RHBDL1 29323

Name: RHBDL1	Sequence: fasta or formatted (438aa)		NCBI GI: 4506525
Description: rhomboid protease 1		Referenced in: Serine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 38 1 C cysteine 2.1 9 1 D aspartate 3.4 15 1 E glutamate 4.6 20 2 F phenylalanine 3.7 16 1 G glycine 9.4 41 2 H histidine 2.5 11 1 I isoleucine 2.7 12 2 K lysine 2.1 9 1 L leucine 12.8 56 2 M methionine 3.4 15 1 N asparagine 1.8 8 1 P proline 8.0 35 4 Q glutamine 4.1 18 2 R arginine 6.4 28 2 S serine 6.4 28 3 T threonine 3.7 16 2 V valine 8.0 35 2 W tryptophan 2.5 11 2 Y tyrosine 3.9 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 rhomboid protease 1 RHBDL3 0.473 rhomboid protease 3 RHBDL2 0.184 rhomboid protease 2 RHBDF2 0.020 rhomboid, veinlet-like 6 isoform 2 RHBDF2 0.020 rhomboid, veinlet-like 6 isoform 1 RHBDF1 0.020 rhomboid family 1 LOC100292124 0.011 PREDICTED: hypothetical protein XP_002346387 LOC100289296 0.009 PREDICTED: hypothetical protein XP_002343918 LOC100288902 0.009 PREDICTED: hypothetical protein XP_002343913 FOXI1 0.009 forkhead box I1 isoform a FOXI1 0.009 forkhead box I1 isoform b COL16A1 0.009 alpha 1 type XVI collagen precursor COL11A1 0.009 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.009 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.009 alpha 1 type XI collagen isoform A preproprotein [Ho... COL2A1 0.009 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.009 collagen, type II, alpha 1 isoform 2 precursor [Hom... PLEKHA4 0.008 pleckstrin homology domain containing family A memb... MYL7 0.008 myosin light chain 2a POLR2A 0.007 DNA-directed RNA polymerase II A PELP1 0.007 proline, glutamic acid and leucine rich protein 1 [... DUSP8 0.007 dual specificity phosphatase 8 SYNPO 0.007 synaptopodin isoform A CX3CL1 0.006 chemokine (C-X3-C motif) ligand 1 PSMC3IP 0.006 PSMC3 interacting protein isoform 2 PSMC3IP 0.006 PSMC3 interacting protein isoform 1 ACTN1 0.006 actinin, alpha 1 isoform c TIGD5 0.006 tigger transposable element derived 5 RAB11FIP3 0.006 rab11-family interacting protein 3 isoform 1 CREBBP 0.006 CREB binding protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.