SEC62 29577

Name: SEC62	Sequence: fasta or formatted (399aa)		NCBI GI: 4507525
Description: translocation protein 1		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 20 2 C cysteine 1.5 6 1 D aspartate 7.8 31 2 E glutamate 12.3 49 4 F phenylalanine 4.3 17 2 G glycine 6.8 27 2 H histidine 3.0 12 2 I isoleucine 3.8 15 2 K lysine 15.3 61 3 L leucine 6.3 25 3 M methionine 2.0 8 2 N asparagine 2.5 10 1 P proline 3.3 13 1 Q glutamine 2.0 8 2 R arginine 4.3 17 3 S serine 6.3 25 2 T threonine 4.8 19 2 V valine 5.3 21 2 W tryptophan 1.3 5 1 Y tyrosine 2.5 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 translocation protein 1 CCAR1 0.043 cell-cycle and apoptosis regulatory protein 1 LOC100133599 0.038 PREDICTED: hypothetical protein MAP1B 0.037 microtubule-associated protein 1B NSBP1 0.037 nucleosomal binding protein 1 TCOF1 0.034 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.034 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.034 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.034 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.034 Treacher Collins-Franceschetti syndrome 1 isoform a ... TOP1 0.034 DNA topoisomerase I CNGA1 0.033 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.033 cyclic nucleotide gated channel alpha 1 isoform 2 [H... LOC100294088 0.033 PREDICTED: hypothetical protein, partial LOC100133698 0.032 PREDICTED: hypothetical protein LOC100133599 0.032 PREDICTED: hypothetical protein TAF3 0.030 RNA polymerase II transcription factor TAFII140 [Ho... RPGR 0.030 retinitis pigmentosa GTPase regulator isoform C [Hom... LOC100294364 0.030 PREDICTED: hypothetical protein SP100 0.030 nuclear antigen Sp100 isoform 2 ANP32E 0.030 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32E 0.030 acidic (leucine-rich) nuclear phosphoprotein 32 fam... ANP32E 0.030 acidic (leucine-rich) nuclear phosphoprotein 32 fam... SFRS12 0.030 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.030 splicing factor, arginine/serine-rich 12 isoform b [... HMGB1 0.029 high-mobility group box 1 WDR87 0.028 NYD-SP11 protein LOC645490 0.028 PREDICTED: similar to hCG1991922 CHAF1A 0.028 chromatin assembly factor 1, subunit A (p150) HMGB2 0.028 high-mobility group box 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.