Guide to the Human Genome
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Name: DLX4 Sequence: fasta or formatted (168aa) NCBI GI: 20143960
Description:

distal-less homeobox 4 isoform b

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [240aa] distal-less homeobox 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         10           2
 C cysteine            1.8          3           2
 D aspartate           2.4          4           1
 E glutamate           3.0          5           1
 F phenylalanine       3.0          5           1
 G glycine             5.4          9           2
 H histidine           2.4          4           2
 I isoleucine          1.2          2           1
 K lysine              7.1         12           2
 L leucine            13.1         22           2
 M methionine          1.8          3           2
 N asparagine          2.4          4           1
 P proline            11.9         20           2
 Q glutamine           8.9         15           1
 R arginine            6.0         10           2
 S serine             10.7         18           2
 T threonine           4.8          8           1
 V valine              3.0          5           1
 W tryptophan          1.8          3           1
 Y tyrosine            3.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 4 isoform b 
DLX4                  0.862   distal-less homeobox 4 isoform a 
DLX6                  0.394   distal-less homeobox 6 
DLX1                  0.360   distal-less homeobox 1 isoform 1 
DLX2                  0.298   distal-less homeobox 2 
DLX3                  0.292   distal-less homeobox 3 
DLX5                  0.283   distal-less homeobox 5 
MSX1                  0.175   msh homeobox 1 
BARX2                 0.169   BarH-like homeobox 2 
MSX2                  0.163   msh homeobox 2 
BARX1                 0.163   BarH-like homeobox 1 
NKX2-3                0.157   NK2 transcription factor related, locus 3 
NKX2-6                0.154   NK2 transcription factor related, locus 6 
BSX                   0.154   brain specific homeobox 
NKX2-8                0.151   NK2 homeobox 8 
NKX1-2                0.151   NK1 homeobox 2 
NKX1-2                0.151   PREDICTED: NK1 homeobox 2 
NKX1-2                0.151   PREDICTED: NK1 homeobox 2 
NKX1-2                0.151   PREDICTED: NK1 homeobox 2 
NKX3-2                0.151   NK3 homeobox 2 
EN2                   0.145   engrailed homeobox 2 
NKX2-5                0.145   NK2 transcription factor related, locus 5 
NKX3-1                0.142   NK3 homeobox 1 
BARHL2                0.135   BarH-like homeobox 2 
NKX2-4                0.135   NK2 homeobox 4 
GBX1                  0.135   gastrulation brain homeo box 1 
EN1                   0.135   engrailed homeobox 1 
HMX3                  0.135   H6 family homeobox 3 
MEOX2                 0.132   mesenchyme homeobox 2 
HMX2                  0.132   H6 family homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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