Guide to the Human Genome
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Name: SNAP91 Sequence: fasta or formatted (907aa) NCBI GI: 7662228
Description:

synaptosomal-associated protein, 91kDa homolog

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.0        145           6
 C cysteine            0.4          4           1
 D aspartate           5.3         48           1
 E glutamate           3.7         34           1
 F phenylalanine       4.5         41           2
 G glycine             6.6         60           2
 H histidine           0.9          8           2
 I isoleucine          2.3         21           1
 K lysine              4.2         38           3
 L leucine             7.7         70           2
 M methionine          2.9         26           2
 N asparagine          2.9         26           2
 P proline            11.4        103           4
 Q glutamine           3.2         29           2
 R arginine            1.7         15           2
 S serine             10.7         97           5
 T threonine           8.6         78           6
 V valine              5.5         50           3
 W tryptophan          0.6          5           1
 Y tyrosine            1.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptosomal-associated protein, 91kDa homolog 
PICALM                0.275   phosphatidylinositol-binding clathrin assembly prote...
PICALM                0.272   phosphatidylinositol-binding clathrin assembly prote...
NACA                  0.052   nascent polypeptide-associated complex alpha subuni...
NUP214                0.042   nucleoporin 214kDa 
MUC17                 0.042   mucin 17 
POM121C               0.041   POM121 membrane glycoprotein (rat)-like 
FLJ22184              0.039   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.038   PREDICTED: hypothetical protein FLJ22184 
LOC100288540          0.038   PREDICTED: hypothetical protein XP_002342775 
SRCAP                 0.038   Snf2-related CBP activator protein 
POM121                0.038   nuclear pore membrane protein 121 
FLJ22184              0.038   PREDICTED: hypothetical protein LOC80164 
MUC2                  0.037   mucin 2 precursor 
KIAA0754              0.034   hypothetical protein LOC643314 
MUC5B                 0.033   mucin 5, subtype B, tracheobronchial 
LOC100294420          0.032   PREDICTED: similar to mucin 2 
RAPH1                 0.032   Ras association and pleckstrin homology domains 1 is...
PRG4                  0.032   proteoglycan 4 isoform D 
PRG4                  0.032   proteoglycan 4 isoform C 
PRG4                  0.032   proteoglycan 4 isoform B 
PRG4                  0.032   proteoglycan 4 isoform A 
GLTSCR1               0.032   glioma tumor suppressor candidate region gene 1 [Ho...
MUC12                 0.031   PREDICTED: mucin 12 
MUC5AC                0.029   mucin 5AC 
TAF4                  0.028   TBP-associated factor 4 
MUC4                  0.028   mucin 4 isoform a 
KIAA1522              0.028   hypothetical protein LOC57648 
LOC100133756          0.028   PREDICTED: hypothetical protein, partial 
MBD6                  0.027   methyl-CpG binding domain protein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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