Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPB41L5 Sequence: fasta or formatted (733aa) NCBI GI: 40254949
Description:

erythrocyte membrane protein band 4.1 like 5

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         49           2
 C cysteine            1.4         10           1
 D aspartate           5.6         41           3
 E glutamate           7.6         56           2
 F phenylalanine       3.3         24           2
 G glycine             5.2         38           1
 H histidine           2.6         19           2
 I isoleucine          4.1         30           2
 K lysine              7.0         51           2
 L leucine            11.3         83           2
 M methionine          2.2         16           1
 N asparagine          4.5         33           2
 P proline             5.3         39           2
 Q glutamine           4.1         30           2
 R arginine            5.0         37           2
 S serine              8.3         61           2
 T threonine           6.1         45           2
 V valine              6.7         49           3
 W tryptophan          1.0          7           1
 Y tyrosine            2.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.387   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.368   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L2               0.186   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.186   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.186   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L4A              0.183   erythrocyte protein band 4.1-like 4 
EPB41L1               0.179   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.178   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L3               0.176   erythrocyte membrane protein band 4.1-like 3 
EPB41                 0.174   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.174   erythrocyte membrane protein band 4.1 (elliptocytosis...
PTPN4                 0.170   protein tyrosine phosphatase, non-receptor type 4 [Ho...
FRMD5                 0.161   FERM domain containing 5 isoform 2 
FRMD3                 0.160   FERM domain containing 3 
EPB41                 0.143   erythrocyte membrane protein band 4.1 (elliptocytosi...
FARP1                 0.142   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FARP2                 0.131   FERM, RhoGEF and pleckstrin domain protein 2 
PTPN3                 0.130   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.127   protein tyrosine phosphatase, non-receptor type 3 i...
FRMD7                 0.114   FERM domain containing 7 
LOC644334             0.101   PREDICTED: similar to hCG2040198 
LOC644334             0.101   PREDICTED: similar to hCG2040198 
LOC644334             0.101   PREDICTED: similar to hCG2040198 
PTPN21                0.079   protein tyrosine phosphatase, non-receptor type 21 ...
EZR                   0.075   ezrin 
EZR                   0.075   ezrin 
PTPN14                0.075   protein tyrosine phosphatase, non-receptor type 14 [...
RDX                   0.075   radixin 
MYLIP                 0.071   myosin regulatory light chain interacting protein [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press