Guide to the Human Genome
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Name: FOXI1 Sequence: fasta or formatted (378aa) NCBI GI: 21618327
Description:

forkhead box I1 isoform a

Referenced in:

FOX Family

Other entries for this name:
alt prot [283aa] forkhead box I1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         16           1
 C cysteine            1.1          4           1
 D aspartate           4.2         16           2
 E glutamate           4.2         16           2
 F phenylalanine       4.5         17           2
 G glycine             8.7         33           3
 H histidine           1.6          6           1
 I isoleucine          1.9          7           1
 K lysine              4.0         15           2
 L leucine             8.5         32           2
 M methionine          2.4          9           1
 N asparagine          6.1         23           1
 P proline            14.0         53           3
 Q glutamine           3.4         13           1
 R arginine            3.4         13           2
 S serine             13.2         50           3
 T threonine           5.3         20           2
 V valine              3.7         14           1
 W tryptophan          1.3          5           1
 Y tyrosine            4.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box I1 isoform a 
FOXI1                 0.502   forkhead box I1 isoform b 
FOXI3                 0.332   forkhead box I3 
FOXI2                 0.318   forkhead box I2 
FOXC1                 0.182   forkhead box C1 
FOXL1                 0.179   forkhead box L1 
FOXC2                 0.175   forkhead box C2 
FOXL2                 0.158   forkhead box L2 
FOXE1                 0.155   forkhead box E1 
FOXS1                 0.154   forkhead box S1 
FOXD2                 0.154   forkhead box D2 
FOXD3                 0.153   forkhead box D3 
FOXG1                 0.153   forkhead box G1 
FOXD1                 0.151   forkhead box D1 
FOXE3                 0.151   forkhead box E3 
FOXA2                 0.142   forkhead box A2 isoform 2 
FOXA2                 0.142   forkhead box A2 isoform 1 
FOXB1                 0.142   forkhead box B1 
FOXA1                 0.142   forkhead box A1 
FOXD4L1               0.142   forkhead box D4-like 1 
LOC651986             0.141   PREDICTED: similar to forkhead box L2 
LOC651986             0.141   PREDICTED: similar to forkhead box L2 
FOXD4L3               0.141   forkhead box D4-like 3 
FOXD4L2               0.141   forkhead box D4-like 2 
FOXD4                 0.141   forkhead box D4 
FOXD4L5               0.141   forkhead box D4-like 5 
FOXD4L6               0.141   forkhead box D4-like 6 
FOXD4L4               0.141   forkhead box D4-like 4 
FOXA3                 0.138   forkhead box A3 
LOC651986             0.137   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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