POP4 33379

Name: POP4	Sequence: fasta or formatted (220aa)		NCBI GI: 5729986
Description: processing of precursor 4		Referenced in: RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 15 1 C cysteine 1.4 3 1 D aspartate 4.5 10 1 E glutamate 5.5 12 1 F phenylalanine 4.5 10 1 G glycine 4.1 9 1 H histidine 2.3 5 1 I isoleucine 6.8 15 2 K lysine 12.7 28 4 L leucine 10.0 22 2 M methionine 1.4 3 1 N asparagine 0.9 2 1 P proline 4.1 9 1 Q glutamine 6.8 15 2 R arginine 7.7 17 2 S serine 7.7 17 2 T threonine 4.5 10 1 V valine 4.5 10 2 W tryptophan 0.5 1 1 Y tyrosine 3.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 processing of precursor 4 COMMD5 0.020 COMM domain containing 5 COMMD5 0.020 COMM domain containing 5 COMMD5 0.020 COMM domain containing 5 FBXL5 0.020 F-box and leucine-rich repeat protein 5 isoform 1 [H... TAOK2 0.017 TAO kinase 2 isoform 1 TAOK2 0.017 TAO kinase 2 isoform 2 BRCA2 0.012 breast cancer 2, early onset MAGI1 0.012 membrane associated guanylate kinase, WW and PDZ dom... SIDT2 0.012 SID1 transmembrane family, member 2 TCHH 0.012 trichohyalin FAM186A 0.010 family with sequence similarity 186, member A [Homo... EZR 0.010 ezrin EZR 0.010 ezrin CCDC52 0.010 coiled-coil domain containing 52 C22orf42 0.010 chromosome 22 open reading frame 42 BAZ1A 0.010 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.010 bromodomain adjacent to zinc finger domain, 1A isofo... RIN2 0.010 Ras and Rab interactor 2 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 7 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 6 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 5 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 4 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 3 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 2 TNIK 0.007 TRAF2 and NCK interacting kinase isoform 1 TBC1D24 0.007 TBC1 domain family, member 24 UPF3A 0.007 UPF3 regulator of nonsense transcripts homolog A iso... UPF3A 0.007 UPF3 regulator of nonsense transcripts homolog A iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.