VCY 30862

Name: VCY	Sequence: fasta or formatted (125aa)		NCBI GI: 4759304
Description: variable charge, Y-linked		Referenced in: Testes and Sperm Y-linked Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 13 2 C cysteine 0.0 0 0 D aspartate 1.6 2 1 E glutamate 11.2 14 2 F phenylalanine 0.0 0 0 G glycine 9.6 12 2 H histidine 1.6 2 1 I isoleucine 0.0 0 0 K lysine 11.2 14 3 L leucine 4.8 6 1 M methionine 1.6 2 1 N asparagine 0.0 0 0 P proline 16.8 21 2 Q glutamine 4.8 6 1 R arginine 4.8 6 2 S serine 12.8 16 3 T threonine 5.6 7 2 V valine 3.2 4 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 variable charge, Y-linked VCY1B 1.000 variable charge, Y-linked 1B VCX3B 0.865 variable charge, X-linked 3B VCX3A 0.852 variable charge, X-linked 3A VCX 0.838 variable charge, X chromosome VCX2 0.838 variable charge, X-linked 2 NACA 0.087 nascent polypeptide-associated complex alpha subuni... AEBP1 0.083 adipocyte enhancer binding protein 1 precursor [Homo... COL7A1 0.083 alpha 1 type VII collagen precursor COLEC12 0.079 collectin sub-family member 12 CASKIN2 0.079 cask-interacting protein 2 isoform b CASKIN2 0.079 cask-interacting protein 2 isoform a NEFH 0.074 neurofilament, heavy polypeptide 200kDa COL2A1 0.074 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.074 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A2 0.074 alpha 2 type V collagen preproprotein COL9A3 0.070 alpha 3 type IX collagen COL1A1 0.070 alpha 1 type I collagen preproprotein MLL 0.070 myeloid/lymphoid or mixed-lineage leukemia protein [... LOC100293055 0.070 PREDICTED: similar to COL22A1 protein COL19A1 0.070 alpha 1 type XIX collagen precursor COL23A1 0.066 collagen, type XXIII, alpha 1 COL22A1 0.066 collagen, type XXII, alpha 1 COL16A1 0.066 alpha 1 type XVI collagen precursor COL3A1 0.061 collagen type III alpha 1 preproprotein PCLO 0.061 piccolo isoform 2 PCLO 0.061 piccolo isoform 1 COL5A1 0.061 alpha 1 type V collagen preproprotein BASP1 0.061 brain abundant, membrane attached signal protein 1 [... MAP7D1 0.061 MAP7 domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.