ACTN1 10869

Name: ACTN1	Sequence: fasta or formatted (887aa)		NCBI GI: 194097352
Description: actinin, alpha 1 isoform c		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [914aa] actinin, alpha 1 isoform a alt prot [892aa] actinin, alpha 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 71 2 C cysteine 1.1 10 1 D aspartate 7.0 62 2 E glutamate 9.2 82 2 F phenylalanine 3.3 29 1 G glycine 4.4 39 1 H histidine 2.9 26 1 I isoleucine 6.8 60 2 K lysine 6.2 55 2 L leucine 9.2 82 3 M methionine 3.5 31 2 N asparagine 4.8 43 2 P proline 3.2 28 2 Q glutamine 5.7 51 2 R arginine 6.2 55 2 S serine 3.9 35 2 T threonine 5.7 51 2 V valine 3.9 35 2 W tryptophan 1.8 16 1 Y tyrosine 2.9 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actinin, alpha 1 isoform c ACTN1 0.992 actinin, alpha 1 isoform a ACTN1 0.983 actinin, alpha 1 isoform b ACTN4 0.855 actinin, alpha 4 ACTN2 0.817 actinin, alpha 2 ACTN3 0.808 actinin, alpha 3 SPTBN1 0.238 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.237 spectrin, beta, non-erythrocytic 1 isoform 1 SPTB 0.230 spectrin beta isoform a SPTB 0.230 spectrin beta isoform b SPTBN2 0.227 spectrin, beta, non-erythrocytic 2 SPTBN4 0.215 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN5 0.180 spectrin, beta, non-erythrocytic 5 SPTAN1 0.142 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.142 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... PLEC1 0.123 plectin 1 isoform 11 PLEC1 0.123 plectin 1 isoform 10 PLEC1 0.123 plectin 1 isoform 8 PLEC1 0.123 plectin 1 isoform 7 PLEC1 0.123 plectin 1 isoform 6 PLEC1 0.123 plectin 1 isoform 3 PLEC1 0.123 plectin 1 isoform 2 PLEC1 0.123 plectin 1 isoform 1 LOC652460 0.120 PREDICTED: similar to plectin 1, partial DST 0.119 dystonin isoform 4 DST 0.119 dystonin isoform 3 DST 0.119 dystonin isoform 2 DST 0.119 dystonin isoform 1 MACF1 0.114 microfilament and actin filament cross-linker protei... SPTA1 0.109 spectrin, alpha, erythrocytic 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.