SF3A1 31529

Name: SF3A1	Sequence: fasta or formatted (793aa)		NCBI GI: 5032087
Description: splicing factor 3a, subunit 1, 120kDa isoform 1		Referenced in: Capping and Splicing Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [728aa] splicing factor 3a, subunit 1, 120kDa isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 54 2 C cysteine 0.1 1 1 D aspartate 4.8 38 2 E glutamate 10.3 82 4 F phenylalanine 3.2 25 1 G glycine 3.8 30 2 H histidine 1.4 11 1 I isoleucine 5.5 44 2 K lysine 7.4 59 2 L leucine 4.9 39 2 M methionine 2.8 22 1 N asparagine 3.0 24 2 P proline 14.8 117 5 Q glutamine 6.9 55 5 R arginine 4.4 35 2 S serine 5.0 40 2 T threonine 4.4 35 2 V valine 7.7 61 3 W tryptophan 0.6 5 1 Y tyrosine 2.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... SF3A1 0.849 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... TTN 0.048 titin isoform N2-A ESX1 0.035 extraembryonic, spermatogenesis, homeobox 1-like [Ho... FLJ22184 0.033 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.033 PREDICTED: hypothetical protein LOC80164 NCOR2 0.033 nuclear receptor co-repressor 2 isoform 1 YLPM1 0.032 YLP motif containing 1 SFRS8 0.031 splicing factor, arginine/serine-rich 8 NCOR2 0.031 nuclear receptor co-repressor 2 isoform 2 FMN2 0.031 formin 2 FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 SFRS15 0.030 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.030 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.030 splicing factor, arginine/serine-rich 15 isoform 1 [... SETD1B 0.030 SET domain containing 1B WASL 0.030 Wiskott-Aldrich syndrome gene-like protein RAPH1 0.030 Ras association and pleckstrin homology domains 1 is... MUC2 0.029 mucin 2 precursor WIPF3 0.028 WAS/WASL interacting protein family, member 3 [Homo... PRR12 0.028 proline rich 12 WASF1 0.028 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.028 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.028 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.028 Wiskott-Aldrich syndrome protein family member 1 [Hom... DIAPH1 0.028 diaphanous 1 isoform 2 DIAPH1 0.028 diaphanous 1 isoform 1 MLL2 0.028 myeloid/lymphoid or mixed-lineage leukemia 2 SF3A2 0.028 splicing factor 3a, subunit 2 WBP11 0.028 WW domain binding protein 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.