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Search of human proteins with 46411180
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens] 746 0.0
gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens] 658 0.0
gi|46411174 muscleblind-like 1 isoform g [Homo sapiens] 481 e-136
gi|46411164 muscleblind-like 1 isoform b [Homo sapiens] 481 e-136
gi|41281591 muscleblind-like 1 isoform a [Homo sapiens] 481 e-136
gi|46411166 muscleblind-like 1 isoform c [Homo sapiens] 474 e-134
gi|19387844 muscleblind-like 3 isoform G [Homo sapiens] 447 e-126
gi|46411172 muscleblind-like 1 isoform f [Homo sapiens] 426 e-119
gi|30315649 muscleblind-like 3 isoform R [Homo sapiens] 400 e-112
gi|46411170 muscleblind-like 1 isoform e [Homo sapiens] 255 4e-68
gi|46411168 muscleblind-like 1 isoform d [Homo sapiens] 255 4e-68
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 47 2e-05
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 44 3e-04
gi|193788659 cleavage and polyadenylation specific factor 4-like... 41 0.001
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 37 0.036
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 37 0.036
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 35 0.080
gi|125987603 cleavage and polyadenylation specific factor 4, 30k... 35 0.10
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 35 0.10
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 35 0.10
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 35 0.14
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 35 0.14
gi|4557317 annexin A11 [Homo sapiens] 34 0.18
gi|22165433 annexin A11 [Homo sapiens] 34 0.18
gi|22165431 annexin A11 [Homo sapiens] 34 0.18
gi|117938768 GNAS complex locus alex [Homo sapiens] 34 0.23
gi|149408126 nemo like kinase [Homo sapiens] 34 0.23
gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo... 33 0.30
gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo... 33 0.30
gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens] 33 0.30
>gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens]
Length = 361
Score = 746 bits (1926), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 301 YQQALTSAQLQQHAAFIPTDNSEIISRNGMECQESALRITKHCYCTYYPVSSSIELPQTA 360
YQQALTSAQLQQHAAFIPTDNSEIISRNGMECQESALRITKHCYCTYYPVSSSIELPQTA
Sbjct: 301 YQQALTSAQLQQHAAFIPTDNSEIISRNGMECQESALRITKHCYCTYYPVSSSIELPQTA 360
Query: 361 C 361
C
Sbjct: 361 C 361
>gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens]
Length = 367
Score = 658 bits (1698), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 301 YQQALTSAQLQQHAAFIPT 319
YQQALTSAQLQQHAAFIPT
Sbjct: 301 YQQALTSAQLQQHAAFIPT 319
>gi|46411174 muscleblind-like 1 isoform g [Homo sapiens]
Length = 342
Score = 481 bits (1239), Expect = e-136
Identities = 246/351 (70%), Positives = 271/351 (77%), Gaps = 19/351 (5%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIPTDNSEIISRNGMECQESALRITKHCYC 345
N + YQQAL + QLQQH AF+P + C A + H C
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLPP--------GSILCMTPATSVDTHNIC 338
>gi|46411164 muscleblind-like 1 isoform b [Homo sapiens]
Length = 370
Score = 481 bits (1238), Expect = e-136
Identities = 242/324 (74%), Positives = 265/324 (81%), Gaps = 11/324 (3%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIP 318
N + YQQAL + QLQQH AF+P
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLP 319
>gi|41281591 muscleblind-like 1 isoform a [Homo sapiens]
Length = 382
Score = 481 bits (1238), Expect = e-136
Identities = 242/324 (74%), Positives = 265/324 (81%), Gaps = 11/324 (3%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIP 318
N + YQQAL + QLQQH AF+P
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLP 319
>gi|46411166 muscleblind-like 1 isoform c [Homo sapiens]
Length = 388
Score = 474 bits (1220), Expect = e-134
Identities = 241/341 (70%), Positives = 266/341 (78%), Gaps = 27/341 (7%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATV-----------------MAFPPGALHP 277
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA + + P L P
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPP 296
Query: 278 LPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQHAAFIP 318
LPKR ALEK+NG +AVFN + YQQAL + QLQQH AF+P
Sbjct: 297 LPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLP 337
>gi|19387844 muscleblind-like 3 isoform G [Homo sapiens]
Length = 354
Score = 447 bits (1150), Expect = e-126
Identities = 212/317 (66%), Positives = 252/317 (79%), Gaps = 13/317 (4%)
Query: 2 ALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRC 61
A+NVA +RDTKWLTLEVCR+FQRGTCSR+D +CKFAHPP+ C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPA 121
+RENCKYLHPP HLKTQLEINGRNNLIQQKTAAAM AQQMQ M + + +FP+ P+
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 122 IGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEV 181
I N ++F PY+ PG+GLVP E++P TPV++PG+PP+ +PG+ KL+R+DKLEV
Sbjct: 123 IPANPPMAFNPYIP--HPGMGLVPAELVPNTPVLIPGNPPLAMPGAVG-PKLMRSDKLEV 179
Query: 182 CREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQ 241
CREFQRGNC RGE DCR+AHP D++MI+ SDNTVT+CMDYIKGRC REKCKYFHPPAHLQ
Sbjct: 180 CREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQ 239
Query: 242 AKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHY 301
A++KAA HQ N +AA+ MA PG L +PKR ALEK NG + VFNP+V H
Sbjct: 240 ARLKAAHHQMNH---------SAASAMALQPGTLQLIPKRSALEKPNGATPVFNPTVFHC 290
Query: 302 QQALTSAQLQQHAAFIP 318
QQALT+ QL Q AFIP
Sbjct: 291 QQALTNLQLPQ-PAFIP 306
>gi|46411172 muscleblind-like 1 isoform f [Homo sapiens]
Length = 340
Score = 426 bits (1095), Expect = e-119
Identities = 220/313 (70%), Positives = 247/313 (78%), Gaps = 18/313 (5%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPL-PKRQ-------ALEK 286
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA + + PL P++Q +L++
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAAMFPWCTVLRQPLCPQQQHLPQVFPSLQQ 296
Query: 287 SNGTSAVFNPSVL 299
TS + + S L
Sbjct: 297 PQPTSPILDASTL 309
>gi|30315649 muscleblind-like 3 isoform R [Homo sapiens]
Length = 334
Score = 400 bits (1028), Expect = e-112
Identities = 186/276 (67%), Positives = 223/276 (80%), Gaps = 7/276 (2%)
Query: 2 ALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRC 61
A+NVA +RDTKWLTLEVCR+FQRGTCSR+D +CKFAHPP+ C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPA 121
+RENCKYLHPP HLKTQLEINGRNNLIQQKTAAAM AQQMQ M + + +FP+ P+
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 122 IGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEV 181
I N ++F PY+ PG+GLVP E++P TPV++PG+PP+ +PG+ KL+R+DKLEV
Sbjct: 123 IPANPPMAFNPYIP--HPGMGLVPAELVPNTPVLIPGNPPLAMPGAVG-PKLMRSDKLEV 179
Query: 182 CREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQ 241
CREFQRGNC RGE DCR+AHP D++MI+ SDNTVT+CMDYIKGRC REKCKYFHPPAHLQ
Sbjct: 180 CREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQ 239
Query: 242 AKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHP 277
A++KAA HQ N +A A+A A T + P A P
Sbjct: 240 ARLKAAHHQMNHSA----ASAMALTNLQLPQPAFIP 271
>gi|46411170 muscleblind-like 1 isoform e [Homo sapiens]
Length = 314
Score = 255 bits (652), Expect = 4e-68
Identities = 151/318 (47%), Positives = 176/318 (55%), Gaps = 67/318 (21%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D E
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTE--------------------------- 33
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CK+ HP + + NGR + ++ LHP P
Sbjct: 34 -----CKFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
I + +A + + L ++PG+P V
Sbjct: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 301 YQQALTSAQLQQHAAFIP 318
YQQAL + QLQQH AF+P
Sbjct: 234 YQQALANMQLQQHTAFLP 251
Score = 94.4 bits (233), Expect = 1e-19
Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
VCR++QRG C+R + +C+FAHP S ++ + V C D +KGRCSRE CKY HPP HL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPV-----GPAIGTNTAI-- 128
Q +I + Q AA A P L P+P P G NT I
Sbjct: 176 --QAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 129 --------SFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTAT 170
+ A + PG L T P +V G+ P TV +T +
Sbjct: 234 YQQALANMQLQQHTAFLPPGSILCMTPATSVVP-MVHGATPATVSAATTS 282
Score = 38.1 bits (87), Expect = 0.012
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 10 DTKWLTLEVCRQFQRGTCSRSDEECKFAHPP-------KSCQVENGRVIACFDSLKGRCS 62
DT T+ VC + +G CSR E+CK+ HPP K+ Q + + A + +
Sbjct: 144 DTNDNTVTVCMDYIKGRCSR--EKCKYFHPPAHLQAKIKAAQYQVNQAAAA-QAAATAAA 200
Query: 63 RENCKYLHPPTHLKTQLE-INGRNNLI-------QQKTAAAMLAQQMQFMFPGTPLHPVP 114
+ + PP + LE NG + QQ A L Q F+ PG+ L P
Sbjct: 201 MGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTP 260
Query: 115 TFPVGPAI--GTNTAISFAPYLAPVTPGVGLVPTEILP 150
V P + T +S A A P +P
Sbjct: 261 ATSVVPMVHGATPATVSAATTSATSVPFAATATANQIP 298
>gi|46411168 muscleblind-like 1 isoform d [Homo sapiens]
Length = 302
Score = 255 bits (652), Expect = 4e-68
Identities = 151/318 (47%), Positives = 176/318 (55%), Gaps = 67/318 (21%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D E
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTE--------------------------- 33
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CK+ HP + + NGR + ++ LHP P
Sbjct: 34 -----CKFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
I + +A + + L ++PG+P V
Sbjct: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 301 YQQALTSAQLQQHAAFIP 318
YQQAL + QLQQH AF+P
Sbjct: 234 YQQALANMQLQQHTAFLP 251
Score = 94.4 bits (233), Expect = 1e-19
Identities = 56/158 (35%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
VCR++QRG C+R + +C+FAHP S ++ + V C D +KGRCSRE CKY HPP HL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAI---SFAP 132
Q +I + Q AA A P L P+P P TA+
Sbjct: 176 --QAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 133 YLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTAT 170
Y + T LP P +V G+ P TV +T +
Sbjct: 234 YQQALANMQLQQHTAFLPPVP-MVHGATPATVSAATTS 270
Score = 37.0 bits (84), Expect = 0.027
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 18/137 (13%)
Query: 10 DTKWLTLEVCRQFQRGTCSRSDEECKFAHPP-------KSCQVENGRVIACFDSLKGRCS 62
DT T+ VC + +G CSR E+CK+ HPP K+ Q + + A + +
Sbjct: 144 DTNDNTVTVCMDYIKGRCSR--EKCKYFHPPAHLQAKIKAAQYQVNQAAAA-QAAATAAA 200
Query: 63 RENCKYLHPPTHLKTQLE-INGRNNLI-------QQKTAAAMLAQQMQFMFPGTPLHPVP 114
+ + PP + LE NG + QQ A L Q F+ P +H
Sbjct: 201 MGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGAT 260
Query: 115 TFPVGPAIGTNTAISFA 131
V A + T++ FA
Sbjct: 261 PATVSAATTSATSVPFA 277
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 47.4 bits (111), Expect = 2e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
VC +F RGTC ++D C F+H V ++ C LKG CS NC Y H
Sbjct: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHP 236
+K+ VC F RG C + + C F+H S + VC ++KG C C Y H
Sbjct: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
Query: 237 PAHLQAKI 244
+A++
Sbjct: 748 YVSRKAEV 755
Score = 30.4 bits (67), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 16 LEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCS-RENCKYLH 70
+ VC F +G CS S+ C ++H S + E C D LKG C CK H
Sbjct: 726 MPVCSYFLKGICSNSN--CPYSHVYVSRKAE-----VCSDFLKGYCPLGAKCKKKH 774
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 43.5 bits (101), Expect = 3e-04
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKS----CQVENGRVIACFDSLKGRCSRENCKYLH 70
+CR F R C R + C++ HP S V I C D CSR NC+++H
Sbjct: 41 ICRDFLRNVCKRG-KRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIH 96
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 181 VCREFQRGNCARGETDCRFAHP--ADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFH 235
+CR+F R C RG+ CR+ HP ++ + + S N C D+ C R C++ H
Sbjct: 41 ICRDFLRNVCKRGKR-CRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIH 96
Score = 32.3 bits (72), Expect = 0.68
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 36/85 (42%)
Query: 182 CREFQRGNCARGETDCRFAH------------------------------PADSTMIDTS 211
C +FQ C+R +CRF H PAD +
Sbjct: 79 CHDFQNKECSR--PNCRFIHGSKEDEDGYKKTGELPPRLRQKVAAGLGLSPAD---LPNG 133
Query: 212 DNTVTVCMDYIKGRCMR-EKCKYFH 235
V +C D++KG C R KCK+ H
Sbjct: 134 KEEVPICRDFLKGDCQRGAKCKFRH 158
Score = 29.6 bits (65), Expect = 4.4
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAH 201
+++ +CR+F +G+C RG C+F H
Sbjct: 135 EEVPICRDFLKGDCQRG-AKCKFRH 158
>gi|193788659 cleavage and polyadenylation specific factor 4-like
[Homo sapiens]
Length = 179
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R + + VC+ + RG C + D CKF H Q + R+ C F S G CS
Sbjct: 54 LCPFRHDRGEKMVVCKHWLRGLCKKGDH-CKFLH-----QYDLTRMPECYFYSKFGDCSN 107
Query: 64 ENCKYLHPPTHLKTQ 78
+ C +LH K+Q
Sbjct: 108 KECSFLHVKPAFKSQ 122
Score = 37.0 bits (84), Expect = 0.027
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKY 233
R +K+ VC+ + RG C +G+ C+F H D T + C Y K G C ++C +
Sbjct: 61 RGEKMVVCKHWLRGLCKKGD-HCKFLHQYDLTRMPE-------CYFYSKFGDCSNKECSF 112
Query: 234 FH 235
H
Sbjct: 113 LH 114
>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
Length = 326
Score = 36.6 bits (83), Expect = 0.036
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 22/158 (13%)
Query: 17 EVCRQFQRGTCSRSDEECKFAHPPKSCQVENG----RVIACFD-SLKGRCS-RENCKYLH 70
E+CR F R +C+FAH + N + C L+GRC C ++H
Sbjct: 107 ELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIH 166
Query: 71 PPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAISF 130
P+ L G +++Q + + L G P P GP++ ++ SF
Sbjct: 167 NPSE---DLAAPGHPPVLRQSISFSGLPS-------GRRTSPPPPGLAGPSLSSS---SF 213
Query: 131 APYLAPVTPG-VGLVPT--EILPTTPVIVPGSPPVTVP 165
+P +P PG + L P+ P TP+ PV P
Sbjct: 214 SPSSSPPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCP 251
Score = 33.9 bits (76), Expect = 0.23
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 145 PTEILPTTPVIVPG-SPPVTVPGSTATQKLLRTDKLEVCREFQRGNCARGETDCRFAHPA 203
P P P + P SP T P TAT K E+CR F R C+FAH
Sbjct: 73 PPGFAPLAPRLGPELSPSPTSP--TATSTTPSRYKTELCRTFSESGRCRYGAKCQFAHGL 130
Query: 204 DSTMIDTSD---NTVTVCMDYIKGRC-MREKCKYFHPPA 238
T Y++GRC +C + H P+
Sbjct: 131 GELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPS 169
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 36.6 bits (83), Expect = 0.036
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 17 EVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSR-ENCKYLH 70
++C+ F G C + D +CKF H ++E + I C L+G C++ ENC Y+H
Sbjct: 276 QICKYFLEGRCIKGD-QCKFDH---DAELEKRKEI-CKFYLQGYCTKGENCIYMH 325
Score = 36.6 bits (83), Expect = 0.036
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 180 EVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMR-EKCKYFH 235
++C+ F G C +G+ C+F H A+ + +C Y++G C + E C Y H
Sbjct: 276 QICKYFLEGRCIKGD-QCKFDHDAE------LEKRKEICKFYLQGYCTKGENCIYMH 325
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 35.4 bits (80), Expect = 0.080
Identities = 36/129 (27%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 71 PPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAISF 130
PP L TQL + + + A + F PG P P P GPA T
Sbjct: 1010 PPPPLHTQLYPGPAQDPLPAHSGA------LPFPSPGPPQPPHPPLAYGPAPSTRP---M 1060
Query: 131 APYLAPVT-----------PGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKL 179
P AP+T P LVP+ P VP PP P + D L
Sbjct: 1061 GPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLL 1120
Query: 180 EVCREFQRG 188
E Q G
Sbjct: 1121 SSSPESQHG 1129
>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Homo sapiens]
Length = 244
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R VC+ + RG C + D+ C+F H + + ++ C F S G CS
Sbjct: 54 MCPFRHISGEKTVVCKHWLRGLCKKGDQ-CEFLH-----EYDMTKMPECYFYSKFGECSN 107
Query: 64 ENCKYLH 70
+ C +LH
Sbjct: 108 KECPFLH 114
Score = 35.0 bits (79), Expect = 0.10
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKYFH 235
+K VC+ + RG C +G+ C F H D T + C Y K G C ++C + H
Sbjct: 63 EKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPE-------CYFYSKFGECSNKECPFLH 114
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R VC+ + RG C + D+ C+F H + + ++ C F S G CS
Sbjct: 54 MCPFRHISGEKTVVCKHWLRGLCKKGDQ-CEFLH-----EYDMTKMPECYFYSKFGECSN 107
Query: 64 ENCKYLH 70
+ C +LH
Sbjct: 108 KECPFLH 114
Score = 35.0 bits (79), Expect = 0.10
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKYFH 235
+K VC+ + RG C +G+ C F H D T + C Y K G C ++C + H
Sbjct: 63 EKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPE-------CYFYSKFGECSNKECPFLH 114
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPG----VGLVPTEILPTTPVIVPGSPP 161
PG P TFP+ P G A++ AP + P++P GL PT L P +VP S
Sbjct: 430 PGPPT--AATFPLPP--GPVPAVA-APQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQV 484
Query: 162 VTVPGSTATQKLL 174
VT+P + +LL
Sbjct: 485 VTLPQAVGPLQLL 497
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 34.7 bits (78), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPV--------IVP 157
PG+ + P+P P I AP + P +VPT +P PV + P
Sbjct: 545 PGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAPAPMPP 604
Query: 158 GSPPVTVPGSTATQKLLRTDKLEVCREFQRGN 189
PP + ++KL D L EF R N
Sbjct: 605 VHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRN 636
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 34.7 bits (78), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPV--------IVP 157
PG+ + P+P P I AP + P +VPT +P PV + P
Sbjct: 610 PGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAPAPMPP 669
Query: 158 GSPPVTVPGSTATQKLLRTDKLEVCREFQRGN 189
PP + ++KL D L EF R N
Sbjct: 670 VHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRN 701
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 99 QQMQFMFPGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPG 158
Q + PG PL P P G T P L P P + LP P+ PG
Sbjct: 323 QPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTPGHSQPIPTPGQPLPPQPIPTPG 382
Query: 159 SP----PVTVPGSTAT 170
P P+ PG T
Sbjct: 383 RPLTPQPIPTPGRPLT 398
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 233 YFHPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMA--FPPGALHPLPKRQALEKSNGT 290
+ HP HL AA H Q +A AAAAAA A PG P A ++ G
Sbjct: 46 HHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYFPSPAPGQAPGP 105
Query: 291 SAVFNPSVLHYQQALTSAQLQQHA 314
+A V A A QH+
Sbjct: 106 AAAAPAQVQAAAAATVKAHHHQHS 129
>gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo
sapiens]
Length = 581
Score = 33.5 bits (75), Expect = 0.30
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 120 PAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVI 155
PA+G T I P + P+ PG+G+VP I P PV+
Sbjct: 36 PALGMMTGI---PPITPMMPGLGIVPPPIPPDMPVV 68
>gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo
sapiens]
Length = 610
Score = 33.5 bits (75), Expect = 0.30
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 120 PAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVI 155
PA+G T I P + P+ PG+G+VP I P PV+
Sbjct: 65 PALGMMTGI---PPITPMMPGLGIVPPPIPPDMPVV 97
>gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens]
Length = 810
Score = 33.5 bits (75), Expect = 0.30
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 17 EVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
E C F TC++ D C F H C+ G C +GRC R+ C++ H
Sbjct: 6 EDCYFFFYSTCTKGDS-CPFRH----CEAAIGNETVCTLWQEGRCFRQVCRFRH 54
Score = 32.3 bits (72), Expect = 0.68
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 180 EVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFH 235
E C F C +G++ C F H + + TVC + +GRC R+ C++ H
Sbjct: 6 EDCYFFFYSTCTKGDS-CPFRH------CEAAIGNETVCTLWQEGRCFRQVCRFRH 54
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,932,660
Number of Sequences: 37866
Number of extensions: 773826
Number of successful extensions: 3934
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 3409
Number of HSP's gapped (non-prelim): 443
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.