Guide to the Human Genome
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Name: EPB41L4B Sequence: fasta or formatted (900aa) NCBI GI: 110624790
Description:

erythrocyte membrane protein band 4.1 like 4B isoform 2

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [518aa] erythrocyte membrane protein band 4.1 like 4B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         73           4
 C cysteine            1.7         15           2
 D aspartate           3.8         34           3
 E glutamate           6.4         58           2
 F phenylalanine       4.3         39           2
 G glycine             6.2         56           3
 H histidine           3.9         35           3
 I isoleucine          3.0         27           1
 K lysine              6.2         56           2
 L leucine             9.8         88           2
 M methionine          1.6         14           2
 N asparagine          3.0         27           2
 P proline             8.6         77           2
 Q glutamine           3.9         35           1
 R arginine            6.2         56           2
 S serine              8.2         74           3
 T threonine           7.0         63           3
 V valine              5.0         45           3
 W tryptophan          0.8          7           1
 Y tyrosine            2.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1 like 4B isofo... 
EPB41L4B              0.522   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L5               0.307   erythrocyte membrane protein band 4.1 like 5 
EPB41L4A              0.140   erythrocyte protein band 4.1-like 4 
EPB41L2               0.137   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.137   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.137   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L3               0.135   erythrocyte membrane protein band 4.1-like 3 
EPB41L1               0.133   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.133   erythrocyte membrane protein band 4.1-like 1 isoform...
PTPN4                 0.130   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41                 0.129   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.129   erythrocyte membrane protein band 4.1 (elliptocytosis...
FRMD3                 0.115   FERM domain containing 3 
FRMD5                 0.112   FERM domain containing 5 isoform 2 
EPB41                 0.102   erythrocyte membrane protein band 4.1 (elliptocytosi...
FARP1                 0.101   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FARP2                 0.097   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD7                 0.092   FERM domain containing 7 
PTPN3                 0.092   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.092   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.058   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN14                0.056   protein tyrosine phosphatase, non-receptor type 14 [...
MYLIP                 0.055   myosin regulatory light chain interacting protein [H...
RDX                   0.050   radixin 
PTPN3                 0.049   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.049   protein tyrosine phosphatase, non-receptor type 3 i...
EZR                   0.049   ezrin 
EZR                   0.049   ezrin 
NF2                   0.048   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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