Guide to the Human Genome
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Name: FOXL2 Sequence: fasta or formatted (376aa) NCBI GI: 12751477
Description:

forkhead box L2

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.3         65          14
 C cysteine            1.6          6           1
 D aspartate           2.1          8           1
 E glutamate           4.0         15           1
 F phenylalanine       2.4          9           1
 G glycine            12.0         45           7
 H histidine           3.7         14           2
 I isoleucine          1.9          7           2
 K lysine              4.5         17           2
 L leucine             6.1         23           2
 M methionine          2.7         10           2
 N asparagine          2.7         10           2
 P proline            16.2         61           5
 Q glutamine           2.9         11           1
 R arginine            4.3         16           5
 S serine              5.6         21           1
 T threonine           2.4          9           1
 V valine              2.4          9           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box L2 
FOXD1                 0.233   forkhead box D1 
FOXD2                 0.214   forkhead box D2 
FOXD3                 0.199   forkhead box D3 
FOXL1                 0.198   forkhead box L1 
FOXE1                 0.192   forkhead box E1 
FOXC1                 0.183   forkhead box C1 
FOXE3                 0.179   forkhead box E3 
FOXF2                 0.170   forkhead box F2 
FOXC2                 0.167   forkhead box C2 
FOXS1                 0.166   forkhead box S1 
FOXB2                 0.166   forkhead box B2 
FOXF1                 0.166   forkhead box F1 
FOXI1                 0.157   forkhead box I1 isoform a 
FOXD4L1               0.157   forkhead box D4-like 1 
FOXI3                 0.154   forkhead box I3 
FOXI2                 0.154   forkhead box I2 
LOC651986             0.153   PREDICTED: similar to forkhead box L2 
LOC651986             0.153   PREDICTED: similar to forkhead box L2 
LOC651986             0.153   PREDICTED: similar to forkhead box L2 
FOXA1                 0.152   forkhead box A1 
FOXD4L3               0.151   forkhead box D4-like 3 
FOXG1                 0.151   forkhead box G1 
FOXD4L6               0.151   forkhead box D4-like 6 
LOC100288524          0.149   PREDICTED: hypothetical protein XP_002342748 
FOXD4L2               0.149   forkhead box D4-like 2 
FOXD4L5               0.149   forkhead box D4-like 5 
FOXD4L4               0.149   forkhead box D4-like 4 
FOXA2                 0.144   forkhead box A2 isoform 2 
FOXA2                 0.144   forkhead box A2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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