Guide to the Human Genome
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Name: MBNL3 Sequence: fasta or formatted (354aa) NCBI GI: 19387844
Description:

muscleblind-like 3 isoform G

Referenced in:

Muscle

Other entries for this name:
alt prot [334aa] muscleblind-like 3 isoform R
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         40           3
 C cysteine            4.2         15           1
 D aspartate           2.5          9           1
 E glutamate           3.4         12           1
 F phenylalanine       3.7         13           1
 G glycine             5.1         18           1
 H histidine           3.7         13           2
 I isoleucine          3.7         13           1
 K lysine              4.2         15           1
 L leucine             7.9         28           1
 M methionine          4.8         17           2
 N asparagine          5.6         20           2
 P proline            11.0         39           3
 Q glutamine           5.4         19           2
 R arginine            5.1         18           1
 S serine              4.5         16           2
 T threonine           7.1         25           2
 V valine              5.1         18           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscleblind-like 3 isoform G 
MBNL3                 0.867   muscleblind-like 3 isoform R 
MBNL2                 0.685   muscleblind-like 2 isoform 1 
MBNL1                 0.637   muscleblind-like 1 isoform a 
MBNL1                 0.601   muscleblind-like 1 isoform b 
MBNL2                 0.591   muscleblind-like 2 isoform 3 
MBNL1                 0.588   muscleblind-like 1 isoform c 
MBNL1                 0.566   muscleblind-like 1 isoform g 
MBNL1                 0.536   muscleblind-like 1 isoform e 
MBNL1                 0.500   muscleblind-like 1 isoform d 
MBNL1                 0.499   muscleblind-like 1 isoform f 
ZC3H10                0.035   zinc finger CCCH-type containing 10 
ZC3H3                 0.035   zinc finger CCCH-type containing 3 
TCERG1                0.021   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.021   transcription elongation regulator 1 isoform 1 [Homo...
CPSF4L                0.020   cleavage and polyadenylation specific factor 4-like...
ZNF207                0.018   zinc finger protein 207 isoform c 
ZNF207                0.018   zinc finger protein 207 isoform a 
ZNF207                0.018   zinc finger protein 207 isoform b 
ZFP36                 0.017   zinc finger protein 36, C3H type, homolog 
ZC3H6                 0.015   zinc finger CCCH-type domain containing 6 
MKRN3                 0.014   makorin ring finger protein 3 
ZC3H4                 0.014   zinc finger CCCH-type containing 4 
HIVEP3                0.014   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.014   human immunodeficiency virus type I enhancer bindin...
ANXA11                0.014   annexin A11 
ANXA11                0.014   annexin A11 
ANXA11                0.014   annexin A11 
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30kDa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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