Search of human proteins with 5729925

Search of human proteins with 5729925

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5729925 melanoma inhibitory activity [Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5729925 melanoma inhibitory activity [Homo sapiens]                275   1e-74
gi|9910470 otoraplin precursor [Homo sapiens]                         100   2e-22
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    70   4e-13
gi|46094009 melanoma inhibitory activity 2 [Homo sapiens]              68   2e-12
gi|120432042 vav 3 guanine nucleotide exchange factor isoform 2 ...    46   7e-06
gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1 ...    46   7e-06
gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1 ...    41   2e-04
gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2 [...    41   2e-04
gi|199559490 Abelson helper integration site 1 isoform a [Homo s...    37   0.004
gi|199559438 Abelson helper integration site 1 isoform a [Homo s...    37   0.004
gi|31542701 Abelson helper integration site 1 isoform a [Homo sa...    37   0.004
gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]     33   0.049
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    33   0.083
gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Ho...    30   0.41 
gi|194294523 intersectin 2 isoform 3 [Homo sapiens]                    30   0.41 
gi|194294521 intersectin 2 isoform 1 [Homo sapiens]                    30   0.41 
gi|194294525 intersectin 2 isoform 2 [Homo sapiens]                    30   0.41 
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]                30   0.70 
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]                30   0.70 
gi|155723000 mixed lineage kinase 4 [Homo sapiens]                     30   0.70 
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ...    29   0.92 
gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo s...    29   0.92 
gi|33469982 B lymphoid tyrosine kinase [Homo sapiens]                  28   1.6  
gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...    28   2.1  
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom...    28   2.1  
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ...    28   2.7  
gi|182765466 FCH and double SH3 domains 2 [Homo sapiens]               28   2.7  
gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Hom...    27   3.5  
gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Hom...    27   3.5  
gi|193083145 SH3 domain containing 19 isoform c [Homo sapiens]         27   3.5  

>gi|5729925 melanoma inhibitory activity [Homo sapiens]
          Length = 131

 Score =  275 bits (702), Expect = 1e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCR 60
           MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCR
Sbjct: 1   MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCR 60

Query: 61  FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVD 120
           FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVD
Sbjct: 61  FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVD 120

Query: 121 VKTDKWDFYCQ 131
           VKTDKWDFYCQ
Sbjct: 121 VKTDKWDFYCQ 131


>gi|9910470 otoraplin precursor [Homo sapiens]
          Length = 128

 Score =  100 bits (250), Expect = 2e-22
 Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 5/113 (4%)

Query: 22  VRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKL---KG 78
           V G  M +LA +KLCAD EC + IS+A A +DY APDCRF+ + +GQ +YV+SKL    G
Sbjct: 18  VHGIFMDRLASKKLCADDECVYTISLASAQEDYNAPDCRFINVKKGQQIYVYSKLVKENG 77

Query: 79  RGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ 131
            G  FW GSV GD   ++   +GYFP ++V+E +  +    +V T   DF+C+
Sbjct: 78  AGE-FWAGSVYGDGQDEMGV-VGYFPRNLVKEQRVYQEATKEVPTTDIDFFCE 128


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
           sapiens]
          Length = 1907

 Score = 70.5 bits (171), Expect = 4e-13
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 29  KLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSV 88
           + ++ KLCAD ECS  +    AL+D+  PDCRF+   +G  VYV+ KL       W GSV
Sbjct: 31  RFSEHKLCADDECSMLMYRGEALEDFTGPDCRFVNFKKGDPVYVYYKLARGWPEVWAGSV 90

Query: 89  QGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYC 130
                       GYFP  +++        ++ V TD+ DF C
Sbjct: 91  --------GRTFGYFPKDLIQVVHEYTKEELQVPTDETDFVC 124


>gi|46094009 melanoma inhibitory activity 2 [Homo sapiens]
          Length = 654

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 30  LADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQ 89
           LAD K C D EC   I+   A++DY  PDCR+L   +G+ + V+ KL G     W GS  
Sbjct: 26  LADLKKCGDLECEALINRVSAMRDYRGPDCRYLNFTKGEEISVYVKLAGEREDLWAGSKG 85

Query: 90  GDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYC 130
            ++        GYFP   V+ ++     ++ + T + DF C
Sbjct: 86  KEF--------GYFPRDAVQIEEVFISEEIQMSTKESDFLC 118


>gi|120432042 vav 3 guanine nucleotide exchange factor isoform 2
           [Homo sapiens]
          Length = 287

 Score = 46.2 bits (108), Expect = 7e-06
 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 10/68 (14%)

Query: 45  ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
           + +A+A  D+ A D R L++ +G VV +++K+   G  +W G V G        R+G+FP
Sbjct: 230 LGIAIARYDFCARDMRELSLLKGDVVKIYTKMSANG--WWRGEVNG--------RVGWFP 279

Query: 105 SSIVREDQ 112
           S+ V ED+
Sbjct: 280 STYVEEDE 287


>gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1
           [Homo sapiens]
          Length = 847

 Score = 46.2 bits (108), Expect = 7e-06
 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 10/68 (14%)

Query: 45  ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
           + +A+A  D+ A D R L++ +G VV +++K+   G  +W G V G        R+G+FP
Sbjct: 790 LGIAIARYDFCARDMRELSLLKGDVVKIYTKMSANG--WWRGEVNG--------RVGWFP 839

Query: 105 SSIVREDQ 112
           S+ V ED+
Sbjct: 840 STYVEEDE 847


>gi|197304715 vav 2 guanine nucleotide exchange factor isoform 1
           [Homo sapiens]
          Length = 878

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)

Query: 45  ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
           I  AVA  ++ A D R L++  G VV ++S++         G  QG + G+   R+G+FP
Sbjct: 818 IGTAVARYNFAARDMRELSLREGDVVRIYSRI---------GGDQGWWKGETNGRIGWFP 868

Query: 105 SSIVRED 111
           S+ V E+
Sbjct: 869 STYVEEE 875


>gi|40549448 vav 2 guanine nucleotide exchange factor isoform 2
           [Homo sapiens]
          Length = 839

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)

Query: 45  ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
           I  AVA  ++ A D R L++  G VV ++S++         G  QG + G+   R+G+FP
Sbjct: 779 IGTAVARYNFAARDMRELSLREGDVVRIYSRI---------GGDQGWWKGETNGRIGWFP 829

Query: 105 SSIVRED 111
           S+ V E+
Sbjct: 830 STYVEEE 836


>gi|199559490 Abelson helper integration site 1 isoform a [Homo
            sapiens]
          Length = 1196

 Score = 37.0 bits (84), Expect = 0.004
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 13/74 (17%)

Query: 41   CSHPISMA---VALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 97
            C+H +  A   VAL DY A     LTIHRG ++ VF K       +W GS+         
Sbjct: 1046 CNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFK---DNEDWWYGSIG-------K 1095

Query: 98   ARLGYFPSSIVRED 111
             + GYFP++ V  +
Sbjct: 1096 GQEGYFPANHVASE 1109


>gi|199559438 Abelson helper integration site 1 isoform a [Homo
            sapiens]
          Length = 1196

 Score = 37.0 bits (84), Expect = 0.004
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 13/74 (17%)

Query: 41   CSHPISMA---VALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 97
            C+H +  A   VAL DY A     LTIHRG ++ VF K       +W GS+         
Sbjct: 1046 CNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFK---DNEDWWYGSIG-------K 1095

Query: 98   ARLGYFPSSIVRED 111
             + GYFP++ V  +
Sbjct: 1096 GQEGYFPANHVASE 1109


>gi|31542701 Abelson helper integration site 1 isoform a [Homo
            sapiens]
          Length = 1196

 Score = 37.0 bits (84), Expect = 0.004
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 13/74 (17%)

Query: 41   CSHPISMA---VALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 97
            C+H +  A   VAL DY A     LTIHRG ++ VF K       +W GS+         
Sbjct: 1046 CNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFK---DNEDWWYGSIG-------K 1095

Query: 98   ARLGYFPSSIVRED 111
             + GYFP++ V  +
Sbjct: 1096 GQEGYFPANHVASE 1109


>gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]
          Length = 845

 Score = 33.5 bits (75), Expect = 0.049
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 10/64 (15%)

Query: 48  AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSI 107
           A A  D+ A D   L++  G ++ + +K KG+         QG + G++  R+G+FP++ 
Sbjct: 787 AKARYDFCARDRSELSLKEGDIIKILNK-KGQ---------QGWWRGEIYGRVGWFPANY 836

Query: 108 VRED 111
           V ED
Sbjct: 837 VEED 840


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
           sapiens]
          Length = 2161

 Score = 32.7 bits (73), Expect = 0.083
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 11/92 (11%)

Query: 19  GPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKG 78
           G G  GGP   L  R        + P    +A++ Y A     +++ +G+ + V S  +G
Sbjct: 530 GTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEG 589

Query: 79  RGRLFWGGSVQGDYYGDLAARLGYFPSSIVRE 110
               FW G V+G        R+G+FPS  + E
Sbjct: 590 G---FWEGQVKG--------RVGWFPSDCLEE 610


>gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Homo
           sapiens]
          Length = 1118

 Score = 30.4 bits (67), Expect = 0.41
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 12/71 (16%)

Query: 41  CSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGD---YYGDLA 97
           C  P+    A+ +Y A     LT+  G VV V SK            V GD   + G L 
Sbjct: 50  CDAPLPYWTAVFEYEAAGEDELTLRLGDVVEVLSK---------DSQVSGDEGWWTGQLN 100

Query: 98  ARLGYFPSSIV 108
            R+G FPS+ V
Sbjct: 101 QRVGIFPSNYV 111


>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
          Length = 1670

 Score = 30.4 bits (67), Expect = 0.41
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 43   HPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGY 102
            HP+   +A+ DY A +   L+  +GQ++ V +K       +W G + G          G 
Sbjct: 1100 HPVCQVIAMYDYAANNEDELSFSKGQLINVMNK---DDPDWWQGEING--------VTGL 1148

Query: 103  FPSSIVR 109
            FPS+ V+
Sbjct: 1149 FPSNYVK 1155


>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
          Length = 1697

 Score = 30.4 bits (67), Expect = 0.41
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 43   HPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGY 102
            HP+   +A+ DY A +   L+  +GQ++ V +K       +W G + G          G 
Sbjct: 1127 HPVCQVIAMYDYAANNEDELSFSKGQLINVMNK---DDPDWWQGEING--------VTGL 1175

Query: 103  FPSSIVR 109
            FPS+ V+
Sbjct: 1176 FPSNYVK 1182


>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
          Length = 1249

 Score = 30.4 bits (67), Expect = 0.41
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 43   HPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGY 102
            HP+   +A+ DY A +   L+  +GQ++ V +K       +W G + G          G 
Sbjct: 1127 HPVCQVIAMYDYAANNEDELSFSKGQLINVMNK---DDPDWWQGEING--------VTGL 1175

Query: 103  FPSSIVR 109
            FPS+ V+
Sbjct: 1176 FPSNYVK 1182


>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
          Length = 1220

 Score = 29.6 bits (65), Expect = 0.70
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 45   ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
            +   + + DY A +   L  ++GQ++ V +K       +W G V G        ++G FP
Sbjct: 1157 VCQVIGMYDYTAQNDDELAFNKGQIINVLNK---EDPDWWKGEVNG--------QVGLFP 1205

Query: 105  SSIVREDQTLKPGK 118
            S+ V+    + P +
Sbjct: 1206 SNYVKLTTDMDPSQ 1219


>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
          Length = 1721

 Score = 29.6 bits (65), Expect = 0.70
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 45   ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFP 104
            +   + + DY A +   L  ++GQ++ V +K       +W G V G        ++G FP
Sbjct: 1157 VCQVIGMYDYTAQNDDELAFNKGQIINVLNK---EDPDWWKGEVNG--------QVGLFP 1205

Query: 105  SSIVREDQTLKPGK 118
            S+ V+    + P +
Sbjct: 1206 SNYVKLTTDMDPSQ 1219


>gi|155723000 mixed lineage kinase 4 [Homo sapiens]
          Length = 1036

 Score = 29.6 bits (65), Expect = 0.70
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 24  GGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLF 83
           G P    +     +    S    +  AL DY A     L++ RGQ+V V S+        
Sbjct: 19  GAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQLVEVLSQ-------- 70

Query: 84  WGGSVQGD---YYGDLAARLGYFPSSIV 108
              +V GD   + G +  RLG FP++ V
Sbjct: 71  -DAAVSGDEGWWAGQVQRRLGIFPANYV 97


>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
           sapiens]
          Length = 671

 Score = 29.3 bits (64), Expect = 0.92
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 14/69 (20%)

Query: 53  DYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVR--- 109
           D+ A   + LT+ +G +VY+  ++       W   ++G+++G    RLG FP++ V    
Sbjct: 390 DFQAQSPKELTLQKGDIVYIHKEVDKN----W---LEGEHHG----RLGIFPANYVEVLP 438

Query: 110 EDQTLKPGK 118
            D+  KP K
Sbjct: 439 ADEIPKPIK 447


>gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo
           sapiens]
          Length = 329

 Score = 29.3 bits (64), Expect = 0.92
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 14/69 (20%)

Query: 53  DYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVR--- 109
           D+ A   + LT+ +G +VY+  ++       W   ++G+++G    RLG FP++ V    
Sbjct: 48  DFQAQSPKELTLQKGDIVYIHKEVDKN----W---LEGEHHG----RLGIFPANYVEVLP 96

Query: 110 EDQTLKPGK 118
            D+  KP K
Sbjct: 97  ADEIPKPIK 105


>gi|33469982 B lymphoid tyrosine kinase [Homo sapiens]
          Length = 505

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 17/94 (18%)

Query: 38  DQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 97
           D+         VAL DY A + R L + +G+ + V   LKG G  +   S+       + 
Sbjct: 53  DEHLDEDKHFVVALYDYTAMNDRDLQMLKGEKLQV---LKGTGDWWLARSL-------VT 102

Query: 98  ARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ 131
            R GY PS+ V   ++L       + ++W F  Q
Sbjct: 103 GREGYVPSNFVARVESL-------EMERWFFRSQ 129


>gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo
           sapiens]
          Length = 776

 Score = 28.1 bits (61), Expect = 2.1
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 11/49 (22%)

Query: 62  LTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRE 110
           L++ +G ++YV    +G    +W G++ G        R G+FPS+ VRE
Sbjct: 179 LSVCKGDIIYVTRVEEGG---WWEGTLNG--------RTGWFPSNYVRE 216


>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 251

 Score = 28.1 bits (61), Expect = 2.1
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 5   LVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAV-------ALQDYMAP 57
           LV LG  I L+A S PG + GP+  + DR          P   A+       +L+  +  
Sbjct: 32  LVALGFTIFLTALSRPGTKTGPL--MEDRSEGGRARWVMPEIPALWEADAGGSLEFCLCM 89

Query: 58  DCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRED 111
               L       ++ F   K R RL W G         L   LG+  SS  R +
Sbjct: 90  AEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALG--LGFIISSRTRSE 141


>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
           sapiens]
          Length = 665

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 13/78 (16%)

Query: 48  AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSI 107
           A+   DY A     LTI  G+++    K  G    +W G + G        R G FP + 
Sbjct: 4   AIVEFDYQAQHDDELTISVGEIITNIRKEDGG---WWEGQING--------RRGLFPDNF 52

Query: 108 VREDQTLKPGKVDVKTDK 125
           VRE +  K  K D  T+K
Sbjct: 53  VREIK--KEMKKDPLTNK 68


>gi|182765466 FCH and double SH3 domains 2 [Homo sapiens]
          Length = 740

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 50  ALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVR 109
           AL DY       L+   G ++ + +K       FW G   G        R+G FPS +V 
Sbjct: 574 ALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNG--------RIGVFPSVLVE 625

Query: 110 E 110
           E
Sbjct: 626 E 626


>gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Homo
          sapiens]
          Length = 128

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 5  LVCLGVIILLSAFSGPGVRGGPM 27
          LV LG  I L+A S PG + GP+
Sbjct: 32 LVALGFTIFLTALSRPGTKTGPL 54


>gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Homo
          sapiens]
          Length = 133

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 5  LVCLGVIILLSAFSGPGVRGGPM 27
          LV LG  I L+A S PG + GP+
Sbjct: 32 LVALGFTIFLTALSRPGTKTGPL 54


>gi|193083145 SH3 domain containing 19 isoform c [Homo sapiens]
          Length = 731

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 13/63 (20%)

Query: 48  AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYY-GDLAARLGYFPSS 106
           AV L D+ A     L +  G++VY+  K            +  D+Y G+   ++G FP++
Sbjct: 441 AVVLHDFPAEQVDDLNLTSGEIVYLLEK------------IDTDWYRGNCRNQIGIFPAN 488

Query: 107 IVR 109
            V+
Sbjct: 489 YVK 491


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.142    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,470,124
Number of Sequences: 37866
Number of extensions: 227895
Number of successful extensions: 637
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 602
Number of HSP's gapped (non-prelim): 58
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.