Guide to the Human Genome
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Name: EPB41L2 Sequence: fasta or formatted (673aa) NCBI GI: 207113199
Description:

erythrocyte membrane protein band 4.1-like 2 isoform b

Referenced in:

Cytoskeleton

Other entries for this name:
alt mRNA [673aa] erythrocyte membrane protein band 4.1-like 2 isoform b
alt prot [1005aa] erythrocyte membrane protein band 4.1-like 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         44           2
 C cysteine            1.0          7           1
 D aspartate           5.3         36           1
 E glutamate          11.1         75           3
 F phenylalanine       3.1         21           1
 G glycine             5.6         38           2
 H histidine           2.4         16           2
 I isoleucine          3.7         25           1
 K lysine             10.3         69           2
 L leucine             8.5         57           2
 M methionine          1.0          7           1
 N asparagine          1.8         12           1
 P proline             5.5         37           3
 Q glutamine           6.2         42           2
 R arginine            5.6         38           2
 S serine              7.3         49           2
 T threonine           5.5         37           2
 V valine              6.5         44           3
 W tryptophan          0.7          5           1
 Y tyrosine            2.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1-like 2 isofor... 
EPB41L2               1.000   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.909   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L3               0.425   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.425   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.421   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41                 0.389   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.389   erythrocyte membrane protein band 4.1 (elliptocytosis...
EPB41                 0.371   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN4                 0.217   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L5               0.204   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.189   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.189   erythrocyte membrane protein band 4.1 like 4B isofo...
FARP1                 0.184   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FRMD3                 0.175   FERM domain containing 3 
FARP2                 0.171   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD5                 0.171   FERM domain containing 5 isoform 2 
EPB41L4A              0.168   erythrocyte protein band 4.1-like 4 
FRMD7                 0.161   FERM domain containing 7 
PTPN3                 0.152   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.152   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.103   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.095   protein tyrosine phosphatase, non-receptor type 3 i...
MSN                   0.087   moesin 
EZR                   0.086   ezrin 
EZR                   0.086   ezrin 
PTPN14                0.082   protein tyrosine phosphatase, non-receptor type 14 [...
RDX                   0.081   radixin 
NF2                   0.079   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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