Guide to the Human Genome
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Name: TNIK Sequence: fasta or formatted (1331aa) NCBI GI: 239735582
Description:

TRAF2 and NCK interacting kinase isoform 3

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1352aa] TRAF2 and NCK interacting kinase isoform 2
alt prot [1323aa] TRAF2 and NCK interacting kinase isoform 4
alt prot [1305aa] TRAF2 and NCK interacting kinase isoform 5
alt prot [1297aa] TRAF2 and NCK interacting kinase isoform 6
alt prot [1276aa] TRAF2 and NCK interacting kinase isoform 7
alt prot [1268aa] TRAF2 and NCK interacting kinase isoform 8
alt prot [1360aa] TRAF2 and NCK interacting kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         70           3
 C cysteine            0.7          9           1
 D aspartate           4.5         60           2
 E glutamate          10.0        133           6
 F phenylalanine       2.5         33           2
 G glycine             6.2         82           2
 H histidine           3.0         40           2
 I isoleucine          4.9         65           1
 K lysine              6.3         84           3
 L leucine             7.9        105           2
 M methionine          2.3         31           2
 N asparagine          4.1         54           1
 P proline             6.0         80           2
 Q glutamine           5.6         74           3
 R arginine            7.9        105           3
 S serine              9.1        121           6
 T threonine           4.7         63           2
 V valine              5.6         74           2
 W tryptophan          1.1         14           1
 Y tyrosine            2.6         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.994   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.991   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.985   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.940   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.934   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.931   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.925   TRAF2 and NCK interacting kinase isoform 6 
MINK1                 0.627   misshapen/NIK-related kinase isoform 2 
MINK1                 0.620   misshapen/NIK-related kinase isoform 1 
MINK1                 0.615   misshapen/NIK-related kinase isoform 3 
MINK1                 0.612   misshapen/NIK-related kinase isoform 4 
MAP4K4                0.607   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.579   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.539   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.145   Nik related kinase 
MYO3A                 0.106   myosin IIIA 
MYO3B                 0.102   myosin IIIB isoform 1 
MYO3B                 0.102   myosin IIIB isoform 2 
STK4                  0.094   serine/threonine kinase 4 
MAP4K3                0.091   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.090   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.090   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.089   serine/threonine kinase 3 
STK25                 0.089   serine/threonine kinase 25 
MST4                  0.089   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.086   serine/threonine kinase 24 isoform b 
STK24                 0.086   serine/threonine kinase 24 isoform a 
MAP4K2                0.085   mitogen-activated protein kinase kinase kinase kinas...
MAP4K1                0.083   mitogen-activated protein kinase kinase kinase kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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