Guide to the Human Genome
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Name: TBC1D24 Sequence: fasta or formatted (553aa) NCBI GI: 89886453
Description:

TBC1 domain family, member 24

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         46           2
 C cysteine            3.6         20           1
 D aspartate           5.4         30           1
 E glutamate           6.0         33           1
 F phenylalanine       6.1         34           2
 G glycine             5.8         32           5
 H histidine           2.4         13           1
 I isoleucine          4.2         23           1
 K lysine              5.6         31           1
 L leucine            11.0         61           3
 M methionine          1.6          9           1
 N asparagine          2.5         14           2
 P proline             5.2         29           3
 Q glutamine           5.2         29           1
 R arginine            5.6         31           2
 S serine              6.7         37           3
 T threonine           3.4         19           2
 V valine              6.9         38           2
 W tryptophan          1.4          8           1
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 24 
OXR1                  0.047   oxidation resistance 1 isoform 2 
OXR1                  0.047   oxidation resistance 1 isoform 1 
C20orf118             0.046   hypothetical protein LOC140711 
NCOA7                 0.040   nuclear receptor coactivator 7 isoform 2 
NCOA7                 0.040   nuclear receptor coactivator 7 isoform 1 
TBC1D2B               0.023   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.023   TBC1 domain family, member 2B isoform b 
TBC1D10A              0.022   TBC1 domain family, member 10A 
TBC1D10B              0.020   TBC1 domain family, member 10B 
TBC1D9                0.020   TBC1 domain family, member 9 (with GRAM domain) [Ho...
EVI5L                 0.017   ecotropic viral integration site 5-like isoform 2 [H...
KIAA1609              0.017   hypothetical protein LOC57707 
TBC1D10C              0.017   TBC1 domain family, member 10C 
TBC1D4                0.016   TBC1 domain family, member 4 
RABGAP1               0.015   RAB GTPase activating protein 1 
EVI5                  0.015   ecotropic viral integration site 5 
TBC1D12               0.014   TBC1 domain family, member 12 
EVI5L                 0.014   ecotropic viral integration site 5-like isoform 1 [...
SGSM3                 0.014   small G protein signaling modulator 3 
TBC1D14               0.014   TBC1 domain family, member 14 isoform b 
TBC1D14               0.014   TBC1 domain family, member 14 isoform a 
TBC1D14               0.014   TBC1 domain family, member 14 isoform a 
TBC1D8                0.014   TBC1 domain family, member 8 
TBC1D1                0.013   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
RABGAP1L              0.013   RAB GTPase activating protein 1-like isoform A [Homo...
TBC1D8B               0.011   TBC1 domain family, member 8B (with GRAM domain) iso...
GRTP1                 0.011   growth hormone regulated TBC protein 1 
TBC1D2                0.006   TBC1 domain family, member 2 
CRIM1                 0.006   cysteine-rich motor neuron 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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