLHLGGLTNGS 659
G F++ LG S P S + G T + S+ G+S + GG + S
Sbjct: 1878 NTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSS 1937
Score = 48.9 bits (115), Expect = 3e-05
Identities = 120/589 (20%), Positives = 201/589 (34%), Gaps = 62/589 (10%)
Query: 122 ETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDF----NRTPG 177
ET G G + G+A + N+ G+P+G + P
Sbjct: 1329 ETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPV 1388
Query: 178 SRQASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQF 237
+ A+ T V +T+ + G LP +A V F G +
Sbjct: 1389 TSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNS 1448
Query: 238 DYPGNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGV 297
P + P ++ AT + + ++A T +A + ++ P G
Sbjct: 1449 TVPPS-APPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGD 1507
Query: 298 FSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANL 357
+ A+ + SA P P T+ + LA PAV
Sbjct: 1508 SEVSASAASLLEEQQ--SAQLPQAPPQTSDSVKKEPVLAQPAV----------------- 1548
Query: 358 FQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANP 417
+ AA++T+ +++A P V A P + GQ A + AA ++A P
Sbjct: 1549 --SNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGP 1606
Query: 418 TLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQ 477
++AP + V G+ P + +++ A
Sbjct: 1607 VAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTAT 1666
Query: 478 AAAAA-----AAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPST--------NLQSNSFY 524
A +A A TA SL G G PQ S+ + + +
Sbjct: 1667 APSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTF 1726
Query: 525 GSSSLTNSSQSSSLFSHGPGQPGSTSL-GFGS-GNSLGAAIGSALSGFGSSVGSSASSSA 582
G +S+ S SS+ QPG +S+ FG +S + ++ G SS SS+SS +
Sbjct: 1727 GQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASST-SSSSSFS 1785
Query: 583 TRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIG----MPLPSQTPGHSLTPP 638
+ S +T L+ +S++ F S GF S G + T G S
Sbjct: 1786 FGQSSPNTGGGLFGQSNA------PAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFC-- 1837
Query: 639 PSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
S GSS++ + G +G G +S+SS+ S+F S +
Sbjct: 1838 -QASGFGSSNTGSVFGQAASTG-------GIVFGQQSSSSSGSVFGSGN 1878
Score = 43.5 bits (101), Expect = 0.001
Identities = 87/389 (22%), Positives = 146/389 (37%), Gaps = 59/389 (15%)
Query: 325 TAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQ 384
TA+ AA ++ P + GV+ F Q + + +++ S +QPG
Sbjct: 1693 TASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSS 1752
Query: 385 VLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQ------GLATGMPGYQVLAPT 438
V G +P + A++ +++ + +FGQ G G +
Sbjct: 1753 VPAFG---QPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQS 1809
Query: 439 AYYDQTGALVVGPGARTGLGAPVRLM---------APTPVLISSAAA-------QAAAAA 482
+ Q G++ G A T A + T + AA+ Q ++++
Sbjct: 1810 PGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFGQQSSSS 1869
Query: 483 AAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHG 542
+ S TG G F +G +P Q + + S F GS T +S +S+LF
Sbjct: 1870 SGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGF-GS---TATSNTSNLF--- 1922
Query: 543 PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSL 602
G G+ + G + +S G +G SS G S +S S + K
Sbjct: 1923 -GNSGAKTFGGFASSSFGE---QKPTGTFSSGGGSVASQGFGFSSPN------KTGGFGA 1972
Query: 603 APIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRY 662
AP+ F + F SP G+P P + S GS+ GG G G
Sbjct: 1973 APV---FGSPPTFGGSPGFGGVPAFGSAPAFT-------SPLGST-----GGKVFGEGTA 2017
Query: 663 ISAAPGAEAKYRSASSTSSLFSSSSQLFP 691
++A G + S+S+T+S + +SQ P
Sbjct: 2018 AASAGG--FGFGSSSNTTSFGTLASQNAP 2044
Score = 35.8 bits (81), Expect = 0.22
Identities = 79/326 (24%), Positives = 120/326 (36%), Gaps = 54/326 (16%)
Query: 395 LTPNQGQQGQQAESLAAAAAANPTLAFGQ----GLATGMPGYQVL---APTAYYDQTGAL 447
LTP Q +Q + + + PT A GQ A+G + P+A +
Sbjct: 1155 LTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPF 1214
Query: 448 VVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPP 507
P +G G ++ PTP + AA G T S+ S F G P
Sbjct: 1215 SFSP---SGTGFNFGIITPTP--------SSNFTAAQGATPSTKESSQPDAFSSGGGSKP 1263
Query: 508 QQQ---QQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSG------NS 558
+ + P + + S +S+ T ++S S P P T+L S +
Sbjct: 1264 SYEAIPESSPPSGITS-----ASNTTPGEPAAS--SSRPVAPSGTALSTTSSKLETPPSK 1316
Query: 559 LGAAI------GSALSGF-GSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYN 611
LG + G L F G VG + S+ ++ STS + + +S P G F
Sbjct: 1317 LGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTA 1376
Query: 612 S--LGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGA 669
LG + P P+ S S+ PP + S+ ++ L + GS IS
Sbjct: 1377 PPVLGKHTEP-----PVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFG--- 1428
Query: 670 EAKYRSASSTSSLFSS--SSQLFPPS 693
SA TS F S ++ PPS
Sbjct: 1429 -GTSLSAGKTSFSFGSQQTNSTVPPS 1453
Score = 34.7 bits (78), Expect = 0.49
Identities = 70/265 (26%), Positives = 101/265 (38%), Gaps = 46/265 (17%)
Query: 391 GQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG 450
G P TP Q Q+ ++ AAAA A+ +P AP A + L G
Sbjct: 432 GSTPTTPTSSQAPQKLDASAAAAPAS------------LPPSSPAAPIATF---SLLPAG 476
Query: 451 PGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQ 510
GAP + L SSA + + G+ SS G PP +
Sbjct: 477 -------GAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGP-STFSFVPPSKA 528
Query: 511 QQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGF 570
P+ +S + S+ S S S G +P S S ++ A+ +
Sbjct: 529 SLAPTP--------AASPVAPSAASFSFGSSG-FKPTLESTPVPSVSAPNIAMKPSFPPS 579
Query: 571 GSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYN-----SLGFSSSPSPIGMP 625
S+V + S T + +TS+ + SSS AP PF + + G S P+P+ P
Sbjct: 580 TSAVKVNLSEKFT---AAATSTPV---SSSQSAPPMSPFSSASKPAASGPLSHPTPLSAP 633
Query: 626 LPSQTPGHS--LTPPPSLSSHGSSS 648
PS P S L P S+ GSSS
Sbjct: 634 -PSSVPLKSSVLPSPSGRSAQGSSS 657
Score = 31.6 bits (70), Expect = 4.2
Identities = 56/243 (23%), Positives = 84/243 (34%), Gaps = 37/243 (15%)
Query: 361 QAAAAANNTASQQAASQA-------QPGQQQVLRAGAGQRPL--TPNQGQQGQQAESLAA 411
QAA+ QQ++S + G+ +G G +P N+ + +
Sbjct: 1853 QAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGS 1912
Query: 412 AAAANPTLAFGQGLATGMPGYQVLA-----PTAYYDQTGALVVGPGA------RTGLGAP 460
A +N + FG A G+ + PT + G V G +TG
Sbjct: 1913 TATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGA 1972
Query: 461 VRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQS 520
+ P S A + +S GST G GT S
Sbjct: 1973 APVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAA------------S 2020
Query: 521 NSFYGSSSLTNSSQSSSLFSHGPGQPGSTSL---GFGSGNSLGAAIGSALSGFGSSVGSS 577
+G S +N++ +L S GS S GFG+ +S + GS GF S GS+
Sbjct: 2021 AGGFGFGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGF--SFGSN 2078
Query: 578 ASS 580
SS
Sbjct: 2079 NSS 2081
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 51.2 bits (121), Expect = 5e-06
Identities = 82/333 (24%), Positives = 130/333 (39%), Gaps = 50/333 (15%)
Query: 394 PLTPNQGQ-QGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPG 452
PLT + Q + SL AA A P+ + G G T + A A Y ++
Sbjct: 229 PLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRT----QPMTAQAASYRAQPSV----- 279
Query: 453 ARTGLGAPVRLMAPTPVLISSAA--------AQAAAAAAAGGTASSLTGSTNGLFRPIGT 504
LGAP R +P S+AA AQ +A+A + + S+ + G+
Sbjct: 280 ---SLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGS 336
Query: 505 QPPQQQQQQPSTNLQSNSFYG----SSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLG 560
Q S Q+ S YG +SS +SSL G G+ + +G+ +
Sbjct: 337 SLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSL-----GSYGAQAASYGAQS--- 388
Query: 561 AAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPS 620
AA A +S + S+S + + + SS A + QP + ++S P+
Sbjct: 389 AASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP-ATAAAYASQPA 447
Query: 621 PIGMPLPSQTPGHSLTPP---PSLSSHGSSSSLHLGG------LTNGSGRY-ISAAPGAE 670
+ G P L+S+G+ +S+ L G +G Y +AA GA+
Sbjct: 448 AYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQ 507
Query: 671 ------AKYRSASSTSSLFSSSSQLFPPSRLRY 697
A YR+ SS S S ++Q P + Y
Sbjct: 508 PSATLAAPYRTQSSASLAASYAAQQHPQAAASY 540
Score = 38.1 bits (87), Expect = 0.044
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 26/234 (11%)
Query: 459 APVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQ----QQQP 514
+P R P+ A +A + + G + ++ G+ TQP Q + QP
Sbjct: 220 SPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGV--GYRTQPMTAQAASYRAQP 277
Query: 515 STNLQSNSFYGSSSLTNSSQS---SSLFSHGPGQPGSTSLGFGSGNSLGA-------AIG 564
S +L + Y + SSQS SSL +G QP +++L G + A A G
Sbjct: 278 SVSLGAP--YRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQG 335
Query: 565 SALSGFG---SSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSP 621
S+L+ +G SS G+ A+SS R + S+ + + ++SSL G + + + +
Sbjct: 336 SSLASYGNQPSSYGAQAASSYGVRAAASSYNT--QGAASSLGSYGA---QAASYGAQSAA 390
Query: 622 IGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRS 675
+ +Q ++ P S ++ + + + A P A Y S
Sbjct: 391 SSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYAS 444
Score = 30.4 bits (67), Expect = 9.3
Identities = 45/178 (25%), Positives = 67/178 (37%), Gaps = 26/178 (14%)
Query: 217 SNPETQNLDAMEQVGLESLQFDYPGNQVPMDSSGATVGLFDYNSQQQLFQRTNALTV--- 273
+ P + A G+ + Y ++ GA L Y +Q + +A +
Sbjct: 343 NQPSSYGAQAASSYGVRAAASSY-------NTQGAASSLGSYGAQAASYGAQSAASSLAY 395
Query: 274 --------QQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYT 325
Q +A+ Q A AAQQ A +S+ PAA+V P +A Y
Sbjct: 396 GAQAASYNAQPSASYNAQSAPYAAQQ---AASYSS--QPAAYVAQPATAAAYASQPAAYA 450
Query: 326 A-AGLAAAATLAGPAVVPPQY--YGVPWGVYPANLFQQQAAAAANNTASQQAASQAQP 380
A A A + VV Q YG + + + Q+AAAA + AA AQP
Sbjct: 451 AQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQP 508
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 51.2 bits (121), Expect = 5e-06
Identities = 86/408 (21%), Positives = 149/408 (36%), Gaps = 45/408 (11%)
Query: 182 SPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG 241
SP+ V +G N + S + P P + P S E+ + A+
Sbjct: 665 SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL-------------- 710
Query: 242 NQVPMDSSGATVGLFDYNSQQQLF--QRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFS 299
+Q PM + N Q + Q+T + Q +++ QQ + +G +
Sbjct: 711 SQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYG 770
Query: 300 AGLA---PAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYG-VPWGVYPA 355
++ P P S P + G+ +A P Q G VP G P+
Sbjct: 771 PQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS 830
Query: 356 NLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAA 415
Q + + + + + PG Q + G G P P ++ Q+A + AAA
Sbjct: 831 AGMQNRPFPG-----NMSSMTPSSPGMSQ--QGGPGMGPPMPTVNRKAQEAAAAVMQAAA 883
Query: 416 NPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAA 475
N + QG GM ++A ++ Y Q + + AP MAP
Sbjct: 884 NSAQS-RQGSFPGMNQSGLMASSSPYSQP---MNNSSSLMNTQAPPYSMAP--------- 930
Query: 476 AQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQS 535
A ++AA+ G A ++ + L P+ ++ QP + +S Y S ++
Sbjct: 931 AMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPES--KSKDSYSSQGISQPPTP 988
Query: 536 SSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSAT 583
+L P P S S+ G+ + + G+ + S SSS+T
Sbjct: 989 GNLPVPSPMSPSSASISSFHGDESDSI---SSPGWPKTPSSPKSSSST 1033
Score = 50.1 bits (118), Expect = 1e-05
Identities = 79/341 (23%), Positives = 113/341 (33%), Gaps = 49/341 (14%)
Query: 343 PQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQ 402
P+Y P + Q QAAAA QQAA+ G+ GA +P
Sbjct: 380 PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM----GAQYAAASPAWAAA 435
Query: 403 GQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAY------YDQTGALVVGPGARTG 456
Q++ + PT+ QG + M + P Y + Q PG G
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQG--SPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
Query: 457 LGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGL--FRPIGTQPPQQQQQQP 514
P R P+ I A A G+ + G QP QQ QP
Sbjct: 494 PPGPQRY----PIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP 549
Query: 515 STNLQSNSFYGSSSLTNSSQSSSLFSHG----------PGQPGSTSLGF------GSGNS 558
+ S S + G PG+P L S
Sbjct: 550 PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPD 609
Query: 559 LGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSS 618
L +I +G +++ S+ S+S S S+ D + S +P P +S+ S
Sbjct: 610 LSGSIDDLPTGTEATLSSAVSASG----STSSQGDQSNPAQSPFSPHASPHLSSIPGGPS 665
Query: 619 PSPIGMPL-----------PSQTPGHSLTPPPSLSSHGSSS 648
PSP+G P+ P+ PG + P P S SSS
Sbjct: 666 PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSS 706
Score = 49.3 bits (116), Expect = 2e-05
Identities = 109/459 (23%), Positives = 154/459 (33%), Gaps = 102/459 (22%)
Query: 261 QQQL--FQRTNALTVQQLTAAQQQQYALAA-----------------AQQPHIAGVFSAG 301
QQQL FQ+ QQ QQQQ+ ++ +QP G +
Sbjct: 49 QQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA 108
Query: 302 LAPAAFVPNPYIIS-------AAPPGTDP----YTAAGLAAAATLAGPAVVPPQYYGVPW 350
A P P ++S A P +P Y GL A T P VP G P
Sbjct: 109 AGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG-PA 167
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
V N + AA A+ + Q G QQ +P G + + A
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ-----------SPGMGMMHSASAAAA 216
Query: 411 AAAAANPTL-----AFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMA 465
A + L + PGY P A G G G+ G G
Sbjct: 217 GAPGSMDPLQNSHEGYPNSQCNHYPGYS--RPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
Query: 466 PTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYG 525
+AAA AAAAAA GG GS+ G YG
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG--------------------------YG 308
Query: 526 SSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSS---ASSSA 582
L++ Q GPG G+ SL AA GSA GF G + + ++
Sbjct: 309 --VLSSPRQQGGGMMMGPGGGGAASLS-------KAAAGSAAGGFQRFAGQNQHPSGATP 359
Query: 583 TRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLS 642
T + L++ S + + S P S+ P P PSQ + +
Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSP-------SAPPPP-----PSQPQSQAAAAGAAAG 407
Query: 643 SHGSSSSLHLGGLTNGSGRYISAAPG-AEAKYRSASSTS 680
+++ + LG + +Y +A+P A A+ RS + S
Sbjct: 408 GQQAAAGMGLG--KDMGAQYAAASPAWAAAQQRSHPAMS 444
Score = 46.6 bits (109), Expect = 1e-04
Identities = 70/330 (21%), Positives = 125/330 (37%), Gaps = 42/330 (12%)
Query: 354 PANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP-------------LTPNQG 400
P + Q + + ++S A SQ+ Q++ AG + P ++P+
Sbjct: 689 PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS 748
Query: 401 QQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAP 460
GQ +++ +N + +G ++ P P AY A GPG G+ A
Sbjct: 749 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 808
Query: 461 VRLMAPTPVLISSAAAQAAAAAAA------GGTASSLTGSTNGLFRP--IGTQPP----- 507
++ P A +A G SS+T S+ G+ + G PP
Sbjct: 809 NQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVN 868
Query: 508 QQQQQQPSTNLQSNSFYGSS---SLTNSSQSSSLFSHGP-GQPGSTSLGFGSGNSLGAAI 563
++ Q+ + +Q+ + S S +QS + S P QP + S + + ++
Sbjct: 869 RKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSM 928
Query: 564 GSAL-SGFGSSVG-SSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSP 621
A+ + +SVG + S + L +D + + + Y+S G S P+P
Sbjct: 929 APAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTP 988
Query: 622 IGMPLPSQTPGHSLTPPPSLSSHGSSSSLH 651
+P+PS P S S SS H
Sbjct: 989 GNLPVPS----------PMSPSSASISSFH 1008
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 50.8 bits (120), Expect = 7e-06
Identities = 100/382 (26%), Positives = 142/382 (37%), Gaps = 66/382 (17%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPG-------TDPYTAAGLAAAATLAG 337
+LA + A + GLA A P + S+ PG T + + A
Sbjct: 1492 SLAPSGASPSASALTLGLATA-----PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACS 1546
Query: 338 PAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQP--GQQQVLRAGAGQRPL 395
P +VP P+ P Q + A ++ASQ A+ P Q + A + PL
Sbjct: 1547 PVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPL 1606
Query: 396 TP------NQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVV 449
P + G A S P+ G LA+ P V APT V+
Sbjct: 1607 APLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASP---VPAPTP--------VL 1655
Query: 450 GPGA-RTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQ 508
P + +T L APV P+P + A A A GG++ S T S G P G P Q
Sbjct: 1656 APSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSL-GTGNPQGPFPTQ 1714
Query: 509 QQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALS 568
P+ SS + +Q+ SL PG P G +L A L+
Sbjct: 1715 TLSLTPA----------SSLVPTPAQTLSL---APGPP------LGPTQTLSLAPAPPLA 1755
Query: 569 GFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPS 628
S VG + + + T + S S+S LAP +L S +P P P +
Sbjct: 1756 P-ASPVGPAPAHTLTLAPASS--------SASLLAPAS---VQTLTLSPAPVPTLGPAAA 1803
Query: 629 QTPGHSLTPPPSLSSHGSSSSL 650
QT +L P + S +SSL
Sbjct: 1804 QT--LALAPASTQSPASQASSL 1823
Score = 41.2 bits (95), Expect = 0.005
Identities = 81/341 (23%), Positives = 116/341 (34%), Gaps = 59/341 (17%)
Query: 302 LAPAA---FVPNPYIISAAPPGTDPYTAAGLAAAATLAG--PAVVPPQYYGVPWGVYPAN 356
LAP++ +P P P + A A A TL G P+ G P G +P
Sbjct: 1655 LAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQ 1714
Query: 357 LFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAAN 416
T S AS P Q L G PL P Q A LA A+
Sbjct: 1715 ------------TLSLTPASSLVPTPAQTLSLAPGP-PLGPTQTLSLAPAPPLAPASPVG 1761
Query: 417 PTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLG-APVRLMAPTPVLISSAA 475
P A LA +LAP + L + P LG A + +A P S A
Sbjct: 1762 PAPAHTLTLAPASSSASLLAPASVQ----TLTLSPAPVPTLGPAAAQTLALAPASTQSPA 1817
Query: 476 AQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQS 535
+QA++ + A+ L + + ++ P + + + L+S
Sbjct: 1818 SQASSLVVSASGAAPLPVT-------MVSRLPVSKDEPDTLTLRS--------------- 1855
Query: 536 SSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLY 595
GP P ST+ FG S F R E L L
Sbjct: 1856 ------GPPSPPSTATSFGGPRPRRQPPPPPRSPFYLD-SLEEKRKRQRSERLERIFQL- 1907
Query: 596 KRSSSSLAPIGQPFYNS--LGFSSSPSPIGMPLPSQTPGHS 634
+ +LAP+ Y + L F + P P+ P+ ++PG S
Sbjct: 1908 SEAHGALAPV----YGTEVLDFCTLPQPVASPIGPRSPGPS 1944
Score = 35.4 bits (80), Expect = 0.29
Identities = 48/199 (24%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 480 AAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLF 539
A AA T+SS T S G P +PP+++ +S +
Sbjct: 2696 AEVAAPSTSSSATSSPEG---PSPARPPRRR---------------------TSADVEIR 2731
Query: 540 SHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSS 599
G G+PG G + L G +V RR+ +S L S
Sbjct: 2732 GQGTGRPGQPP---------GPKVLRKLPGRLVTVVEEKELVRRRRQQRGAASTLVPGVS 2782
Query: 600 SSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPS----LSSHGSSSSLHLGGL 655
+ A G P S+ S PIG P + P SL PP H G
Sbjct: 2783 ETSASPGSPSVRSMSGPESSPPIGGPCEA-APSSSLPTPPQQPFIARRHIELGVTGGGSP 2841
Query: 656 TNGSGRYISAAPGAEAKYR 674
NG G ++ P A + R
Sbjct: 2842 ENGDGALLAITPPAVKRRR 2860
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/292 (26%), Positives = 105/292 (35%), Gaps = 35/292 (11%)
Query: 294 IAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP---PQYYGVPW 350
+ GV+ G+ P A P ++ P G A A P V P PQ GVP
Sbjct: 146 LPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPL 204
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
G YP + T + G AGA + P G QA A
Sbjct: 205 G-YPIKAPKLPGGYGLPYTTGKLPYGYGPGGV-----AGAAGKAGYPTGTGVGPQA---A 255
Query: 411 AAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG-PGARTGLGAPVRLMAPTPV 469
AAAAA FG G A +PG GA V G PGA G+G + P
Sbjct: 256 AAAAAKAAAKFGAGAAGVLPGVG-----------GAGVPGVPGAIPGIGGIAGVGTPAAA 304
Query: 470 LISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGT------QPPQQQQQQPSTNLQSNSF 523
++AAA+AA AA G G G+ G P P + +
Sbjct: 305 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAV 364
Query: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVG 575
G S ++++++ + +PG +G G + G G GFG VG
Sbjct: 365 PGVVSPEAAAKAAAKAAKYGARPG---VGVGGIPTYGVGAG-GFPGFGVGVG 412
Score = 43.1 bits (100), Expect = 0.001
Identities = 67/206 (32%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 344
A AAA+ V G+AP V PG GLA +A V P
Sbjct: 443 AAAAAKAAKYGLVPGVGVAPGVGVA---------PGVGVAPGVGLAPGVGVAPGVGVAPG 493
Query: 345 YYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQ 404
GV G+ P + AAAA + A A +Q LRA AG P G G
Sbjct: 494 V-GVAPGIGPGGV-----AAAAKSAAKVAAKAQ--------LRAAAGLGAGIPGLGV-GV 538
Query: 405 QAESLAAAAAANPTLAFGQGLAT--GMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVR 462
L A P L G G+ +PG A A Y GA V PG GLGA
Sbjct: 539 GVPGLGVGAGV-PGLGVGAGVPGFGAVPGALAAAKAAKY---GAAV--PGVLGGLGALGG 592
Query: 463 LMAPTPVLISSAAAQAAAAAAAGGTA 488
+ P V+ + AA AAAA AA A
Sbjct: 593 VGIPGGVVGAGPAAAAAAAKAAAKAA 618
Score = 39.7 bits (91), Expect = 0.015
Identities = 91/418 (21%), Positives = 143/418 (34%), Gaps = 64/418 (15%)
Query: 286 LAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAP---PGTDPYTAAGLAAAATL-AGPAVV 341
+A P A +A A + ++ P PG AG+ AG VV
Sbjct: 295 IAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVV 354
Query: 342 PPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP------- 394
P G+P P + + AA AA A A G GAG P
Sbjct: 355 PGA--GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG 412
Query: 395 -LTPNQGQQG----------------QQAESLAAAAAANPTLAFGQGLATGM---PGYQV 434
+ G G +A++ AAA AA L G G+A G+ PG V
Sbjct: 413 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 472
Query: 435 LAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS 494
AP + G G G+G + P V ++ +A AA A A+ L
Sbjct: 473 -APGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAG 530
Query: 495 TNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFG 554
GL +G P + + G ++ + ++ +G PG G
Sbjct: 531 IPGLGVGVGVPGLGVGAGVPGLGVGA-GVPGFGAVPGALAAAKAAKYGAAVPGVLG---G 586
Query: 555 SGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLG 614
G G I + G G + ++A+ +A + ++ +G LG
Sbjct: 587 LGALGGVGIPGGVVGAGPAAAAAAAKAAAK--------------AAQFGLVGAAGLGGLG 632
Query: 615 FSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRY----ISAAPG 668
+G+P G PP + + + LGG+ G+G++ ++A PG
Sbjct: 633 VGG----LGVP---GVGGLGGIPPAAAAKAAKYGAAGLGGVLGGAGQFPLGGVAARPG 683
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/292 (26%), Positives = 105/292 (35%), Gaps = 35/292 (11%)
Query: 294 IAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP---PQYYGVPW 350
+ GV+ G+ P A P ++ P G A A P V P PQ GVP
Sbjct: 151 LPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPL 209
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
G YP + T + G AGA + P G QA A
Sbjct: 210 G-YPIKAPKLPGGYGLPYTTGKLPYGYGPGGV-----AGAAGKAGYPTGTGVGPQA---A 260
Query: 411 AAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG-PGARTGLGAPVRLMAPTPV 469
AAAAA FG G A +PG GA V G PGA G+G + P
Sbjct: 261 AAAAAKAAAKFGAGAAGVLPGVG-----------GAGVPGVPGAIPGIGGIAGVGTPAAA 309
Query: 470 LISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGT------QPPQQQQQQPSTNLQSNSF 523
++AAA+AA AA G G G+ G P P + +
Sbjct: 310 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAV 369
Query: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVG 575
G S ++++++ + +PG +G G + G G GFG VG
Sbjct: 370 PGVVSPEAAAKAAAKAAKYGARPG---VGVGGIPTYGVGAG-GFPGFGVGVG 417
Score = 43.5 bits (101), Expect = 0.001
Identities = 67/206 (32%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 344
A AAA+ V G+AP V PG GLA +A V P
Sbjct: 467 AKAAAKAAQFGLVPGVGVAPGVGVA---------PGVGVAPGVGLAPGVGVAPGVGVAPG 517
Query: 345 YYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQ 404
GV G+ P + AAAA + A A +Q LRA AG P G G
Sbjct: 518 V-GVAPGIGPGGV-----AAAAKSAAKVAAKAQ--------LRAAAGLGAGIPGLGV-GV 562
Query: 405 QAESLAAAAAANPTLAFGQGLAT--GMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVR 462
L A P L G G+ +PG A A Y GA V PG GLGA
Sbjct: 563 GVPGLGVGAGV-PGLGVGAGVPGFGAVPGALAAAKAAKY---GAAV--PGVLGGLGALGG 616
Query: 463 LMAPTPVLISSAAAQAAAAAAAGGTA 488
+ P V+ + AA AAAA AA A
Sbjct: 617 VGIPGGVVGAGPAAAAAAAKAAAKAA 642
Score = 33.9 bits (76), Expect = 0.84
Identities = 77/282 (27%), Positives = 98/282 (34%), Gaps = 45/282 (15%)
Query: 311 PYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTA 370
PY P G P G+A AA AG Y GV P Q AAAAA A
Sbjct: 225 PYTTGKLPYGYGP---GGVAGAAGKAG--------YPTGTGVGP-----QAAAAAAAKAA 268
Query: 371 SQQAASQAQ--PGQQQVLRAGA-GQRPLTPNQGQQGQQAESLAAAAAANPT-LAFGQGLA 426
++ A A PG G G P G A + AAAAAA GL
Sbjct: 269 AKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 328
Query: 427 TGMPGYQ---VLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAA 483
G PG+ V P A G G G G P A P ++S AA AAA A
Sbjct: 329 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG---AAVPGVVSPEAAAKAAAKA 385
Query: 484 AGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSS-SLTNSSQSSSLFSHG 542
A G +P P+ + + F G + + + G
Sbjct: 386 A----------------KYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG 429
Query: 543 --PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSA 582
PG G +G AA +A G G+ ++A ++A
Sbjct: 430 GVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAA 471
Score = 31.2 bits (69), Expect = 5.4
Identities = 60/206 (29%), Positives = 72/206 (34%), Gaps = 25/206 (12%)
Query: 292 PHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWG 351
P + GV G++P A AA G AA AAA A +VP GV G
Sbjct: 432 PGVGGVPGVGISPEAQAAAA--AKAAKYGVGTPAAAAAKAAAKAAQFGLVP----GV--G 483
Query: 352 VYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP---LTPNQGQQGQQAES 408
V P A A PG + G G P + P G G A +
Sbjct: 484 VAPG-------VGVAPGVGVAPGVGLA-PGVG--VAPGVGVAPGVGVAPGIGPGGVAAAA 533
Query: 409 LAAA-AAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPT 467
+AA AA L GL G+PG V GA V PG G G P P
Sbjct: 534 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGV--PGLGVGAGVPGFGAVPG 590
Query: 468 PVLISSAAAQAAAAAAAGGTASSLTG 493
+ + AA AA G +L G
Sbjct: 591 ALAAAKAAKYGAAVPGVLGGLGALGG 616
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/292 (26%), Positives = 105/292 (35%), Gaps = 35/292 (11%)
Query: 294 IAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP---PQYYGVPW 350
+ GV+ G+ P A P ++ P G A A P V P PQ GVP
Sbjct: 151 LPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPL 209
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
G YP + T + G AGA + P G QA A
Sbjct: 210 G-YPIKAPKLPGGYGLPYTTGKLPYGYGPGGV-----AGAAGKAGYPTGTGVGPQA---A 260
Query: 411 AAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG-PGARTGLGAPVRLMAPTPV 469
AAAAA FG G A +PG GA V G PGA G+G + P
Sbjct: 261 AAAAAKAAAKFGAGAAGVLPGVG-----------GAGVPGVPGAIPGIGGIAGVGTPAAA 309
Query: 470 LISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGT------QPPQQQQQQPSTNLQSNSF 523
++AAA+AA AA G G G+ G P P + +
Sbjct: 310 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAV 369
Query: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVG 575
G S ++++++ + +PG +G G + G G GFG VG
Sbjct: 370 PGVVSPEAAAKAAAKAAKYGARPG---VGVGGIPTYGVGAG-GFPGFGVGVG 417
Score = 43.1 bits (100), Expect = 0.001
Identities = 67/206 (32%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 344
A AAA+ V G+AP V PG GLA +A V P
Sbjct: 448 AAAAAKAAKYGLVPGVGVAPGVGVA---------PGVGVAPGVGLAPGVGVAPGVGVAPG 498
Query: 345 YYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQ 404
GV G+ P + AAAA + A A +Q LRA AG P G G
Sbjct: 499 V-GVAPGIGPGGV-----AAAAKSAAKVAAKAQ--------LRAAAGLGAGIPGLGV-GV 543
Query: 405 QAESLAAAAAANPTLAFGQGLAT--GMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVR 462
L A P L G G+ +PG A A Y GA V PG GLGA
Sbjct: 544 GVPGLGVGAGV-PGLGVGAGVPGFGAVPGALAAAKAAKY---GAAV--PGVLGGLGALGG 597
Query: 463 LMAPTPVLISSAAAQAAAAAAAGGTA 488
+ P V+ + AA AAAA AA A
Sbjct: 598 VGIPGGVVGAGPAAAAAAAKAAAKAA 623
Score = 34.7 bits (78), Expect = 0.49
Identities = 75/330 (22%), Positives = 113/330 (34%), Gaps = 39/330 (11%)
Query: 286 LAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAP---PGTDPYTAAGLAAAATL-AGPAVV 341
+A P A +A A + ++ P PG AG+ AG VV
Sbjct: 300 IAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVV 359
Query: 342 PPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP------- 394
P G+P P + + AA AA A A G GAG P
Sbjct: 360 PGA--GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG 417
Query: 395 -LTPNQGQQG----------------QQAESLAAAAAANPTLAFGQGLATGM---PGYQV 434
+ G G +A++ AAA AA L G G+A G+ PG V
Sbjct: 418 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 477
Query: 435 LAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS 494
AP + G G G+G + P V ++ +A AA A A+ L
Sbjct: 478 -APGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAG 535
Query: 495 TNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFG 554
GL +G P + + G ++ + ++ +G PG G
Sbjct: 536 IPGLGVGVGVPGLGVGAGVPGLGVGA-GVPGFGAVPGALAAAKAAKYGAAVPGVLG---G 591
Query: 555 SGNSLGAAIGSALSGFGSSVGSSASSSATR 584
G G I + G G + ++A+ +A +
Sbjct: 592 LGALGGVGIPGGVVGAGPAAAAAAAKAAAK 621
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/292 (26%), Positives = 105/292 (35%), Gaps = 35/292 (11%)
Query: 294 IAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP---PQYYGVPW 350
+ GV+ G+ P A P ++ P G A A P V P PQ GVP
Sbjct: 136 LPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPL 194
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
G YP + T + G AGA + P G QA A
Sbjct: 195 G-YPIKAPKLPGGYGLPYTTGKLPYGYGPGGV-----AGAAGKAGYPTGTGVGPQA---A 245
Query: 411 AAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG-PGARTGLGAPVRLMAPTPV 469
AAAAA FG G A +PG GA V G PGA G+G + P
Sbjct: 246 AAAAAKAAAKFGAGAAGVLPGVG-----------GAGVPGVPGAIPGIGGIAGVGTPAAA 294
Query: 470 LISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGT------QPPQQQQQQPSTNLQSNSF 523
++AAA+AA AA G G G+ G P P + +
Sbjct: 295 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAV 354
Query: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVG 575
G S ++++++ + +PG +G G + G G GFG VG
Sbjct: 355 PGVVSPEAAAKAAAKAAKYGARPG---VGVGGIPTYGVGAG-GFPGFGVGVG 402
Score = 43.1 bits (100), Expect = 0.001
Identities = 67/206 (32%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 344
A AAA+ V G+AP V PG GLA +A V P
Sbjct: 433 AAAAAKAAKYGLVPGVGVAPGVGVA---------PGVGVAPGVGLAPGVGVAPGVGVAPG 483
Query: 345 YYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQ 404
GV G+ P + AAAA + A A +Q LRA AG P G G
Sbjct: 484 V-GVAPGIGPGGV-----AAAAKSAAKVAAKAQ--------LRAAAGLGAGIPGLGV-GV 528
Query: 405 QAESLAAAAAANPTLAFGQGLAT--GMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVR 462
L A P L G G+ +PG A A Y GA V PG GLGA
Sbjct: 529 GVPGLGVGAGV-PGLGVGAGVPGFGAVPGALAAAKAAKY---GAAV--PGVLGGLGALGG 582
Query: 463 LMAPTPVLISSAAAQAAAAAAAGGTA 488
+ P V+ + AA AAAA AA A
Sbjct: 583 VGIPGGVVGAGPAAAAAAAKAAAKAA 608
Score = 34.7 bits (78), Expect = 0.49
Identities = 75/330 (22%), Positives = 113/330 (34%), Gaps = 39/330 (11%)
Query: 286 LAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAP---PGTDPYTAAGLAAAATL-AGPAVV 341
+A P A +A A + ++ P PG AG+ AG VV
Sbjct: 285 IAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVV 344
Query: 342 PPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP------- 394
P G+P P + + AA AA A A G GAG P
Sbjct: 345 PGA--GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG 402
Query: 395 -LTPNQGQQG----------------QQAESLAAAAAANPTLAFGQGLATGM---PGYQV 434
+ G G +A++ AAA AA L G G+A G+ PG V
Sbjct: 403 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 462
Query: 435 LAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGS 494
AP + G G G+G + P V ++ +A AA A A+ L
Sbjct: 463 -APGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAG 520
Query: 495 TNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFG 554
GL +G P + + G ++ + ++ +G PG G
Sbjct: 521 IPGLGVGVGVPGLGVGAGVPGLGVGA-GVPGFGAVPGALAAAKAAKYGAAVPGVLG---G 576
Query: 555 SGNSLGAAIGSALSGFGSSVGSSASSSATR 584
G G I + G G + ++A+ +A +
Sbjct: 577 LGALGGVGIPGGVVGAGPAAAAAAAKAAAK 606
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 50.1 bits (118), Expect = 1e-05
Identities = 78/292 (26%), Positives = 105/292 (35%), Gaps = 35/292 (11%)
Query: 294 IAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP---PQYYGVPW 350
+ GV+ G+ P A P ++ P G A A P V P PQ GVP
Sbjct: 146 LPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPL 204
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
G YP + T + G AGA + P G QA A
Sbjct: 205 G-YPIKAPKLPGGYGLPYTTGKLPYGYGPGGV-----AGAAGKAGYPTGTGVGPQA---A 255
Query: 411 AAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVG-PGARTGLGAPVRLMAPTPV 469
AAAAA FG G A +PG GA V G PGA G+G + P
Sbjct: 256 AAAAAKAAAKFGAGAAGVLPGVG-----------GAGVPGVPGAIPGIGGIAGVGTPAAA 304
Query: 470 LISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGT------QPPQQQQQQPSTNLQSNSF 523
++AAA+AA AA G G G+ G P P + +
Sbjct: 305 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAV 364
Query: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVG 575
G S ++++++ + +PG +G G + G G GFG VG
Sbjct: 365 PGVVSPEAAAKAAAKAAKYGARPG---VGVGGIPTYGVGAG-GFPGFGVGVG 412
Score = 43.5 bits (101), Expect = 0.001
Identities = 67/206 (32%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 285 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 344
A AAA+ V G+AP V PG GLA +A V P
Sbjct: 462 AKAAAKAAQFGLVPGVGVAPGVGVA---------PGVGVAPGVGLAPGVGVAPGVGVAPG 512
Query: 345 YYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQ 404
GV G+ P + AAAA + A A +Q LRA AG P G G
Sbjct: 513 V-GVAPGIGPGGV-----AAAAKSAAKVAAKAQ--------LRAAAGLGAGIPGLGV-GV 557
Query: 405 QAESLAAAAAANPTLAFGQGLAT--GMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVR 462
L A P L G G+ +PG A A Y GA V PG GLGA
Sbjct: 558 GVPGLGVGAGV-PGLGVGAGVPGFGAVPGALAAAKAAKY---GAAV--PGVLGGLGALGG 611
Query: 463 LMAPTPVLISSAAAQAAAAAAAGGTA 488
+ P V+ + AA AAAA AA A
Sbjct: 612 VGIPGGVVGAGPAAAAAAAKAAAKAA 637
Score = 35.8 bits (81), Expect = 0.22
Identities = 102/434 (23%), Positives = 149/434 (34%), Gaps = 64/434 (14%)
Query: 268 TNALTVQQLTAAQQQQYALAAAQQPH-------IAGVFSAGL-------APAAFVPNPYI 313
T A AA+ +Y AA P + GV AG+ A VP I
Sbjct: 300 TPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGI 359
Query: 314 ISAAPPGT-DPYTAAGLAAAATLAG--PAV----VPPQYYGVPWGVYPANLFQQQAAAAA 366
AA PG P AA AA A G P V +P YGV G +P
Sbjct: 360 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT--YGVGAGGFPGF----GVGVGG 413
Query: 367 NNTASQQAASQAQPGQQQVLRAGAG---QRPLTPNQGQQGQQAESLAAAAAANPTLAFGQ 423
+ PG V G Q + G + AAA AA FG
Sbjct: 414 IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGL 473
Query: 424 GLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLG-APVRLMAP--TPVLISSAAAQAA- 479
G+ +AP L G G G+G AP +AP P +++AA AA
Sbjct: 474 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAK 533
Query: 480 -AAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSL 538
AA A A+ L GL +G P + + G ++ + ++
Sbjct: 534 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA-GVPGFGAVPGALAAAKA 592
Query: 539 FSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRS 598
+G PG G G G I + G G + ++A+ +A +
Sbjct: 593 AKYGAAVPGVLG---GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK-------------- 635
Query: 599 SSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNG 658
++ +G LG +G+P G PP + + + LGG+ G
Sbjct: 636 AAQFGLVGAAGLGGLGVGG----LGVP---GVGGLGGIPPAAAAKAAKYGAAGLGGVLGG 688
Query: 659 SGRY----ISAAPG 668
+G++ ++A PG
Sbjct: 689 AGQFPLGGVAARPG 702
Score = 33.9 bits (76), Expect = 0.84
Identities = 77/282 (27%), Positives = 98/282 (34%), Gaps = 45/282 (15%)
Query: 311 PYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTA 370
PY P G P G+A AA AG Y GV P Q AAAAA A
Sbjct: 220 PYTTGKLPYGYGP---GGVAGAAGKAG--------YPTGTGVGP-----QAAAAAAAKAA 263
Query: 371 SQQAASQAQ--PGQQQVLRAGA-GQRPLTPNQGQQGQQAESLAAAAAANPT-LAFGQGLA 426
++ A A PG G G P G A + AAAAAA GL
Sbjct: 264 AKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 323
Query: 427 TGMPGYQ---VLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAA 483
G PG+ V P A G G G G P A P ++S AA AAA A
Sbjct: 324 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG---AAVPGVVSPEAAAKAAAKA 380
Query: 484 AGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSS-SLTNSSQSSSLFSHG 542
A G +P P+ + + F G + + + G
Sbjct: 381 A----------------KYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG 424
Query: 543 --PGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSA 582
PG G +G AA +A G G+ ++A ++A
Sbjct: 425 GVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAA 466
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 50.1 bits (118), Expect = 1e-05
Identities = 75/293 (25%), Positives = 103/293 (35%), Gaps = 58/293 (19%)
Query: 318 PPGTDPYTAA----GLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQ 373
PP T P+ A L + GP +PP VP +PA L A N
Sbjct: 871 PPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTSVPPAAFPAPLVTPMVALVLPNYLFPT 930
Query: 374 AASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQ 433
+S GA Q P AE A+ +P+ P
Sbjct: 931 PSSYPY---------GALQTP-----------AEGPPTPASHSPS-----------PSLP 959
Query: 434 VLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTG 493
LAP+ + L + +P++L +L +A AA AGG SS
Sbjct: 960 ALAPSPPHRPDSPLF-----NSRCSSPLQLN----LLQLEELPRAEGAAVAGGPGSSA-- 1008
Query: 494 STNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGF 553
G PP + +P L + SS+ S SS L + + G
Sbjct: 1009 ---------GPPPPSAEAAEPEARLAEVT--ESSNQDALSGSSDLLELLLQEDSRSGTGS 1057
Query: 554 GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 606
+ SLG+ +GS SG GS G S S+S TR S +S + SS A G
Sbjct: 1058 AASGSLGSGLGSG-SGSGSHEGGSTSASITRSSQSSHTSKYFGSIDSSEAEAG 1109
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 50.1 bits (118), Expect = 1e-05
Identities = 79/341 (23%), Positives = 113/341 (33%), Gaps = 49/341 (14%)
Query: 343 PQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQ 402
P+Y P + Q QAAAA QQAA+ G+ GA +P
Sbjct: 380 PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM----GAQYAAASPAWAAA 435
Query: 403 GQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAY------YDQTGALVVGPGARTG 456
Q++ + PT+ QG + M + P Y + Q PG G
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQG--SPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
Query: 457 LGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGL--FRPIGTQPPQQQQQQP 514
P R P+ I A A G+ + G QP QQ QP
Sbjct: 494 PPGPQRY----PIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP 549
Query: 515 STNLQSNSFYGSSSLTNSSQSSSLFSHG----------PGQPGSTSLGF------GSGNS 558
+ S S + G PG+P L S
Sbjct: 550 PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPD 609
Query: 559 LGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSS 618
L +I +G +++ S+ S+S S S+ D + S +P P +S+ S
Sbjct: 610 LSGSIDDLPTGTEATLSSAVSASG----STSSQGDQSNPAQSPFSPHASPHLSSIPGGPS 665
Query: 619 PSPIGMPL-----------PSQTPGHSLTPPPSLSSHGSSS 648
PSP+G P+ P+ PG + P P S SSS
Sbjct: 666 PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSS 706
Score = 49.3 bits (116), Expect = 2e-05
Identities = 109/459 (23%), Positives = 154/459 (33%), Gaps = 102/459 (22%)
Query: 261 QQQL--FQRTNALTVQQLTAAQQQQYALAA-----------------AQQPHIAGVFSAG 301
QQQL FQ+ QQ QQQQ+ ++ +QP G +
Sbjct: 49 QQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA 108
Query: 302 LAPAAFVPNPYIIS-------AAPPGTDP----YTAAGLAAAATLAGPAVVPPQYYGVPW 350
A P P ++S A P +P Y GL A T P VP G P
Sbjct: 109 AGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG-PA 167
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
V N + AA A+ + Q G QQ +P G + + A
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ-----------SPGMGMMHSASAAAA 216
Query: 411 AAAAANPTL-----AFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMA 465
A + L + PGY P A G G G+ G G
Sbjct: 217 GAPGSMDPLQNSHEGYPNSQCNHYPGYS--RPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
Query: 466 PTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYG 525
+AAA AAAAAA GG GS+ G YG
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG--------------------------YG 308
Query: 526 SSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSS---ASSSA 582
L++ Q GPG G+ SL AA GSA GF G + + ++
Sbjct: 309 --VLSSPRQQGGGMMMGPGGGGAASLS-------KAAAGSAAGGFQRFAGQNQHPSGATP 359
Query: 583 TRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLS 642
T + L++ S + + S P S+ P P PSQ + +
Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSP-------SAPPPP-----PSQPQSQAAAAGAAAG 407
Query: 643 SHGSSSSLHLGGLTNGSGRYISAAPG-AEAKYRSASSTS 680
+++ + LG + +Y +A+P A A+ RS + S
Sbjct: 408 GQQAAAGMGLG--KDMGAQYAAASPAWAAAQQRSHPAMS 444
Score = 46.6 bits (109), Expect = 1e-04
Identities = 78/367 (21%), Positives = 134/367 (36%), Gaps = 44/367 (11%)
Query: 182 SPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG 241
SP+ V +G N + S + P P + P S E+ + A+
Sbjct: 665 SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL-------------- 710
Query: 242 NQVPMDSSGATVGLFDYNSQQQLF--QRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFS 299
+Q PM + N Q + Q+T + Q +++ QQ + +G +
Sbjct: 711 SQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYG 770
Query: 300 AGLA---PAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYG-VPWGVYPA 355
++ P P S P + G+ +A P Q G VP G P+
Sbjct: 771 PQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS 830
Query: 356 NLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAA 415
Q + + + + + PG Q + G G P P ++ Q+A + AAA
Sbjct: 831 AGMQNRPFPG-----NMSSMTPSSPGMSQ--QGGPGMGPPMPTVNRKAQEAAAAVMQAAA 883
Query: 416 NPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAA 475
N + QG GM ++A ++ Y Q + + AP MAP
Sbjct: 884 NSAQS-RQGSFPGMNQSGLMASSSPYSQP---MNNSSSLMNTQAPPYSMAP--------- 930
Query: 476 AQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQS 535
A ++AA+ G A ++ + L P+ ++ QP +S S SSS T +
Sbjct: 931 AMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQP----ESKSKKSSSSTTTGEKI 986
Query: 536 SSLFSHG 542
+ ++ G
Sbjct: 987 TKVYELG 993
Score = 46.2 bits (108), Expect = 2e-04
Identities = 78/328 (23%), Positives = 121/328 (36%), Gaps = 61/328 (18%)
Query: 354 PANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP-------------LTPNQG 400
P + Q + + ++S A SQ+ Q++ AG + P ++P+
Sbjct: 689 PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS 748
Query: 401 QQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAP 460
GQ +++ +N + +G ++ P P AY A GPG G+ A
Sbjct: 749 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 808
Query: 461 VRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQS 520
++ P +Q A G + PS +Q+
Sbjct: 809 NQMHGQGP-------SQPCGAVPLG--------------------------RMPSAGMQN 835
Query: 521 NSFYGS-SSLTNSSQS-SSLFSHGPGQPGST---SLGFGSGNSLGAAIGSALSGFGSSVG 575
F G+ SS+T SS S G G P T + + AA SA S GS G
Sbjct: 836 RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 895
Query: 576 SSAS----SSATRRESLSTSSDLYKRSSS--SLAP-IGQPFYNSLGFSS--SPSPIGMPL 626
+ S SS+ + ++ SS L + S+AP + S+G + SP +PL
Sbjct: 896 MNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPL 955
Query: 627 PSQTPG-HSLTPPPSLSSHGSSSSLHLG 653
P + G TP P S SSSS G
Sbjct: 956 PLKADGKEEGTPQPESKSKKSSSSTTTG 983
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 49.7 bits (117), Expect = 1e-05
Identities = 96/396 (24%), Positives = 140/396 (35%), Gaps = 47/396 (11%)
Query: 272 TVQQLTAAQQQ-----QYALAAAQQPHIAGVFSAGLAPAAFVPNPYIIS--------AAP 318
T TAA Q A AA+ P + +F G PA +P ++ A P
Sbjct: 586 TTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPA--LPTTTTVTTFSQSLHTAVP 643
Query: 319 PGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQA 378
T A +TLA A + + F ++A + +
Sbjct: 644 TATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANP 703
Query: 379 QP--GQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLA 436
QP G + GA + L P+ G S A AAA P + +P Y
Sbjct: 704 QPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAAAPTPA---PPSMIKVVPAY---V 757
Query: 437 PTAYYDQTGALVVGP----GARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLT 492
PT + G + GAP + P S A AA ++G A++ T
Sbjct: 758 PTPIHPIFGGATHSAFGLKATASAFGAPA---SSQPAFGGSTAVFFGAATSSGFGATTQT 814
Query: 493 GSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLT-NSSQSSSLFSHGPGQPGSTSL 551
S+ G+ P S + +G + T SS ++ FS G GQ GST+
Sbjct: 815 ASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSTTTGAFSFGAGQSGSTAT 874
Query: 552 GFGSGNSLGA-AIGSA--LSGFGSSVGSSASS------SATRRESLSTSSDLYKRSSSSL 602
LG A+G+ + F +V S+ S +AT L+T + S SSL
Sbjct: 875 STPFAGGLGQNALGTTGQSTPFAFNVSSTTESKPVFGGTATPTFGLNTPAPGVGTSGSSL 934
Query: 603 ------APIGQPFYNSLGFSSSPSPIGMPLPSQTPG 632
AP Q F F S+ + S+TPG
Sbjct: 935 SFGASSAP-AQGFVGVAPFGSAALSFSIGAGSKTPG 969
Score = 48.1 bits (113), Expect = 4e-05
Identities = 134/594 (22%), Positives = 204/594 (34%), Gaps = 114/594 (19%)
Query: 159 RGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPNTNPSEGLGPLPNP------------ 206
+ L + DA TP Q S T + P + P+ L P NP
Sbjct: 284 QALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQTPP 343
Query: 207 -------TANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG--NQVPMDSSGAT--VGL 255
+A E S P+T +L + +GL Q PG DS T +GL
Sbjct: 344 SLPPCPESAGAATTEALSPPKTPSL--LPPLGLS--QSGPPGLLPSPSFDSKPPTTLLGL 399
Query: 256 FDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVF-------SAGLAPAAFV 308
S T+Q TA + Q + A + P + +F S+ APAA
Sbjct: 400 IPAPSMVPATDTKAPPTLQAETATKPQATS-APSPAPKQSFLFGTQNTSPSSPAAPAASS 458
Query: 309 PNPYI--ISAAPPGTDPY--TAAGLAAAATLAGPAVVP-------PQY------YGVPWG 351
P I APP ++ T G + AT + +P P + G P
Sbjct: 459 APPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPAS 518
Query: 352 V-YPANLFQQQAAAA-------------ANNTASQQAASQAQPGQQQVLRAGAGQRPLTP 397
V PA F+Q A A+ T++ + A P + G
Sbjct: 519 VPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFG---FGI 575
Query: 398 NQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGL 457
N + + + A AA+ FG AP A + G+
Sbjct: 576 NSVSSSSVSTTTSTATAASQPFLFG-------------APQA---SAASFTPAMGSIFQF 619
Query: 458 GAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTN 517
G P L T V S + A A +A+ +G + L T P Q T
Sbjct: 620 GKPPALPTTTTVTTFSQSLHTAVPTATSSSAADFSGFGSTL----ATSAPATSSQPTLT- 674
Query: 518 LQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSV--- 574
SN+ + ++ S + S PG + G G GAA + FGSS
Sbjct: 675 -FSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALAPSFGSSFTFG 733
Query: 575 GSSASSSATRRESLSTSSDLYKRSSSSLAPI-GQPFYNSLGFSSSPSPIGMPLPSQTPGH 633
S+A ++A S + + + PI G +++ G ++ S G P SQ
Sbjct: 734 NSAAPAAAPTPAPPSMIKVVPAYVPTPIHPIFGGATHSAFGLKATASAFGAPASSQ---- 789
Query: 634 SLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
+ G S+++ G T S+ GA + S+ S+SS+F S++
Sbjct: 790 --------PAFGGSTAVFFGAAT-------SSGFGATTQTASSGSSSSVFGSTT 828
Score = 33.1 bits (74), Expect = 1.4
Identities = 86/394 (21%), Positives = 136/394 (34%), Gaps = 56/394 (14%)
Query: 354 PANLFQQQAAAAANNTASQQAASQAQPGQQQV--LRAGAGQRPLTPNQGQQGQQAESLAA 411
P+ F AAA A+ S A S P + + ++ P + G +A S
Sbjct: 306 PSFTFTLPAAAPASPPTSLLAPS-TNPLLESLKKMQTPPSLPPCPESAGAATTEALSPPK 364
Query: 412 AAAANPTLAFGQGLATGM---PGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTP 468
+ P L Q G+ P + PT A + P T ++ T
Sbjct: 365 TPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATK 424
Query: 469 VLISSAAAQAAAAAAAGGT--------ASSLTGSTNGLFRPIGTQPPQQQQQ---QPSTN 517
+SA + A + GT A+ S +F+PI T PP+ +++ P +
Sbjct: 425 PQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPS 484
Query: 518 LQSNSFYGSSSLTNSSQSSSLFS---HGPGQPGSTSL----------------------- 551
+ + + SS T +S ++ F G P S L
Sbjct: 485 VTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFT 544
Query: 552 GFGSGNSLGAAIGSA----------LSGFG-SSVGSSASSSATRRESLSTSSDLYKRSSS 600
G S S A I SA GFG +SV SS+ S+ T + ++ L+ +
Sbjct: 545 GLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQA 604
Query: 601 SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSL-TPPPSLSSHGSSSSLHLGGLTNGS 659
S A P S+ P + T SL T P+ +S ++ G S
Sbjct: 605 SAASF-TPAMGSIFQFGKPPALPTTTTVTTFSQSLHTAVPTATSSSAADFSGFGSTLATS 663
Query: 660 GRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPS 693
S+ P S + + F SS++ PS
Sbjct: 664 APATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPS 697
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 49.3 bits (116), Expect = 2e-05
Identities = 109/459 (23%), Positives = 154/459 (33%), Gaps = 102/459 (22%)
Query: 261 QQQL--FQRTNALTVQQLTAAQQQQYALAA-----------------AQQPHIAGVFSAG 301
QQQL FQ+ QQ QQQQ+ ++ +QP G +
Sbjct: 49 QQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA 108
Query: 302 LAPAAFVPNPYIIS-------AAPPGTDP----YTAAGLAAAATLAGPAVVPPQYYGVPW 350
A P P ++S A P +P Y GL A T P VP G P
Sbjct: 109 AGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG-PA 167
Query: 351 GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLA 410
V N + AA A+ + Q G QQ +P G + + A
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQ-----------SPGMGMMHSASAAAA 216
Query: 411 AAAAANPTL-----AFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMA 465
A + L + PGY P A G G G+ G G
Sbjct: 217 GAPGSMDPLQNSHEGYPNSQCNHYPGYS--RPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
Query: 466 PTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYG 525
+AAA AAAAAA GG GS+ G YG
Sbjct: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG--------------------------YG 308
Query: 526 SSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSS---ASSSA 582
L++ Q GPG G+ SL AA GSA GF G + + ++
Sbjct: 309 --VLSSPRQQGGGMMMGPGGGGAASLS-------KAAAGSAAGGFQRFAGQNQHPSGATP 359
Query: 583 TRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLS 642
T + L++ S + + S P S+ P P PSQ + +
Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSP-------SAPPPP-----PSQPQSQAAAAGAAAG 407
Query: 643 SHGSSSSLHLGGLTNGSGRYISAAPG-AEAKYRSASSTS 680
+++ + LG + +Y +A+P A A+ RS + S
Sbjct: 408 GQQAAAGMGLG--KDMGAQYAAASPAWAAAQQRSHPAMS 444
Score = 47.0 bits (110), Expect = 1e-04
Identities = 79/352 (22%), Positives = 113/352 (32%), Gaps = 58/352 (16%)
Query: 343 PQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQ 402
P+Y P + Q QAAAA QQAA+ G+ GA +P
Sbjct: 380 PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM----GAQYAAASPAWAAA 435
Query: 403 GQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAY------YDQTGALVVGPGARTG 456
Q++ + PT+ QG + M + P Y + Q PG G
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQG--SPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
Query: 457 LGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPI-------------G 503
P R P + + A A + T P G
Sbjct: 494 PPGPQRY--PIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQG 551
Query: 504 TQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHG----------PGQPGSTSLGF 553
QP QQ QP + S S + G PG+P L
Sbjct: 552 QQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNL 611
Query: 554 ------GSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQ 607
S L +I +G +++ S+ S+S S S+ D + S +P
Sbjct: 612 IQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG----STSSQGDQSNPAQSPFSPHAS 667
Query: 608 PFYNSLGFSSSPSPIGMPL-----------PSQTPGHSLTPPPSLSSHGSSS 648
P +S+ SPSP+G P+ P+ PG + P P S SSS
Sbjct: 668 PHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSS 719
Score = 46.6 bits (109), Expect = 1e-04
Identities = 78/367 (21%), Positives = 134/367 (36%), Gaps = 44/367 (11%)
Query: 182 SPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG 241
SP+ V +G N + S + P P + P S E+ + A+
Sbjct: 678 SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL-------------- 723
Query: 242 NQVPMDSSGATVGLFDYNSQQQLF--QRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFS 299
+Q PM + N Q + Q+T + Q +++ QQ + +G +
Sbjct: 724 SQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYG 783
Query: 300 AGLA---PAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYG-VPWGVYPA 355
++ P P S P + G+ +A P Q G VP G P+
Sbjct: 784 PQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS 843
Query: 356 NLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAA 415
Q + + + + + PG Q + G G P P ++ Q+A + AAA
Sbjct: 844 AGMQNRPFPG-----NMSSMTPSSPGMSQ--QGGPGMGPPMPTVNRKAQEAAAAVMQAAA 896
Query: 416 NPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAA 475
N + QG GM ++A ++ Y Q + + AP MAP
Sbjct: 897 NSAQS-RQGSFPGMNQSGLMASSSPYSQP---MNNSSSLMNTQAPPYSMAP--------- 943
Query: 476 AQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQS 535
A ++AA+ G A ++ + L P+ ++ QP +S S SSS T +
Sbjct: 944 AMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQP----ESKSKKSSSSTTTGEKI 999
Query: 536 SSLFSHG 542
+ ++ G
Sbjct: 1000 TKVYELG 1006
Score = 46.2 bits (108), Expect = 2e-04
Identities = 78/328 (23%), Positives = 121/328 (36%), Gaps = 61/328 (18%)
Query: 354 PANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP-------------LTPNQG 400
P + Q + + ++S A SQ+ Q++ AG + P ++P+
Sbjct: 702 PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS 761
Query: 401 QQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAP 460
GQ +++ +N + +G ++ P P AY A GPG G+ A
Sbjct: 762 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 821
Query: 461 VRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQS 520
++ P +Q A G + PS +Q+
Sbjct: 822 NQMHGQGP-------SQPCGAVPLG--------------------------RMPSAGMQN 848
Query: 521 NSFYGS-SSLTNSSQS-SSLFSHGPGQPGST---SLGFGSGNSLGAAIGSALSGFGSSVG 575
F G+ SS+T SS S G G P T + + AA SA S GS G
Sbjct: 849 RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 908
Query: 576 SSAS----SSATRRESLSTSSDLYKRSSS--SLAP-IGQPFYNSLGFSS--SPSPIGMPL 626
+ S SS+ + ++ SS L + S+AP + S+G + SP +PL
Sbjct: 909 MNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPL 968
Query: 627 PSQTPG-HSLTPPPSLSSHGSSSSLHLG 653
P + G TP P S SSSS G
Sbjct: 969 PLKADGKEEGTPQPESKSKKSSSSTTTG 996
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 48.5 bits (114), Expect = 3e-05
Identities = 133/594 (22%), Positives = 204/594 (34%), Gaps = 113/594 (19%)
Query: 159 RGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPNTNPSEGLGPLPNP------------ 206
+ L + DA TP Q S T + P + P+ L P NP
Sbjct: 133 QALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQTPP 192
Query: 207 -------TANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG--NQVPMDSSGAT--VGL 255
+A E S P+T NL + +GL Q PG DS+ T +GL
Sbjct: 193 SLPPCPESAGAATTEALSPPKTPNL--LPPLGLS--QSGPPGLLPSPSFDSNPPTTLLGL 248
Query: 256 FDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVF-------SAGLAPAAFV 308
S T+Q T + Q + A + P + +F S+ APAA
Sbjct: 249 IPAPSMVPATDTKAPPTLQAETTTKPQATS-APSPAPKQSFLFGTQNTSPSSPAAPAASS 307
Query: 309 PNPYI--ISAAPPGTDPY--TAAGLAAAATLAGPAVVP-------PQY------YGVPWG 351
+P I APP ++ T G + +AT + +P P + G P
Sbjct: 308 ASPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPAS 367
Query: 352 V-YPANLFQQQAAAA-------------ANNTASQQAASQAQPGQQQVLRAGAGQRPLTP 397
V PA F+Q A A+ T++ + A P + G
Sbjct: 368 VPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFG---FGI 424
Query: 398 NQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGL 457
N + + + A AA+ FG AP A + G+
Sbjct: 425 NSVSSSSVSTTTSTATAASQPFLFG-------------APQA---SAASFTPAMGSIFQF 468
Query: 458 GAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTN 517
G P L T V S + A A +A+ +G + L T P Q T
Sbjct: 469 GKPPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTL----ATSAPATSSQPTLT- 523
Query: 518 LQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSV--- 574
SN+ + ++ S + S PG + G G GAA + FGSS
Sbjct: 524 -FSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFG 582
Query: 575 GSSASSSATRRESLSTSSDLYKRSSSSLAP-IGQPFYNSLGFSSSPSPIGMPLPSQTPGH 633
S+A ++A S + + + P G +++ G ++ S G P SQ
Sbjct: 583 NSAAPAAAPTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQ---- 638
Query: 634 SLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
+ G S+++ G SG GA + S+ S+SS+F S++
Sbjct: 639 --------PAFGGSTAVFSFGAATSSGF------GATTQTASSGSSSSVFGSTT 678
Score = 48.5 bits (114), Expect = 3e-05
Identities = 98/400 (24%), Positives = 144/400 (36%), Gaps = 61/400 (15%)
Query: 272 TVQQLTAAQQQ-----QYALAAAQQPHIAGVFSAGLAPAAFVPNPYIIS--------AAP 318
T TAA Q A AA+ P + +F G PA +P ++ A P
Sbjct: 435 TTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPA--LPTTTTVTTFSQSLPTAVP 492
Query: 319 PGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQA 378
T A +TLA A + + F ++A + +
Sbjct: 493 TATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANP 552
Query: 379 QP--GQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLA 436
QP G + GA + LTP+ G S A AAA P + +P +
Sbjct: 553 QPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAAAPTPA---PPSMIKIVPAH---V 606
Query: 437 PTAYYDQTGALVVGP----GARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG----TA 488
PT G + GAP + P S A + AA + G T
Sbjct: 607 PTPIQPTFGGATHSAFGLKATASAFGAPA---SSQPAFGGSTAVFSFGAATSSGFGATTQ 663
Query: 489 SSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGS 548
++ +GS++ +F T P + S SF + + SS ++ FS G GQ GS
Sbjct: 664 TASSGSSSSVFG--STTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGS 721
Query: 549 TSLGFGSGNSLGA-AIGSA--LSGFGSSVGSSASS------SATRRESLSTSSDLYKRSS 599
T+ LG A+G+ + F +VGS+ S +AT L+T + S
Sbjct: 722 TATSTPFAGGLGQNALGTTGQSTPFAFNVGSTTESKPVFGGTATPTFGLNTPAPGVGTSG 781
Query: 600 SSLAPIGQPFYNSLGFSSSP-------SPIGMPLPSQTPG 632
SSL S G SS+P +P G PS + G
Sbjct: 782 SSL---------SFGASSAPAQGFVGVAPFGSAAPSFSIG 812
Score = 42.7 bits (99), Expect = 0.002
Identities = 112/492 (22%), Positives = 165/492 (33%), Gaps = 100/492 (20%)
Query: 292 PHIAGVFSAGLAPAAF-VPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP-----PQY 345
P VFS+ PA+ +P P+ P T P T A L A AV P P
Sbjct: 353 PTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPST 412
Query: 346 YGVPWGVYPANLFQQQAAAAANNTASQQAASQAQP-GQQQVLRAGA----------GQRP 394
+ + +++ + T++ AASQ G Q A G+ P
Sbjct: 413 DSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPP 472
Query: 395 LTPNQGQQGQQAESL------AAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALV 448
P ++SL A +++A FG LAT P PT + T
Sbjct: 473 ALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSS-QPTLTFSNTST-- 529
Query: 449 VGPGARTGLGAPVRLMAPT-PVLISSAAAQAAAAAAAGGTASSLTGSTNGLFR------P 501
P G+ + P+ P A AA G +LT S F P
Sbjct: 530 --PTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAP 587
Query: 502 IGTQ---PPQQQQQQPS---TNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGS 555
PP + P+ T +Q + S ++S F G P S+ FG
Sbjct: 588 AAAPTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATASAF----GAPASSQPAFGG 643
Query: 556 GN---SLGAAI-------------GSALSGFGSSV---------------GSSASSSATR 584
S GAA GS+ S FGS+ GS + AT
Sbjct: 644 STAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATP 703
Query: 585 RESLSTSSDLYKRSSSSLAPIGQPF-----YNSLGFSSSPSPIGMPLPSQTPGHSL---- 635
S +T + + S PF N+LG + +P + S T +
Sbjct: 704 GSSATTGAFSFGAGQSGSTATSTPFAGGLGQNALGTTGQSTPFAFNVGSTTESKPVFGGT 763
Query: 636 --------TPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
TP P + + G SSL G + + ++ AP + SA+ + S+ + S
Sbjct: 764 ATPTFGLNTPAPGVGTSG--SSLSFGASSAPAQGFVGVAP-----FGSAAPSFSIGAGSK 816
Query: 688 QLFPPSRLRYNR 699
L RL+ R
Sbjct: 817 TLGARQRLQARR 828
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 48.1 bits (113), Expect = 4e-05
Identities = 92/366 (25%), Positives = 124/366 (33%), Gaps = 68/366 (18%)
Query: 243 QVPMDSSGATVGLFDYNSQQQLFQRT------NALTVQQLTAAQQ--------QQYALAA 288
Q P + A L D+ + FQR LTV AAQQ + A+ A
Sbjct: 23 QNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVVSRVAAQQGFDLDLGYRLLAVCA 82
Query: 289 AQQ----PHIAGVFSAG---LAPAAFVPNPYIISAAPPGT---DPYTAAGLAAAATLAGP 338
A + P A + S+ L + + + PPG P ++ + TL+
Sbjct: 83 ANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTLSHS 142
Query: 339 AVVPPQYYGVPW----GVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRP 394
P Y VPW P +L NT+ Q + G
Sbjct: 143 DGSFP-YDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMA 201
Query: 395 ---LTPNQGQQ-----GQQAESLAAAAAANPTLA---FGQGLATGMPGYQVLAPTAYYDQ 443
T N G GQQ + A A A P + +G+ G G+ P
Sbjct: 202 SGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPG----- 256
Query: 444 TGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIG 503
GP A G+G P P +AAA AAA AAA TA++ +T
Sbjct: 257 ------GPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAAL---- 306
Query: 504 TQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAI 563
Q+ Q N YG T + S F + PG G S+G GS N A
Sbjct: 307 -----QETQNKDINQ-----YGPMGPTQAYNSQ--FMNQPGPRGPASMG-GSMNPASMAA 353
Query: 564 GSALSG 569
G SG
Sbjct: 354 GMTPSG 359
Score = 32.3 bits (72), Expect = 2.4
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
Query: 488 ASSLTGSTNGLFRP--IGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQ 545
AS +T S GL P G Q + P+ S YG + S + + GP
Sbjct: 201 ASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNA 260
Query: 546 PGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPI 605
P + + +A + + ++A+++AT +++ + + + P+
Sbjct: 261 PAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPM 320
Query: 606 GQPFYNSLGFSSSPSPIG 623
G + F + P P G
Sbjct: 321 GPTQAYNSQFMNQPGPRG 338
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 48.1 bits (113), Expect = 4e-05
Identities = 133/596 (22%), Positives = 206/596 (34%), Gaps = 115/596 (19%)
Query: 159 RGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPNTNPSEGLGPLPNP------------ 206
+ L + DA TP + Q S T + + P+ L P NP
Sbjct: 284 QALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESLKKMQTPP 343
Query: 207 -------TANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPG--NQVPMDSSGAT--VGL 255
+A E S P+T +L + +GL Q PG DS T +GL
Sbjct: 344 SLPPCPESAGAATTEALSPPKTPSL--LPPLGLS--QSGPPGLLPSPSFDSKPPTTLLGL 399
Query: 256 FDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVF-------SAGLAPAAFV 308
S T+Q TA + Q + A + P + +F S+ APAA
Sbjct: 400 IPAPSMVPATDTKAPPTLQAETATKPQATS-APSPAPKQSFLFGTQNTSPSSPAAPAASS 458
Query: 309 PNPYI--ISAAPPGTDPY--TAAGLAAAATLAGPAVVP-------PQY------YGVPWG 351
+P I APP ++ T G + AT + +P P + G P
Sbjct: 459 ASPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPAS 518
Query: 352 V-YPANLFQQQAAAA-------------ANNTASQQAASQAQPGQQQVLRAGAGQRPLTP 397
V PA F+Q A A+ T++ + A P + G
Sbjct: 519 VPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFG---FGI 575
Query: 398 NQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGL 457
N + + + A AA+ FG AP A + G+
Sbjct: 576 NSVSSSSVSTTTSTATAASQPFLFG-------------APQA---SAASFTPAMGSIFQF 619
Query: 458 GAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTN 517
G P L T V S + A A +A+ +G + L T P Q T
Sbjct: 620 GKPPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTL----ATSAPATSSQPTLT- 674
Query: 518 LQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSS--VG 575
SN+ + ++ S + S PG + G G GAA + FGSS G
Sbjct: 675 -FSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFG 733
Query: 576 SSASSSATRRESLSTSSDLYKRSSSSLAPIGQPF----YNSLGFSSSPSPIGMPLPSQTP 631
+SA+ + + + +S + + PI F +++ G ++ S G P SQ
Sbjct: 734 NSAAPAPATAPTPAPASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQ-- 791
Query: 632 GHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSS 687
+ G S+++ G SG GA + S+ S+SS+F S++
Sbjct: 792 ----------PAFGGSTAVFSFGAATSSGF------GATTQTASSGSSSSVFGSTT 831
Score = 47.4 bits (111), Expect = 7e-05
Identities = 96/402 (23%), Positives = 142/402 (35%), Gaps = 51/402 (12%)
Query: 272 TVQQLTAAQQQ-----QYALAAAQQPHIAGVFSAGLAPAAFVPNPYIIS--------AAP 318
T TAA Q A AA+ P + +F G PA +P ++ A P
Sbjct: 586 TTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPA--LPTTTTVTTFSQSLPTAVP 643
Query: 319 PGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQA 378
T A +TLA A + + F ++A + +
Sbjct: 644 TATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANP 703
Query: 379 QP--GQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLA 436
QP G + GA + LTP+ G S A A A PT A +
Sbjct: 704 QPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAPATAPTPAPASTIKIVPAHVPTPI 763
Query: 437 PTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGG----TASSLT 492
+ T + + GAP + P S A + AA + G T ++ +
Sbjct: 764 QPTFGGATHSAFGLKATASAFGAPA---SSQPAFGGSTAVFSFGAATSSGFGATTQTASS 820
Query: 493 GSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLG 552
GS++ +F T P + S SF + + SS ++ FS G GQ GST+
Sbjct: 821 GSSSSVFG--STTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATS 878
Query: 553 FGSGNSLGA-AIGSA--LSGFGSSVGSSASS------SATRRESLSTSSDLYKRSSSSLA 603
LG A+G+ + F +VGS+ S +AT +T + S SSL
Sbjct: 879 TPFTGGLGQNALGTTGQSTPFAFNVGSTTESKPVFGGTATPTFGQNTPAPGVGTSGSSL- 937
Query: 604 PIGQPFYNSLGFSSSPS-------PIGMPLPSQTPGHSLTPP 638
S G SS+P+ P G PS + G P
Sbjct: 938 --------SFGASSAPAQGFVGVGPFGSAAPSFSIGAGSKTP 971
Score = 38.9 bits (89), Expect = 0.026
Identities = 87/393 (22%), Positives = 139/393 (35%), Gaps = 57/393 (14%)
Query: 292 PHIAGVFSAGLAPAAF-VPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP-----PQY 345
P VFS+ PA+ +P P+ P T P T A L A AV P P
Sbjct: 504 PTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPST 563
Query: 346 YGVPWGVYPANLFQQQAAAAANNTASQQAASQAQP-GQQQVLRAGA----------GQRP 394
+ + +++ + T++ AASQ G Q A G+ P
Sbjct: 564 DSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPP 623
Query: 395 LTPNQGQQGQQAESL------AAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALV 448
P ++SL A +++A FG LAT P PT + T
Sbjct: 624 ALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSS-QPTLTFSNTST-- 680
Query: 449 VGPGARTGLGAPVRLMAPT-PVLISSAAAQAAAAAAAGGTASSLTGSTNGLF---RPIGT 504
P G+ + P+ P A AA G +LT S F
Sbjct: 681 --PTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAP 738
Query: 505 QPPQQQQQQPSTNLQSNSFYGSSSL-------TNSSQSSSLFSHGPGQPGSTSLGFGSGN 557
P P++ ++ + + + T+S+ + G P S+ FG
Sbjct: 739 APATAPTPAPASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQPAFGGST 798
Query: 558 SLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSS 617
++ + + SGFG++ +++S S SS ++ ++ S PF + G S+
Sbjct: 799 AVFSFGAATSSGFGATTQTASSGS---------SSSVFGSTTPS------PF--TFGGSA 841
Query: 618 SPSPIG-MPLPSQTPGHSLTPPPSLSSHGSSSS 649
+P+ G + TPG S T G S S
Sbjct: 842 APAGSGSFGINVATPGSSATTGAFSFGAGQSGS 874
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 48.1 bits (113), Expect = 4e-05
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 20/188 (10%)
Query: 466 PTPVLISSAAAQAAAAAAAGGTASSLTGS-TNGLFRP-IGTQPPQQQQQQPSTNLQSNSF 523
P P++ A++ G ++SS G + G+ RP + + P ++Q S++ S
Sbjct: 353 PGPMVTPHNKAKSPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRRQNGSSSSGPERSI 412
Query: 524 YGSSSLTNSSQSSSLF---SHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASS 580
GS TN S S + GPGQP S+S G G + ++ SA GSS G
Sbjct: 413 SGSKKPTNDSNPSRRTVSGTCGPGQPASSS--GGPGRPISGSVSSA-RPLGSSRGPGRPV 469
Query: 581 SATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGH---SLTP 637
S+ +R S L P G+ S P G + + PG SL P
Sbjct: 470 SSPHE---------LRRPVSGLGPPGRSVSGPGRSISGSIPAGRTVSNSVPGRPVSSLGP 520
Query: 638 PPSLSSHG 645
++SS G
Sbjct: 521 GQTVSSSG 528
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 47.4 bits (111), Expect = 7e-05
Identities = 108/421 (25%), Positives = 153/421 (36%), Gaps = 97/421 (23%)
Query: 318 PPGTDPYTAAGLAA----AATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQ 373
PPG Y A G A A + P VP VP V + Q A +A+ AS
Sbjct: 14 PPGA--YEAGGPGAFMHGAGAASSPVYVPTPR--VPSSVLGLSYLQGGGAGSASGGASGG 69
Query: 374 ----AASQAQPGQQQ----VLRAGAGQRPLTPN--------QGQQGQQAESLAAAAAANP 417
AAS A PG QQ +AGA TP G G A + AAAAAA
Sbjct: 70 SSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLA-AAAAAAAARE 128
Query: 418 TLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQ 477
A+ G G A A +Q G R G P + A+
Sbjct: 129 AAAYSSG------GGAAGAGLAGREQYG--------RAGFAGSYSSPYPAYMADVGASWA 174
Query: 478 AAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSS 537
AAAAA+AG S + S G P + P+ ++ + G + + S+
Sbjct: 175 AAAAASAGPFDSPVLHSLPGRANPAA--------RHPNLDMFDDFSEGRECVNCGAMSTP 226
Query: 538 LFSHGPGQPGSTSLGFGSGNSLGAAIG--SALSGFGSS-VGSSASSSATRRESLS----- 589
L+ G+G+ L A G ++G + SA+RR LS
Sbjct: 227 LWRRD-----------GTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQ 275
Query: 590 -TSSDLYKRSSSSLAPIGQPFYNSLG----FSSSPSPIGM------------------PL 626
T++ L++R++ G+P N+ G P P+ M
Sbjct: 276 TTTTTLWRRNAE-----GEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKT 330
Query: 627 PSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSS 686
P+ G PP +S SS+S + ++ R I PG + Y +SS S FS S
Sbjct: 331 PAAPSGSESLPP---ASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVS 387
Query: 687 S 687
+
Sbjct: 388 A 388
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 47.0 bits (110), Expect = 1e-04
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 507 PQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSA 566
P Q S+ S+S GS S + S SSS + G+ S+ S + L +++ S+
Sbjct: 1077 PSSHSQYTSSGSVSSS--GSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSS 1134
Query: 567 LSGFGSSVGSSAS-------SSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSP 619
GSS ++S SS + LS+ S SS+ + P G+P +SL S
Sbjct: 1135 QGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGS-----SSTKMKPQGKP--SSLMNPSLS 1187
Query: 620 SPIGMPLPSQTPGHS-----------LTPPPSLS----SHGSSSSLHLGGLTNGSGRYIS 664
P P S+ PG S TPP S + S GS S H+ G ++ SG S
Sbjct: 1188 KPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS-HMSGTSSSSGMKSS 1246
Query: 665 AAPGAEAKY--------RSASSTSSLFSSSSQLFPPSRLRYNRS 700
+ G+ S +++SS FSSS S+ ++ S
Sbjct: 1247 SGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSS 1290
Score = 39.7 bits (91), Expect = 0.015
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 451 PGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGL--FRPIGTQPPQ 508
PG L +P M P P S+ A++ ++ +GG+ S T S++G+ +G+
Sbjct: 1199 PGGSDKLASP---MKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSL 1255
Query: 509 QQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALS 568
Q+ PS+N + S S + SS SSS HG + S S SL A I
Sbjct: 1256 SQKTPPSSN-SCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSR--NKKPSLTAVIDKLKH 1312
Query: 569 GFGSSVGSSASSSATRRESLSTSSDLYKRSS 599
G +S G + +ST+S + SS
Sbjct: 1313 GVVTS-GPGGEDPLDGQMGVSTNSSSHPMSS 1342
Score = 34.7 bits (78), Expect = 0.49
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 547 GSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 606
G+ +G S +S + GS +S GS S SSS++ S S K SS + +
Sbjct: 1070 GTVMVGKPSSHSQYTSSGS-VSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLS 1128
Query: 607 QPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSL 650
Y+S G S S PG S LSS SS+ +
Sbjct: 1129 SSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKM 1172
>gi|89276766 trophinin isoform 5 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 2e-04
Identities = 53/173 (30%), Positives = 71/173 (41%), Gaps = 18/173 (10%)
Query: 520 SNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALS---GFGSSVGS 576
S SF G+ S + + + + G G STS GFG S A G S GFG++ +
Sbjct: 1076 SASFSGAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPST 1135
Query: 577 SASSSATRRESL------STSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQT 630
S S SL STS S+++L G P S FS + SP PS +
Sbjct: 1136 SVSFGGAHGTSLCFGGAPSTSLCFGSASNTNLC-FGGPPSTSACFSGATSPSFCDGPSTS 1194
Query: 631 PGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLF 683
G S +G S++ GG N S + G A + STSS F
Sbjct: 1195 TGFSF-------GNGLSTNAGFGGGLNTSAGF-GGGLGTSAGFSGGLSTSSGF 1239
Score = 45.1 bits (105), Expect = 4e-04
Identities = 55/191 (28%), Positives = 72/191 (37%), Gaps = 35/191 (18%)
Query: 526 SSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSAL-------------SGFGS 572
SS +S+ F GPG TS GFG G A L GFG
Sbjct: 1236 SSGFDGGLGTSAGFGGGPG----TSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGG 1291
Query: 573 SVGSSASSSATRRES------LSTSSDL-------YKRSSSSLAPIGQPFYNSLGFSSSP 619
+G++AS +T S LSTS + R S++ G S GF+ P
Sbjct: 1292 GLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEP 1351
Query: 620 S-PIGMPL-PSQTPGHSLTPPPSLS-SHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSA 676
S G PS G S P + G S+S GG + G+G P A +
Sbjct: 1352 STSTGFSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPSTGAG--FGGGPNTGAGFGGG 1409
Query: 677 SSTSSLFSSSS 687
STS+ F S +
Sbjct: 1410 PSTSAGFGSGA 1420
Score = 44.7 bits (104), Expect = 5e-04
Identities = 66/262 (25%), Positives = 102/262 (38%), Gaps = 40/262 (15%)
Query: 452 GARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTN--GLFRP---IGTQP 506
GA +G G + A ++S++ + +A + +S+L+ ST G+ G P
Sbjct: 844 GASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFGGSP 903
Query: 507 PQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSA 566
S SF G+ S + S S G G STS+ FG +S A G
Sbjct: 904 SS-----------SGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSSTSANFGGT 952
Query: 567 LS-------------GFGSSVGSSASSSATRRES------LSTSSDLYKRSSSSLAPIGQ 607
LS GFG ++ +SAS + S +STS+D S+S+ G
Sbjct: 953 LSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGFGGAMSTSADFGGTLSTSVCFGGS 1012
Query: 608 PFYNSLGFSS---SPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYIS 664
P S+ F S + + G + + T S+S GG N + +
Sbjct: 1013 P-GTSVSFGSALNTNAGYGGAVSTNTDFGGTLSTSVCFGGSPSTSAGFGGALNTNASF-G 1070
Query: 665 AAPGAEAKYRSASSTSSLFSSS 686
A A + A STS+ FS +
Sbjct: 1071 CAVSTSASFSGAVSTSACFSGA 1092
Score = 43.9 bits (102), Expect = 8e-04
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 13/182 (7%)
Query: 518 LQSNSFYGSSSLTNSSQSSSLFSH-GPGQPGSTSLGFGSGNSLGAAIG---SALSGFGSS 573
L ++ +G S T+ S S+L ++ G G ST+ FG S G S +GFG +
Sbjct: 1003 LSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLSTSVCFGGSPSTSAGFGGA 1062
Query: 574 VGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQP-----FYNSLGFSSSPSPIG--MPL 626
+ ++AS S S S + + S API P F S GF + S
Sbjct: 1063 LNTNASFGCAVSTSASFSGAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGT 1122
Query: 627 PSQTPGHSLTPPPSLSSHGS-SSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSS 685
PS + G P S+S G+ +SL GG + S + SA+ + STS+ FS
Sbjct: 1123 PSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSLCFGSAS-NTNLCFGGPPSTSACFSG 1181
Query: 686 SS 687
++
Sbjct: 1182 AT 1183
Score = 43.5 bits (101), Expect = 0.001
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 509 QQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALS 568
Q+ STN+ N G+S+ S +S+ +G S+S GF G G G A S
Sbjct: 712 QENADASTNV--NFSRGASTRAGFSDGASISFNGAP---SSSGGFSGGP--GITFGVAPS 764
Query: 569 GFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPS 628
+S S ++S + +LSTSS SS++ G S FSS S +P
Sbjct: 765 ---TSASFSNTASISFGGTLSTSSSF---SSAASISFGCAHSTSTSFSSEASISFGGMPC 818
Query: 629 QTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPG------AEAKYRSASSTSSL 682
+ S S S S+S+ GG ++G G +S G + SA +TS++
Sbjct: 819 TSASFSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTV 878
Query: 683 FSSS 686
FSS+
Sbjct: 879 FSSA 882
Score = 38.9 bits (89), Expect = 0.026
Identities = 54/197 (27%), Positives = 70/197 (35%), Gaps = 22/197 (11%)
Query: 395 LTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGAR 454
L+ + G G S + FG GL T L +A + G LV G
Sbjct: 1233 LSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFG--GGLVTSDGFG 1290
Query: 455 TGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQ-- 512
GLG + L +SA + + G + GL IG
Sbjct: 1291 GGLGTNASFGS---TLGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGF 1347
Query: 513 --QPSTNLQSNSFYGSSSLTNSSQSSSL---FSHGPGQPG-----STSLGFGSGNSLGAA 562
+PST+ +S G SS+ S S F GP G ST GFG G + GA
Sbjct: 1348 TGEPSTSTGFSS--GPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPSTGAGFGGGPNTGAG 1405
Query: 563 IG---SALSGFGSSVGS 576
G S +GFGS S
Sbjct: 1406 FGGGPSTSAGFGSGAAS 1422
Score = 31.2 bits (69), Expect = 5.4
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 612 SLGFSSSPSPIGMPLPSQTPGHSLTPPPSLS-SHGSSSSLHLGGLTNGSGRYISAAPGAE 670
S+ F+ +PS G S PG + PS S S +++S+ GG + S + SA A
Sbjct: 738 SISFNGAPSSSGGF--SGGPGITFGVAPSTSASFSNTASISFGGTLSTSSSFSSA---AS 792
Query: 671 AKYRSASSTSSLFSSSSQL 689
+ A STS+ FSS + +
Sbjct: 793 ISFGCAHSTSTSFSSEASI 811
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 46.2 bits (108), Expect = 2e-04
Identities = 72/248 (29%), Positives = 94/248 (37%), Gaps = 38/248 (15%)
Query: 261 QQQLFQR--TNALTVQQLTAAQQQQYAL--AAAQQPHIAGVFSAGLAPAAFVPNPYIISA 316
QQ L ++ T A +QQ+ AAQQQ L AA QQ H++ SA L A V ++S
Sbjct: 61 QQALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLS---SAQLQSLAAVQQASLVSN 117
Query: 317 APPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAAS 376
T + + ++A A P Q + PA AA N S +A+
Sbjct: 118 RQGST---SGSNVSAQA--------PAQSSSINLAASPA------AAQLLNRAQSVNSAA 160
Query: 377 QAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESL-----AAAAAANPTLAFGQGLATGMPG 431
+ QQ VL LT +Q Q +A+ L A A P L G P
Sbjct: 161 ASGIAQQAVLLGNTSSPALTASQAQMYLRAQMLIFTPTATVATVQPELGTGSPARPPTPA 220
Query: 432 YQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTP--------VLISSAAAQAAAAAA 483
QV T QT A T P + PTP S AQA+ A A
Sbjct: 221 -QVQNLTLRTQQTPAAAASGPTPTQPVLPSLALKPTPGGSQPLPTPAQSRNTAQASPAGA 279
Query: 484 AGGTASSL 491
G A S+
Sbjct: 280 KPGIADSV 287
Score = 30.4 bits (67), Expect = 9.3
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 24/257 (9%)
Query: 471 ISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLT 530
+SSA Q+ AA S+ GST+G + Q P Q S NL ++ ++ L
Sbjct: 98 LSSAQLQSLAAVQQASLVSNRQGSTSG--SNVSAQAPAQSS---SINLAASP--AAAQLL 150
Query: 531 NSSQS-SSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLS 589
N +QS +S + G Q + LG S +L A+ + + ++ AT + L
Sbjct: 151 NRAQSVNSAAASGIAQQ-AVLLGNTSSPALTASQAQMYLRAQMLIFTPTATVATVQPELG 209
Query: 590 TSSDLYKRSSSSLAPIG-QPFYNSLGFSSSPSPIGMPLPS----QTPGHSLTPPPSLSSH 644
T S + + + + + +S P+P LPS TPG S P S
Sbjct: 210 TGSPARPPTPAQVQNLTLRTQQTPAAAASGPTPTQPVLPSLALKPTPGGSQPLPTPAQSR 269
Query: 645 GSSSSLHLG---GLTNG------SGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRL 695
++ + G G+ + G S+ PG+ + R+ S + ++ L P+
Sbjct: 270 NTAQASPAGAKPGIADSVMEPHKKGDGNSSVPGS-MEGRAGLSRTVPAVAAHPLIAPAYA 328
Query: 696 RYNRSDIMPSGRSRLLE 712
+ ++P S+ L+
Sbjct: 329 QLQPHQLLPQPSSKHLQ 345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,858,291
Number of Sequences: 37866
Number of extensions: 2254436
Number of successful extensions: 13948
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 548
Number of HSP's that attempted gapping in prelim test: 10240
Number of HSP's gapped (non-prelim): 2800
length of query: 1064
length of database: 18,247,518
effective HSP length: 113
effective length of query: 951
effective length of database: 13,968,660
effective search space: 13284195660
effective search space used: 13284195660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.