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Search of human proteins with 40068464
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
(2191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 4523 0.0
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 4484 0.0
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 4459 0.0
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 2078 0.0
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 1825 0.0
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 116 3e-25
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 114 8e-25
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 113 2e-24
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 113 2e-24
gi|48762934 alpha 2 type I collagen [Homo sapiens] 113 2e-24
gi|5453638 AT rich interactive domain 3B [Homo sapiens] 106 3e-22
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 104 8e-22
gi|57864582 hornerin [Homo sapiens] 102 3e-21
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 102 5e-21
gi|109255251 loricrin [Homo sapiens] 99 3e-20
gi|55750053 atrophin-1 [Homo sapiens] 98 8e-20
gi|55750041 atrophin-1 [Homo sapiens] 98 8e-20
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 97 2e-19
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 95 7e-19
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 95 9e-19
gi|55956910 meningioma 1 [Homo sapiens] 93 3e-18
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 92 7e-18
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 92 7e-18
gi|163965366 nascent polypeptide-associated complex alpha subuni... 92 7e-18
gi|62122917 filaggrin family member 2 [Homo sapiens] 91 1e-17
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 91 1e-17
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 91 1e-17
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 91 2e-17
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 89 5e-17
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 89 5e-17
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 4523 bits (11731), Expect = 0.0
Identities = 2191/2191 (100%), Positives = 2191/2191 (100%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
Query: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
Query: 601 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 601 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
Query: 661 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 661 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
Query: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
Query: 841 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 841 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
Query: 901 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 901 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
Query: 961 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT
Sbjct: 961 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
Query: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA
Sbjct: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
Query: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST
Sbjct: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
Query: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA
Sbjct: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
Query: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM
Sbjct: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
Query: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG
Sbjct: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
Query: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
Sbjct: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
Query: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD
Sbjct: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS
Sbjct: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP
Sbjct: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
Query: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
Sbjct: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
Query: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI
Sbjct: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
Query: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF
Sbjct: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
Query: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE
Sbjct: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
Query: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL
Sbjct: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
Query: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL
Sbjct: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
Query: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
Sbjct: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
Query: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
Sbjct: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
Query: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN
Sbjct: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
Query: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
Sbjct: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
Query: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
EGRLLDISISAVLNSLVASVICDVLFQIGQL
Sbjct: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 4484 bits (11629), Expect = 0.0
Identities = 2178/2191 (99%), Positives = 2178/2191 (99%), Gaps = 13/2191 (0%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ MPPQYG
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ-------------MPPQYG 527
Query: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 528 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587
Query: 601 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 588 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647
Query: 661 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 648 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 707
Query: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 708 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767
Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 768 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827
Query: 841 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 828 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 887
Query: 901 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 888 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 947
Query: 961 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT
Sbjct: 948 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1007
Query: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA
Sbjct: 1008 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1067
Query: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST
Sbjct: 1068 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1127
Query: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA
Sbjct: 1128 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1187
Query: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM
Sbjct: 1188 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1247
Query: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG
Sbjct: 1248 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1307
Query: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
Sbjct: 1308 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1367
Query: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD
Sbjct: 1368 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1427
Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS
Sbjct: 1428 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487
Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP
Sbjct: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1547
Query: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
Sbjct: 1548 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1607
Query: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI
Sbjct: 1608 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1667
Query: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF
Sbjct: 1668 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1727
Query: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE
Sbjct: 1728 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1787
Query: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL
Sbjct: 1788 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1847
Query: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL
Sbjct: 1848 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1907
Query: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
Sbjct: 1908 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1967
Query: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
Sbjct: 1968 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2027
Query: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN
Sbjct: 2028 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2087
Query: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
Sbjct: 2088 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2147
Query: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
EGRLLDISISAVLNSLVASVICDVLFQIGQL
Sbjct: 2148 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2178
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 4459 bits (11565), Expect = 0.0
Identities = 2178/2244 (97%), Positives = 2178/2244 (97%), Gaps = 66/2244 (2%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ MPPQYG
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ-------------MPPQYG 527
Query: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 528 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587
Query: 601 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 588 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647
Query: 661 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 648 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 707
Query: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 708 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767
Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 768 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827
Query: 841 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 828 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 887
Query: 901 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 888 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 947
Query: 961 PGESKLPLPLKADGKEEGTPQPESKSK--------------------------------- 987
PGESKLPLPLKADGKEEGTPQPESKSK
Sbjct: 948 PGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSF 1007
Query: 988 --------------------KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS 1027
KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS
Sbjct: 1008 HGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS 1067
Query: 1028 PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY 1087
PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY
Sbjct: 1068 PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY 1127
Query: 1088 IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE 1147
IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE
Sbjct: 1128 IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE 1187
Query: 1148 VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS 1207
VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS
Sbjct: 1188 VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS 1247
Query: 1208 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1267
MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ
Sbjct: 1248 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1307
Query: 1268 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1327
RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK
Sbjct: 1308 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1367
Query: 1328 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1387
RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP
Sbjct: 1368 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1427
Query: 1388 QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR 1447
QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR
Sbjct: 1428 QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR 1487
Query: 1448 INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN 1507
INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN
Sbjct: 1488 INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN 1547
Query: 1508 RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK 1567
RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK
Sbjct: 1548 RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK 1607
Query: 1568 ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE 1627
ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE
Sbjct: 1608 ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE 1667
Query: 1628 YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE 1687
YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE
Sbjct: 1668 YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE 1727
Query: 1688 EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK 1747
EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK
Sbjct: 1728 EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK 1787
Query: 1748 LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS 1807
LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS
Sbjct: 1788 LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS 1847
Query: 1808 EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS 1867
EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS
Sbjct: 1848 EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS 1907
Query: 1868 RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH 1927
RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH
Sbjct: 1908 RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH 1967
Query: 1928 PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC 1987
PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC
Sbjct: 1968 PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC 2027
Query: 1988 LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF 2047
LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF
Sbjct: 2028 LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF 2087
Query: 2048 SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED 2107
SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED
Sbjct: 2088 SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED 2147
Query: 2108 GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI 2167
GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI
Sbjct: 2148 GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI 2207
Query: 2168 SISAVLNSLVASVICDVLFQIGQL 2191
SISAVLNSLVASVICDVLFQIGQL
Sbjct: 2208 SISAVLNSLVASVICDVLFQIGQL 2231
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 2078 bits (5383), Expect = 0.0
Identities = 1222/2361 (51%), Positives = 1448/2361 (61%), Gaps = 361/2361 (15%)
Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
+AA +PP PP P + A + E AGG E A + A GP
Sbjct: 8 AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61
Query: 167 AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A P A ++GG GG GG A + G PG+
Sbjct: 62 AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99
Query: 225 LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
L+NS+ P N+ + P GGGGG G G A G G
Sbjct: 100 LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 279 -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
AVAAAAAA AA GGGGG Y G +S +G
Sbjct: 158 PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217
Query: 309 ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
LSSPR GG PG G AA+ S A+A S++ F QRF
Sbjct: 218 NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 348 ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
AG ATPTLNQLLTSPS R Y GG Y P+
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
SQ A AAA AA+G AQQRSH A MSPG+ G
Sbjct: 331 DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371
Query: 450 -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
P Q SPMD M RPQ YG G+NP+SQ PQQ YPG YG PQRY
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430
Query: 501 PIGIQGRTPGAMAGMQYPQ-------QQDSGDATWKETFWL---------MPPQYGQQGV 544
P+ +QGR AM G+ Y Q Q SG +T + P Y QQ
Sbjct: 431 PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPP 490
Query: 545 S-------GYCQQGQ---------QPYYSQQP-------------------------QPP 563
S Y QQ Q QP YSQQP QPP
Sbjct: 491 SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP 550
Query: 564 HLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYGT 593
+ PQAQ P Q SQQR+ P Q++SQ+ +G+
Sbjct: 551 YSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGS 610
Query: 594 R--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
+ S P + K ED+NL Q RPSSLPDLSGSIDDLP GTE LS VS SG +SSQ
Sbjct: 611 QASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQ 670
Query: 652 GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
G+QSNPAQSPFSPH SPHL I G PSPSPVGSP QSRSGP+SPA++PG+QMPP+PP
Sbjct: 671 GEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPP 729
Query: 712 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
QS+S HP+++QS + Q+RG+M QRNPQM QY Q G ++SP GGQ+H G+
Sbjct: 730 SGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786
Query: 772 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQG 828
S+QQ NS G+YGPQ QYGPQG Y R P Y+ +P+A+Y G GI+ A QMHGQ
Sbjct: 787 SYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP 845
Query: 829 PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA 888
P G +P GRM A M NRP+ NM++M P Q G GM PP +NRK QE A
Sbjct: 846 GIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQETA 898
Query: 889 AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS 948
A M AANS Q+R +P MNQ G+M + PY Q +N+ + ++N Q PPYSM M N+
Sbjct: 899 VA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANN 957
Query: 949 SAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNE 1008
SA +MM G+ KL K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG E
Sbjct: 958 SAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE 1017
Query: 1009 PERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 1068
PERK+WVDRYL F EE+ +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWRELA
Sbjct: 1018 PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA 1077
Query: 1069 TNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPAN 1127
TNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+ D+KK QPK+QPPSPA
Sbjct: 1078 TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG 1137
Query: 1128 SGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDVS 1186
SGS+QGPQTPQST S+SMAE GDLKPPTPASTPH Q+ P+ G RS+++ + D F+D S
Sbjct: 1138 SGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGS 1195
Query: 1187 DSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNS 1246
DS+F KRNSMTPN YQ M+ D+MGRM YEPNKDP+G MRK PGS +PFM+ GQ PN
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGS-DPFMSSGQGPNG 1254
Query: 1247 SMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDR--------------------------- 1279
M D Y+++ + N+ MG RQ +PYG YDR
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNP 1314
Query: 1280 --------------------RHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP-NYKRHM 1318
RH+ YG Q+ QG PSG P + Q +Y QQ NYKR M
Sbjct: 1315 DSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSP-FPSQQTTMYQQQQQNYKRPM 1373
Query: 1319 DGMYGPPAKRHEGDMYNMQYS---------------------------SQQQEMYNQYGG 1351
DG YGPPAKRHEG+MY++ YS S QQ++YNQYG
Sbjct: 1374 DGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGN 1433
Query: 1352 SY-----SGPDRRPI---QGQYPYPYSRERMQGP-GQIQTHGIPPQMMGGPLQSSSSEGP 1402
+Y + +RRP Q Q+P+ + R+R+ P G +PPQMMGGP+Q+S+
Sbjct: 1434 AYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQ 1493
Query: 1403 QQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQ 1462
Q MW RNDM Y Y NRQ G Q P Y G+NRTD+M+ DQR NHE WPSH +++
Sbjct: 1494 QGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQP 1553
Query: 1463 PYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS-MK 1521
PY SA + P+TRPP +YQ PPS+ NHI + SPA R +ENR SPSKSPFL S MK
Sbjct: 1554 PY-GPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMK 1612
Query: 1522 MQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
MQK P VP S + P QPP IRR+ITFPPGSVEA+QPVLKQRR++T KDI TPEAWRV
Sbjct: 1613 MQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRV 1672
Query: 1582 MMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILM 1641
MMSLKSGLLAESTWALDTINILLYDD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL
Sbjct: 1673 MMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILK 1732
Query: 1642 EYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDE 1701
EYEVGDP Q+ L S + G+EEE E + E+EE+EE E+DE
Sbjct: 1733 EYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEEE--ELLGPKLEEEEEEEV----VENDE 1786
Query: 1702 KSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHW 1761
+ IA + D A + K SKFDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLHW
Sbjct: 1787 E--IAFSGKDKPASENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHW 1844
Query: 1762 QLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKK--EQEGKGDSEEQQ-------- 1811
++GGGDTTEHIQTHFESK E+ P R P P A RK EG + +Q+
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSR-PHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPP 1903
Query: 1812 EKSIIATIDDVLSARPGALPEDANPGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSRD 1869
EK I AT+DD+LS R L ED + ESSKFPFGI A+SHRNIK+LEDEP S+D
Sbjct: 1904 EKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKD 1963
Query: 1870 ETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPE 1929
ETPLCT+ WQDSLAKRC+CVSN +RSLSFVPGND EMSKHPGL+LILGKLILLHH+HPE
Sbjct: 1964 ETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPE 2023
Query: 1930 RKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLP 1989
RK+AP TYEKEE++D+GV+C+K EWWWDCLE+LR+NTLVTLANISGQLDLS Y ESICLP
Sbjct: 2024 RKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLP 2083
Query: 1990 ILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSR 2049
+LDGLLHW VCPSAEAQDPF T+GPN+VLSPQRLVLETL KLSIQDNNVDLILATPPFSR
Sbjct: 2084 VLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSR 2143
Query: 2050 QEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGV 2109
EK Y+T+VR++ DRKNPVCREM++ LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED +
Sbjct: 2144 LEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSL 2203
Query: 2110 TMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISI 2169
Q+QQSQ +L+HMQ PP EP SVDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS+
Sbjct: 2204 AATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISV 2263
Query: 2170 SAVLNSLVASVICDVLFQIGQ 2190
S ++NSLV+ VICDVLF IGQ
Sbjct: 2264 SPLMNSLVSQVICDVLFLIGQ 2284
Score = 68.2 bits (165), Expect = 9e-11
Identities = 241/1129 (21%), Positives = 331/1129 (29%), Gaps = 229/1129 (20%)
Query: 16 EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
+ P+ PPHQQ A + QQ Q Q Q QQQQ Q P
Sbjct: 520 QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ S A PQP Q P + G QA SK G
Sbjct: 569 APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 127 ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
ED + P G + +G G P V+ G G A F+ +
Sbjct: 626 EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685
Query: 177 GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
P GP G G SP G + + M P N
Sbjct: 686 SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745
Query: 228 --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
GY P YS P G GG GS G GG
Sbjct: 746 IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804
Query: 272 GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
GG A+ A +A AGG G GG G YG L
Sbjct: 805 PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864
Query: 311 ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
+ P Q G GM PGG + A A A + QN+ P P +
Sbjct: 865 NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918
Query: 362 NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
NQ MM G+ P Y +S + P P S + G A+ M
Sbjct: 919 NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
MG +PA + + GTP + S K +LY +G P
Sbjct: 968 ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018
Query: 478 HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG------DATWKET 531
+ G P GR P + + ++ G + W+E
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 532 FWLMPPQYGQQGVSGYCQQGQQPYYS--------QQPQP------------PHLPPQAQY 571
+ S +Q Q Y+ + P P P + P +
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 572 LPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLP 631
Q PQ S G +PP P+ + L R +S+ + + +D
Sbjct: 1137 GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV-GIQDAFNDGS 1195
Query: 632 TGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSP-VGSPVGSNQ 690
T +S G S + + P+ P+ S+ P P + S G N
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPY-GSMRKAPGSDPFMSSGQGPNG 1254
Query: 691 SRSGPISPASIPG---SQMPPQ-------------------PPGSQSESSSHPALSQSPM 728
P S A+ PG M P+ P G+ S + P L P
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNL--MPS 1312
Query: 729 PQERGFMAGTQRNPQMAQ--------YGPQ---QTGPSMSPHPSPGGQMHAGISSFQQSN 777
+ G + ++ PQ Q YG Q Q PS SP PS M+ +
Sbjct: 1313 NPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRP 1372
Query: 778 SSGTYGPQMSQY-------------GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQM 824
GTYGP ++ G PPA P++ P NQ
Sbjct: 1373 MDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPA-QPQPASQQQAAQPSPQQDVYNQY 1431
Query: 825 HGQGPSQPCGAVPLGRMPSAGMQNR-PF--------------------PGNMSSMTPSSP 863
P+ A R P+ G QN+ PF P M +S
Sbjct: 1432 GNAYPATATAATE--RRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASA 1489
Query: 864 GMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSF----PGMNQSGLMASSS 919
++QQG G T N +++ + Q A +R N G S
Sbjct: 1490 EVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHG 1549
Query: 920 PYSQPMNNSSSLMNTQAPP---YSMAPAMVNSSAASVGLADMMSPGESK 965
P S+ + PP Y P+M N A + P E++
Sbjct: 1550 TRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENR 1598
Score = 48.9 bits (115), Expect = 5e-05
Identities = 223/1049 (21%), Positives = 330/1049 (31%), Gaps = 162/1049 (15%)
Query: 21 PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
PP+ Q + ++ H QQQ QQ QQQ Q Q Q
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 70 QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
Q Q P S S AP P QH ++ + QA P + +
Sbjct: 512 QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
AP + + A Y P +QQ P + +GS A +
Sbjct: 568 PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
A GGQ+ + + S ++ GS+D L EG + PG S G
Sbjct: 615 -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666
Query: 249 GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G V + A+ A + +G G+
Sbjct: 667 SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723
Query: 308 GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
PR G +M P S+++++ G QR Q P ++P L
Sbjct: 724 ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771
Query: 366 TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
+ P M SYG +Y P P+ P + +AG A G
Sbjct: 772 SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
MG G M Q + SH +M GP M GS M P
Sbjct: 832 ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887
Query: 464 --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
+ ++ Q + + + Q+ P YP GG G P G+ +MAGM
Sbjct: 888 GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940
Query: 516 QYPQ-----------QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPH 564
PQ +G A E L + G S+ +
Sbjct: 941 INPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSS 1000
Query: 565 LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLS 624
+ + + +P++ M + Y ++ A G N + +P L L
Sbjct: 1001 STTTNEKITKLYELGGEPERKMWVDRYLAFTEEK-AMGMTNLPAVG----RKPLDLYRLY 1055
Query: 625 GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS---PHLSSIPGGPSPSP 681
S+ ++ T+ + + + G S+ A S + I G P P
Sbjct: 1056 VSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP 1115
Query: 682 ---VGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGT 738
+ +Q + P SPA GS PQ P S S S + + P P A T
Sbjct: 1116 DIFAAADSKKSQPKIQPPSPAG-SGSMQGPQTPQSTSSSMAEGGDLKPPTP------AST 1168
Query: 739 QRNPQMAQYGPQQTGPSMSPHPSPGGQ---MHAGISSFQQSNS---SGTYGPQMSQYGPQ 792
+Q P P MS S G Q S+FQ+ NS + Y P M+
Sbjct: 1169 PH----SQIPPL---PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMM 1221
Query: 793 GNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
G S P Y + A S P G N M G S+ G LG + Q+
Sbjct: 1222 GRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGPRQHY 1279
Query: 850 PFPGNMSSMTPSSPGMSQQGGPGMGPP----MPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
P+ G + + PG+ +G G P MP+ + + Q R S
Sbjct: 1280 PYGGPYDRVR-TEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDS 1338
Query: 906 FPGMNQSGLMASSSPY---------SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLA 956
+ + S SP+ Q N + T PP + S S G
Sbjct: 1339 YGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQG 1398
Query: 957 DMMSPGESKLP--LPLKADGKEEGTPQPE 983
P + +LP P A ++ P P+
Sbjct: 1399 ---QPQQQQLPPAQPQPASQQQAAQPSPQ 1424
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 1825 bits (4726), Expect = 0.0
Identities = 1123/2277 (49%), Positives = 1334/2277 (58%), Gaps = 410/2277 (18%)
Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
+AA +PP PP P + A + E AGG E A + A GP
Sbjct: 8 AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61
Query: 167 AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A P A ++GG GG GG A + G PG+
Sbjct: 62 AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99
Query: 225 LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
L+NS+ P N+ + P GGGGG G G A G G
Sbjct: 100 LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 279 -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
AVAAAAAA AA GGGGG Y G +S +G
Sbjct: 158 PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217
Query: 309 ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
LSSPR GG PG G AA+ S A+A S++ F QRF
Sbjct: 218 NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 348 ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
AG ATPTLNQLLTSPS R Y GG Y P+
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
SQ A AAA AA+G AQQRSH A MSPG+ G
Sbjct: 331 DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371
Query: 450 -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
P Q SPMD M RPQ YG G+NP+SQ PQQ YPG YG PQRY
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430
Query: 501 PIGIQGRTPGAMAGMQYPQ-------QQDSGDATWKETFWL---------MPPQYGQQGV 544
P+ +QGR AM G+ Y Q Q SG +T + P Y QQ
Sbjct: 431 PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPP 490
Query: 545 S-------GYCQQGQ---------QPYYSQQP-------------------------QPP 563
S Y QQ Q QP YSQQP QPP
Sbjct: 491 SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP 550
Query: 564 HLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYGT 593
+ PQAQ P Q SQQR+ P Q++SQ+ +G+
Sbjct: 551 YSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGS 610
Query: 594 R--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
+ S P + K ED+NL Q RPSSLPDLSGSIDDLP GTE LS VS SG +SSQ
Sbjct: 611 QASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQ 670
Query: 652 GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
G+QSNPAQSPFSPH SPHL I G PSPSPVGSP QSRSGP+SPA++PG+QMPP+PP
Sbjct: 671 GEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPP 729
Query: 712 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
QS+S HP+++QS + Q+RG+M QRNPQM QY Q G ++SP GGQ+H G+
Sbjct: 730 SGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786
Query: 772 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQG 828
S+QQ NS G+YGPQ QYGPQG Y R P Y+ +P+A+Y G GI+ A QMHGQ
Sbjct: 787 SYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP 845
Query: 829 PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA 888
P G +P GRM A M NRP+ NM++M P Q G GM PP +NRK QE A
Sbjct: 846 GIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQETA 898
Query: 889 AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS 948
A M AANS Q+R +P MNQ G+M + PY Q +N+ + ++N Q PPYSM M N+
Sbjct: 899 VA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANN 957
Query: 949 SAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNE 1008
SA +MM G+ KL K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG E
Sbjct: 958 SAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE 1017
Query: 1009 PERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 1068
PERK+WVDRYL F EE+ +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWRELA
Sbjct: 1018 PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA 1077
Query: 1069 TNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPAN 1127
TNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+ D+KK QPK+QPPSPA
Sbjct: 1078 TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG 1137
Query: 1128 SGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDVS 1186
SGS+QGPQTPQST S+SMAE GDLKPPTPASTPH Q+ P+ G RS+++ + D F+D S
Sbjct: 1138 SGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGS 1195
Query: 1187 DSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNS 1246
DS+F KRNSMTPN YQ M+ D+MGRM YEPNKDP+G MRK PG S+PFM+ GQ PN
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG-SDPFMSSGQGPNG 1254
Query: 1247 SMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPG 1306
M D Y+++ + N+ MG RQ +PYG YDR + PG G P G G QP
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDR-----VRTEPGIG-PEGNMSTGAPQPN 1308
Query: 1307 LYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYP 1366
L P P+ GMY P Y Q QQQ+ ++ YG +S
Sbjct: 1309 LMPSNPD-----SGMYSP-------SRYPPQQQQQQQQRHDSYGNQFS------------ 1344
Query: 1367 YPYSRERMQGPGQIQTHGIPPQMMGGPLQS-SSSEGPQQNMWAARNDMPYPYQNRQGPGG 1425
T G P G P S ++ QQ ++ +P P +NR P
Sbjct: 1345 ---------------TQGTP---SGSPFPSQQTTMYQQQQQVSSPAPLPRPMENRTSP-- 1384
Query: 1426 PTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTP 1485
+ P++ S MQ PP P+
Sbjct: 1385 ----------------------------------SKSPFLHSGMKMQK-AGPPVPA---- 1405
Query: 1486 PSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIR 1545
+HI+ AP V P + +T PP
Sbjct: 1406 ----SHIAPAP----------------------------VQPPMIRRDITFPP------- 1426
Query: 1546 REITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLY 1605
GSVEA+QPVLKQRR++T KDI TPEAWRVMMSLKSGLLAESTWALDTINILLY
Sbjct: 1427 -------GSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLY 1479
Query: 1606 DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQS 1665
DD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL EYEVGDP Q+ L S
Sbjct: 1480 DDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSP 1539
Query: 1666 LADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASK 1725
+ G+EEE E + E+EE+E E E+DE+ IA + D A + K SK
Sbjct: 1540 APMEGGEEEE--ELLGPKLEEEEEE----EVVENDEE--IAFSGKDKPASENSEEKLISK 1591
Query: 1726 FDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPR 1785
FDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLHW++GGGDTTEHIQTHFESK E+ P
Sbjct: 1592 FDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLP- 1650
Query: 1786 RRPPPPLSSAGRK--KEQEGKGDSEEQQ--------EKSIIATIDDVLSARPGALPEDAN 1835
RP P A RK EG + +Q+ EK I AT+DD+LS R L ED
Sbjct: 1651 SRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGA 1710
Query: 1836 PGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNI 1893
+ ESSKFPFGI A+SHRNIK+LEDEP S+DETPLCT+ WQDSLAKRC+CVSN
Sbjct: 1711 KSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNT 1770
Query: 1894 VRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDE 1953
+RSLSFVPGND EMSKHPGL+LILGKLILLHH+HPERK+AP TYEKEE++D+GV+C+K E
Sbjct: 1771 IRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVE 1830
Query: 1954 WWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVG 2013
WWWDCLE+LR+NTLVTLANISGQLDLS Y ESICLP+LDGLLHW VCPSAEAQDPF T+G
Sbjct: 1831 WWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLG 1890
Query: 2014 PNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMS 2073
PN+VLSPQRLVLETL KLSIQDNNVDLILATPPFSR EK Y+T+VR++ DRKNPVCREM+
Sbjct: 1891 PNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMA 1950
Query: 2074 MALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPS 2133
+ LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED + Q+QQSQ +L+HMQ PP EP S
Sbjct: 1951 VVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTS 2010
Query: 2134 VDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQ 2190
VDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS+S ++NSLV+ VICDVLF IGQ
Sbjct: 2011 VDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQ 2067
Score = 59.7 bits (143), Expect = 3e-08
Identities = 215/971 (22%), Positives = 284/971 (29%), Gaps = 194/971 (19%)
Query: 16 EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
+ P+ PPHQQ A + QQ Q Q Q QQQQ Q P
Sbjct: 520 QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ S A PQP Q P + G QA SK G
Sbjct: 569 APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 127 ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
ED + P G + +G G P V+ G G A F+ +
Sbjct: 626 EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685
Query: 177 GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
P GP G G SP G + + M P N
Sbjct: 686 SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745
Query: 228 --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
GY P YS P G GG GS G GG
Sbjct: 746 IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804
Query: 272 GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
GG A+ A +A AGG G GG G YG L
Sbjct: 805 PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864
Query: 311 ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
+ P Q G GM PGG + A A A + QN+ P P +
Sbjct: 865 NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918
Query: 362 NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
NQ MM G+ P Y +S + P P S + G A+ M
Sbjct: 919 NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
MG +PA + + GTP + S K +LY +G P
Sbjct: 968 ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018
Query: 478 HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG------DATWKET 531
+ G P GR P + + ++ G + W+E
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 532 FWLMPPQYGQQGVSGYCQQGQQPYYS--------QQPQP------------PHLPPQAQY 571
+ S +Q Q Y+ + P P P + P +
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 572 LPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLP 631
Q PQ S G +PP P+ + L R +S+ G D
Sbjct: 1137 GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV----GIQDAFN 1192
Query: 632 TGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQS 691
G+++T S + NP P S + S + G S P P GS
Sbjct: 1193 DGSDSTFQKRNSMT---------PNPGYQP-----SMNTSDMMGRMSYEPNKDPYGS--M 1236
Query: 692 RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
R P S + Q P G ++ P L M Q P Y +
Sbjct: 1237 RKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVA-------MGPRQHYPYGGPYDRVR 1289
Query: 752 TGPSMSPHPSPGGQMHAGI--SSFQQSN-SSGTYGPQMSQYGPQGNYSRPPAYSGVPSA- 807
T P + P G M G + SN SG Y P S+Y PQ + + +
Sbjct: 1290 TEPGIGPE----GNMSTGAPQPNLMPSNPDSGMYSP--SRYPPQQQQQQQQRHDSYGNQF 1343
Query: 808 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ 867
S G G + Q Q PL R M+NR P + GM
Sbjct: 1344 STQGTPSGSPFPSQQTTMYQQQQQVSSPAPLPR----PMENRTSPSKSPFL---HSGMKM 1396
Query: 868 QGGPGMGPPMP 878
Q GPP+P
Sbjct: 1397 QKA---GPPVP 1404
Score = 45.4 bits (106), Expect = 6e-04
Identities = 201/931 (21%), Positives = 296/931 (31%), Gaps = 144/931 (15%)
Query: 21 PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
PP+ Q + ++ H QQQ QQ QQQ Q Q Q
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 70 QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
Q Q P S S AP P QH ++ + QA P + +
Sbjct: 512 QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
AP + + A Y P +QQ P + +GS A +
Sbjct: 568 PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
A GGQ+ + + S ++ GS+D L EG + PG S G
Sbjct: 615 -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666
Query: 249 GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G V + A+ A + +G G+
Sbjct: 667 SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723
Query: 308 GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
PR G +M P S+++++ G QR Q P ++P L
Sbjct: 724 ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771
Query: 366 TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
+ P M SYG +Y P P+ P + +AG A G
Sbjct: 772 SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
MG G M Q + SH +M GP M GS M P
Sbjct: 832 ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887
Query: 464 --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
+ ++ Q + + + Q+ P YP GG G P G+ +MAGM
Sbjct: 888 GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940
Query: 516 QYPQ-----------QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPH 564
PQ +G A E L + G S+ +
Sbjct: 941 INPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSS 1000
Query: 565 LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLS 624
+ + + +P++ M + Y ++ A G N + +P L L
Sbjct: 1001 STTTNEKITKLYELGGEPERKMWVDRYLAFTEEK-AMGMTNLPAVG----RKPLDLYRLY 1055
Query: 625 GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS---PHLSSIPGGPSPSP 681
S+ ++ T+ + + + G S+ A S + I G P P
Sbjct: 1056 VSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP 1115
Query: 682 ---VGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGT 738
+ +Q + P SPA GS PQ P S S S + + P P A T
Sbjct: 1116 DIFAAADSKKSQPKIQPPSPAG-SGSMQGPQTPQSTSSSMAEGGDLKPPTP------AST 1168
Query: 739 QRNPQMAQYGPQQTGPSMSPHPSPGGQ---MHAGISSFQQSNS---SGTYGPQMSQYGPQ 792
+Q P P MS S G Q S+FQ+ NS + Y P M+
Sbjct: 1169 PH----SQIPPL---PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMM 1221
Query: 793 GNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
G S P Y + A S P G N M G S+ G LG + Q+
Sbjct: 1222 GRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGPRQHY 1279
Query: 850 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTV 880
P+ G + + PG+ +G G P P +
Sbjct: 1280 PYGGPYDRVR-TEPGIGPEGNMSTGAPQPNL 1309
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 116 bits (290), Expect = 3e-25
Identities = 241/1007 (23%), Positives = 325/1007 (32%), Gaps = 151/1007 (14%)
Query: 59 QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP--- 115
Q Q +Q + Q+ P + +G G PQ GP EQ G D G P
Sbjct: 24 QGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGR 82
Query: 116 ---------PGPPLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV-- 159
PGPP PG PP +G + AGG E G LG Q P+
Sbjct: 83 DGEPGTPGNPGPP--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMG 138
Query: 160 PGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMM 208
P G GPA P + G+ P GP G GP D G+
Sbjct: 139 PRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERG 198
Query: 209 HSASAAAAGAPGSMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG-------- 259
A G PG+ P H GYP PG G G G G
Sbjct: 199 PPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPR 257
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV---------- 309
G G G G AGA GA A G GG G+ G+ G
Sbjct: 258 GLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317
Query: 310 -LSSPRQQGG--------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGAT 358
PR + G G PG G +A G F G P GAT
Sbjct: 318 GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 377
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMG 416
L + P + + G P P+ PQ AG G + G+G
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVG 432
Query: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG--- 472
G + A + + + P +PG GP+ + +G+ DP P L G
Sbjct: 433 PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARG 492
Query: 473 -MGSNPHSQPQ-----QSSPYPGGSYGPPGPQ--RYPIGIQGRTPGAMAGMQYPQQQDSG 524
G + PQ +P G GPPGPQ R G+ G PG P +
Sbjct: 493 LTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMG-FPGPKGANGEPGKAGEK 551
Query: 525 DATWKETFWLMPPQYGQQGVSG-------YCQQGQQ-----PYYSQQPQPPHLPPQAQYL 572
+P + G+ G +G ++G+Q + P PP P +
Sbjct: 552 GLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEG--- 608
Query: 573 PSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 630
+ + P + + G R + P G P + L + P LP G+ D
Sbjct: 609 -GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL-----QGPRGLPGTPGT--DG 660
Query: 631 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ 690
P G S G+ G Q P + + A P G P G+P G +
Sbjct: 661 PKGA----SGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVG-EKGPEGAP-GKDG 714
Query: 691 SR--SGPISPASIPGSQ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
R +GPI P G+ PP P GS + ++ P GF +
Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774
Query: 743 QMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYS 802
Q G Q +PG Q +G Q +G GP+ ++ G QG PP +
Sbjct: 775 QPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGAT 827
Query: 803 GVPSASYSGPGPGMGISANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPS 861
G P A+ PG +N GP P G P G +G R G P+
Sbjct: 828 GFPGAAGRVGPPG----SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPA 881
Query: 862 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPY 921
P ++G PG P + A Q + FPG+ P
Sbjct: 882 GP-PGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPS 932
Query: 922 SQP-MNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP 967
+P + + PP + P + A G SPG P
Sbjct: 933 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG--SPGADGPP 977
Score = 108 bits (271), Expect = 4e-23
Identities = 179/653 (27%), Positives = 212/653 (32%), Gaps = 103/653 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
GA G GP E+ + G S G PPGPP KPGD+ P + G P G
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 628
Query: 141 RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
R E G G+ PG G GP +P P + GP G +GP G
Sbjct: 629 RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 672
Query: 199 GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Q PG+ M AA AG G D + EG P G + P G G
Sbjct: 673 AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 730
Query: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
G G G G G AGA GA A AG G G G+ G
Sbjct: 731 NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 790
Query: 316 QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
G GP G G + A G Q G P A
Sbjct: 791 AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 833
Query: 375 YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
G P S+ + PP P P + GA G AG + G Q A P
Sbjct: 834 -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 887
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
P+ + G PGP Q G P P L G P +Q +P
Sbjct: 888 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 944
Query: 490 GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQ 549
G GPPGP P G+ G P G + D P + G GV G
Sbjct: 945 GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGP-----------PGRDGAAGVKGDRG 990
Query: 550 QGQQPYYSQQPQPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP----- 601
+ P PP P A Q + Q M G G R Q P P
Sbjct: 991 ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1050
Query: 602 --GKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQ 659
G+P L + L L G P G S ASG G + P
Sbjct: 1051 EAGEPGERGLK--GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG- 1098
Query: 660 SPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 712
P P + IPG P+G P + RSG PA PG+ PP PPG
Sbjct: 1099 -PVGPSGKDGANGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1143
Score = 106 bits (264), Expect = 3e-22
Identities = 214/848 (25%), Positives = 271/848 (31%), Gaps = 130/848 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG GP E+ G G A P G P + G A PK GR
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP--GERGPSGLAGPKGANGDPGRPG 483
Query: 144 HPGL-GALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAP--ASGGPG------------ 187
PGL GA G T +P A P G GP+ P + G P A G PG
Sbjct: 484 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG 543
Query: 188 --GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPL-QNSHEGYPN-SQCNHYP 241
G+AG + G +PG+ + AAG PG P + +G P S P
Sbjct: 544 EPGKAG----EKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 599
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
G P GG G G G +G G G G G + A G G G
Sbjct: 600 GPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD 659
Query: 302 GSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
G G P QG + G PG GAA ++ G + G G
Sbjct: 660 GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-- 717
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
L + P P G+ E PP P ++ A G AG
Sbjct: 718 LTGPIGPPGP-----AGANGE-KGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA---- 767
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
G A P Q + G PGP P P + P+ G+
Sbjct: 768 -GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK----GARGAQG 822
Query: 481 PQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQDSGDATWKETFWLMP 536
P ++ +PG G GPPG P G G P +G P+ + DSG P
Sbjct: 823 PPGATGFPGAAGRVGPPGSNGNP-GPPG--PPGPSGKDGPKGARGDSG-----------P 868
Query: 537 P----QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG 592
P + G QG +G + +P P PP Q L Q P Q + G+
Sbjct: 869 PGRAGEPGLQGPAGPPGEKGEPG-DDGPSGAEGPPGPQGLAGQRGIVGLPGQ-RGERGFP 926
Query: 593 TRSQPPLAPGKPNHEDLNLIQ-QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
P PGK + + P P L+G + G+ +
Sbjct: 927 GLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVK 986
Query: 652 GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
GD+ P S P GP+ Q GP PA G Q P P
Sbjct: 987 GDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPR 1046
Query: 712 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
G + E+ P ERG GP P P G A
Sbjct: 1047 GDKGEAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA--- 1084
Query: 772 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
SG GP GP+G PGP +G S + +G GP
Sbjct: 1085 -------SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPI 1115
Query: 831 QPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQ 885
P G P GR G P PG P PG+ G+GP P P +A
Sbjct: 1116 GPPG--PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1173
Query: 886 EAAAAVMQ 893
+AA + Q
Sbjct: 1174 QAAGGLRQ 1181
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 114 bits (286), Expect = 8e-25
Identities = 209/815 (25%), Positives = 263/815 (32%), Gaps = 119/815 (14%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP---PLLSKPGDEDDAPPKMGEPAGG 140
G G PG G A + A G P GP P P E AP G P G
Sbjct: 462 GEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAG-PRGA 520
Query: 141 RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
E PG + +PG GGP + + P S G GR GP G +
Sbjct: 521 AGE-PGRDGVPGGPGMRGMPGSPGGPGSDGK------PGPPGSQGESGRPGPP-GPSGPR 572
Query: 201 QSPG-MGMM----------HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
PG MG + G PG P + E P PG + PG
Sbjct: 573 GQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP----PGPTGPGGD 628
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G G G G G GG G G A A A GG G G G G+
Sbjct: 629 KGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGL 688
Query: 310 LSSPRQQGGGMMMGP-GGGGAASLSKAAAGSAAGGFQRFAGQ------------------ 350
+P +GG GP GG GAA + G Q G+
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGG 748
Query: 351 --------NQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAA 400
P G T + + P + GG+ P + P P +
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGP 808
Query: 401 AAGAAAGGQQA-AAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP 459
A A GQ G G G + P A S PA PG G + +GSP
Sbjct: 809 AGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQG--VKGERGSP 866
Query: 460 MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ 519
P P G+ P S P P GS G GP P G G PG+ G+ P
Sbjct: 867 GGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPG-PAGNTG-APGS-PGVSGP- 922
Query: 520 QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQR 579
+ D+G K + P G G G PP +P
Sbjct: 923 KGDAGQPGEKGS----PGAQGPPGAPGPLGIAGITGARGLAGPPGMP------------- 965
Query: 580 YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 639
P+ +G S P A G P LP L+G+ +
Sbjct: 966 -GPRGSPGPQGVKGESGKPGANGLSGERG-----PPGPQGLPGLAGTAGEPGRDGNPGSD 1019
Query: 640 SAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR--SGPI 696
GS +GD+ + SP PG P P PVG P G + R SGP
Sbjct: 1020 GLPGRDGSPGGKGDRGE--------NGSPGAPGAPGHPGPPGPVG-PAGKSGDRGESGPA 1070
Query: 697 SPASIP---GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRNPQMAQYGPQ- 750
PA P GS+ P P G + + + + RGF G +P GP
Sbjct: 1071 GPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP-----GPAG 1125
Query: 751 QTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSR-----PPAYSGV 804
Q G SP P+ G + G S + +SG GP + GP+GN P + G
Sbjct: 1126 QQGAIGSPGPA-GPRGPVGPSGPPGKDGTSGHPGP-IGPPGPRGNRGERGSEGSPGHPGQ 1183
Query: 805 PS--ASYSGPGPGMGISANNQMHGQGPSQPCGAVP 837
P PGP G + G G + G P
Sbjct: 1184 PGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAP 1218
Score = 107 bits (266), Expect = 2e-22
Identities = 221/878 (25%), Positives = 279/878 (31%), Gaps = 151/878 (17%)
Query: 65 QQQQQQQQQHPISNNNSLGGAGG---GAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL 121
Q Q + + + ++GG G A PGP G + G PPG P
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 122 SKPGDEDDAPPKMGE--PAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYY 176
+ P P +G PAG G PG G G PP G GPA +P F
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPP-----GIKGPAGIPGFPGMK 263
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
G G GR G + G +PG+ + GAPG M P G P +
Sbjct: 264 GHR-----GFDGRNG----EKGETGAPGL-KGENGLPGENGAPGPMGP-----RGAPGER 308
Query: 237 CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
RPG G G G G G G G A + A G G
Sbjct: 309 -------GRPGLPGAAGA-------RGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVG 354
Query: 297 GGGYGGSSAGYGVLSSPRQQGGGMMMGPGG--------GGAASLSKAAAGSAAG-----G 343
G GS+ G P QG GP G GG + A A G G
Sbjct: 355 PAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 344 FQRFAGQNQHP----SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
AG N P P N P P P P
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474
Query: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR-SQGS 458
A A G++ A G A P ++ PA G PGP R + G
Sbjct: 475 ANGLPGAAGERGAPGF---------RGPAGPNGIPGEK--GPAGERGAPGPAGPRGAAGE 523
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP---PGPQRYPIGIQGRTPGAMAGM 515
P V P + GM +P P P GS G PGP P G +G+ PG M
Sbjct: 524 PGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPG-PSGPRGQ-PGVMG-- 579
Query: 516 QYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ 575
+P + + A K P G QG G + G+ PQ P P P
Sbjct: 580 -FPGPKGNDGAPGKNGERGGPGGPGPQGPPG--KNGE-----TGPQGPPGPTG----PGG 627
Query: 576 SQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTE 635
+ P +G PP GKP + + P G D E
Sbjct: 628 DKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG-----PKGDAGAPGAPGGKGDAGAPGE 682
Query: 636 ---ATLSSAVSASGSTSSQGDQ--SNPAQSPFSPHA--SPHLSSIPG-----------GP 677
L+ A G G + A P P A +P L +PG G
Sbjct: 683 RGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGD 742
Query: 678 SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAG 737
P G + GP P G P PG + E + P L +AG
Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGA-PGLPG---------IAG 792
Query: 738 TQRNP-QMAQYGPQQTGPSMSP-----HPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYG 790
+ +P + + GP GP+ P + PGG+ G + + G GP G
Sbjct: 793 PRGSPGERGETGP--PGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGS-G 849
Query: 791 PQGNYSRPPAYSGVPSASYSGPGPG-MGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
P G PP GV S GPG G + G P P G S G
Sbjct: 850 PAG----PPGPQGVKGERGSPGGPGAAGFPGARGLPGP-PGSNGNPGPPGPSGSPGKDGP 904
Query: 850 PFPGNMSSMTPSSPGMS----------QQGGPG-MGPP 876
P P ++ P SPG+S ++G PG GPP
Sbjct: 905 PGPAG-NTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP 941
Score = 77.4 bits (189), Expect = 1e-13
Identities = 180/778 (23%), Positives = 240/778 (30%), Gaps = 127/778 (16%)
Query: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
P G GP +P N G P G G GP PG+ + P
Sbjct: 107 PKGDPGPPGIPGRNGDPG--IPGQPGSPGSPGP----------PGI------CESCPTGP 148
Query: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
+ P +S++ GY P G G G G G G G G G
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 280 AVAAAAAAAAAAAGGGGGGGYGGSS------AGYGVLSSPRQQGGGMMMG-PGGGGAASL 332
A + A G G G G S G+ P +G + G PG G
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGF 268
Query: 333 SKAAAGSAAGGFQRFAGQN-----------QHPSGATPTLNQLLTSPSPMMRSYGGSYPE 381
G G+N P GA + + R G+
Sbjct: 269 DGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGS 328
Query: 382 YSSPSAPPPP-----PSQPQSQAAAAGAAAGGQQAAAGM----GLGKDMGAQYAAASP-- 430
P P PP P P ++ A + G A G G GAQ P
Sbjct: 329 DGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGI 388
Query: 431 -AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
+ PA PG PG R P G P + P
Sbjct: 389 NGSPGGKGEMGPAGIPGAPGLMGARGPPGPA-----------GANGAPGLRGGAGEPGKN 437
Query: 490 GSYGPPGP--QRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGY 547
G+ G PGP +R GI G PGA + +D D + P + G G+ G
Sbjct: 438 GAKGEPGPRGERGEAGIPG-VPGA-------KGEDGKDGS--------PGEPGANGLPGA 481
Query: 548 CQQGQQPYYSQQPQPPHLPPQ-----AQYLPSQSQQR---YQPQQDMSQEGYGTRSQP-- 597
+ P + P +P + + P + R +P +D G G R P
Sbjct: 482 AGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGS 541
Query: 598 ---PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS--SAVSASGSTSSQG 652
P + GKP + + RP P SG P G + G+ G
Sbjct: 542 PGGPGSDGKPGPPG-SQGESGRPGP-PGPSG-----PRGQPGVMGFPGPKGNDGAPGKNG 594
Query: 653 DQSNP-AQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
++ P P P + G P P+ G G + GP +PG+ PP
Sbjct: 595 ERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKG-DTGPPGPQGLQGLPGTGGPPGEN 653
Query: 712 GSQSESSSHPALSQSPMPQERGFM-AGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGI 770
G E P +G A +R P P G + P P GG+ AG
Sbjct: 654 GKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPE-GGKGAAGP 712
Query: 771 SSFQQSNSSGTYGPQ--------MSQYGPQGNYSRP--PAYSGVPS----ASYSGP--GP 814
++GT G Q + GP+G+ P P GVP +GP P
Sbjct: 713 PG--PPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPP 770
Query: 815 GMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG 872
G ++ G P P A P G G P P P +PG Q G PG
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGF----PGAPG--QNGEPG 822
Score = 77.4 bits (189), Expect = 1e-13
Identities = 110/363 (30%), Positives = 127/363 (34%), Gaps = 43/363 (11%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAG--GQADPPGPPLLSKPGDEDDAPPKMGEP-A 138
L G G PGP P KD G G PG P +S P + P + G P A
Sbjct: 880 LPGPPGSNGNPGPP--GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937
Query: 139 GGRYEHPG-LGALG-TQQPPVAVPGGGGGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFD 195
G PG LG G T +A P G GP P G S P + G G GP
Sbjct: 938 QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGP--- 994
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGS--MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG 253
G Q PG+ + G PGS + S G + N PG PGA G G
Sbjct: 995 -PGPQGLPGLAGT-AGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPG--APGAPGHPG 1050
Query: 254 GGG--GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
G G G SG G G AG GA A + A G G G G++ G
Sbjct: 1051 PPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRG 1110
Query: 312 SPRQQGGGMMMGPGGGGAASLSKAAAGSAA----GGFQRFAGQNQHPSGATPTLNQLLTS 367
P G GP G A S AG G G + HP P
Sbjct: 1111 FPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGP-------- 1162
Query: 368 PSPM----MRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGA 423
P P R GS P + PP PP P G GG AAA G+G +
Sbjct: 1163 PGPRGNRGERGSEGS-PGHPGQPGPPGPPGAP-------GPCCGGVGAAAIAGIGGEKAG 1214
Query: 424 QYA 426
+A
Sbjct: 1215 GFA 1217
Score = 63.9 bits (154), Expect = 2e-09
Identities = 89/334 (26%), Positives = 115/334 (34%), Gaps = 59/334 (17%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------SKPGDE-----DDAP 131
G G PGP + + G + G+ PPGP L +PG + D P
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLP 1022
Query: 132 PKMGEPAG--GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG-GPGG 188
+ G P G R E+ GA G P P G GPA G A PA GP G
Sbjct: 1023 GRDGSPGGKGDRGENGSPGAPGAPGHPG--PPGPVGPAGKSGDRGESGPAGPAGAPGPAG 1080
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
G G Q P + AAG G H G+P + PGA
Sbjct: 1081 SRGA-----PGPQGPRGDKGETGERGAAGIKG--------HRGFPGN----------PGA 1117
Query: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
G G G G G G AG G + + G G G G+ G
Sbjct: 1118 PGSPGPAGQ----QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERG 1173
Query: 309 VLSSPRQQGGGMMMGP--------GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
SP G GP GG GAA+++ G AGGF + G P
Sbjct: 1174 SEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIA-GIGGEKAGGFAPYYG--DEPMDFKIN 1230
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
++++TS ++S G SP P++
Sbjct: 1231 TDEIMTS----LKSVNGQIESLISPDGSRKNPAR 1260
Score = 59.7 bits (143), Expect = 3e-08
Identities = 95/400 (23%), Positives = 127/400 (31%), Gaps = 79/400 (19%)
Query: 560 PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 619
PQPP P + P Q P+ D G R+ P PG+P P S
Sbjct: 89 PQPPTAPTR----PPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPG----------SPGS 134
Query: 620 LPDLSGSIDDLPTGTE--------ATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 671
P G + PTG + + S V+ G G PA P P P S
Sbjct: 135 -PGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPG----PAGPP-GPPGPPGTS 188
Query: 672 SIPGGP-SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS--SHPALSQSP- 727
PG P SP G P ++GP P PG+ P P G ES P P
Sbjct: 189 GHPGSPGSPGYQGPP--GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPG 246
Query: 728 ------------MPQERGFMAGTQRNPQMAQYG----------PQQTGP--SMSPHPSPG 763
P +G RN + + G P + G M P +PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306
Query: 764 GQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISAN 821
+ G+ + + Q GP G PP +G P + + GP +N
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPG----PPGTAGFPGSPGAKGEVGPAGSPGSN 362
Query: 822 NQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-------MG 874
+G P G AG Q P P ++ M G PG G
Sbjct: 363 GAPGQRGEPGPQG--------HAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 875 PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 914
PP P A + N A+ G ++G+
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454
Score = 57.0 bits (136), Expect = 2e-07
Identities = 66/226 (29%), Positives = 79/226 (34%), Gaps = 28/226 (12%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP-PLLSKPGDEDDAPPKMGEP 137
N G G PG ++ ++G A G PPGP K GD ++ P P
Sbjct: 1015 NPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGP--AGP 1072
Query: 138 AGGRYEHPGLGALGTQQP-PVAVPGGGGGPAAVPEFNNYYGS-AAPASGGPGGRAGPCFD 195
AG GA G Q P G G A + + G+ AP S GP G
Sbjct: 1073 AGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAG------- 1125
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ-CNHYPGYSRPGAGGGGGG 254
Q G SPG AG G + P G P + +PG P G G
Sbjct: 1126 QQGAIGSPG----------PAGPRGPVGP-----SGPPGKDGTSGHPGPIGPPGPRGNRG 1170
Query: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
G G G G G G GA AAA A GG GG+
Sbjct: 1171 ERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGF 1216
Score = 55.5 bits (132), Expect = 6e-07
Identities = 63/223 (28%), Positives = 70/223 (31%), Gaps = 38/223 (17%)
Query: 80 NSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAG 139
N GA G PGP G + D G A P G P P AP G P G
Sbjct: 1037 NGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAP---GPAGSRGAPGPQG-PRG 1092
Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
+ E GA G + PG G P + +P GP G GP
Sbjct: 1093 DKGETGERGAAGIKGHR-GFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGP------- 1144
Query: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
PG +G PG + P PG P G G G
Sbjct: 1145 SGPPG-------KDGTSGHPGPIGP----------------PG---PRGNRGERGSEGSP 1178
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
G G G G GA G G V AAA A GG Y G
Sbjct: 1179 GHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAPYYG 1221
Score = 33.9 bits (76), Expect = 1.8
Identities = 37/129 (28%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG 135
I + G G PGP +Q G + G P GPP K G P +G
Sbjct: 1105 IKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPP--GKDGTSGH-PGPIG 1161
Query: 136 EPA--GGRYEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGP 192
P G R E G+ G QP P G GP G A A G GG
Sbjct: 1162 PPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCC-------GGVGAAAIAGIGGEKAG 1214
Query: 193 CFDQHGGQQ 201
F + G +
Sbjct: 1215 GFAPYYGDE 1223
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 113 bits (283), Expect = 2e-24
Identities = 238/995 (23%), Positives = 320/995 (32%), Gaps = 151/995 (15%)
Query: 71 QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP------------PGP 118
Q+ P + +G G PQ GP EQ G D G P PGP
Sbjct: 105 QKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP 163
Query: 119 PLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV--PGGGGGPAAVPE 171
P PG PP +G + AGG E G LG Q P+ P G GPA P
Sbjct: 164 P--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 219
Query: 172 FNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMMHSASAAAAGAPG 220
+ G+ P GP G GP D G+ A G PG
Sbjct: 220 PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPG 279
Query: 221 SMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--------GGSGGGGGGGGA 271
+ P H GYP PG G G G G G G G G A
Sbjct: 280 TPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPA 338
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV-----------LSSPRQQGG-- 318
GA GA A G GG G+ G+ G PR + G
Sbjct: 339 GAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTP 398
Query: 319 ------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGATPTLNQLLTSPSP 370
G PG G +A G F G P GAT L + P
Sbjct: 399 GSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEP 458
Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMGLGKDMGAQYAAA 428
+ + G P P+ PQ AG G + G+G G + A
Sbjct: 459 GIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPG 513
Query: 429 SPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG----MGSNPHSQPQ- 482
+ + + P +PG GP+ + +G+ DP P L G G + PQ
Sbjct: 514 NRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQG 573
Query: 483 ----QSSPYPGGSYGPPGPQ--RYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
+P G GPPGPQ R G+ G PG P + +P
Sbjct: 574 KVGPSGAPGEDGRPGPPGPQGARGQPGVMG-FPGPKGANGEPGKAGEKGLPGAPGLRGLP 632
Query: 537 PQYGQQGVSG-------YCQQGQQ-----PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ 584
+ G+ G +G ++G+Q + P PP P + + + P +
Sbjct: 633 GKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEG----GKPGDQGVPGE 688
Query: 585 DMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAV 642
+ G R + P G P + L + P LP G+ D P G S
Sbjct: 689 AGAPGLVGPRGERGFPGERGSPGAQGL-----QGPRGLPGTPGT--DGPKGA----SGPA 737
Query: 643 SASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR--SGPISPAS 700
G+ G Q P + + A P G P G+P G + R +GPI P
Sbjct: 738 GPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVG-EKGPEGAP-GKDGGRGLTGPIGPPG 795
Query: 701 IPGSQ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP 754
G+ PP P GS + ++ P GF + Q G Q
Sbjct: 796 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 855
Query: 755 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGP 814
+PG Q +G Q +G GP+ ++ G QG PP +G P A+ P
Sbjct: 856 QKGDAGAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGATGFPGAAGRVGPP 908
Query: 815 GMGISANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGM 873
G +N GP P G P G +G R G P+ P ++G PG
Sbjct: 909 G----SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPAGP-PGEKGEPGD 961
Query: 874 GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLM 932
P + A Q + FPG+ P +P +
Sbjct: 962 DGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPSGEPGKQGAPGAS 1013
Query: 933 NTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP 967
+ PP + P + A G SPG P
Sbjct: 1014 GDRGPPGPVGPPGLTGPAGEPGREG--SPGADGPP 1046
Score = 108 bits (271), Expect = 4e-23
Identities = 179/653 (27%), Positives = 212/653 (32%), Gaps = 103/653 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
GA G GP E+ + G S G PPGPP KPGD+ P + G P G
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 697
Query: 141 RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
R E G G+ PG G GP +P P + GP G +GP G
Sbjct: 698 RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 741
Query: 199 GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Q PG+ M AA AG G D + EG P G + P G G
Sbjct: 742 AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 799
Query: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
G G G G G AGA GA A AG G G G+ G
Sbjct: 800 NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 859
Query: 316 QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
G GP G G + A G Q G P A
Sbjct: 860 AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 902
Query: 375 YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
G P S+ + PP P P + GA G AG + G Q A P
Sbjct: 903 -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 956
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
P+ + G PGP Q G P P L G P +Q +P
Sbjct: 957 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 1013
Query: 490 GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQ 549
G GPPGP P G+ G P G + D P + G GV G
Sbjct: 1014 GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGP-----------PGRDGAAGVKGDRG 1059
Query: 550 QGQQPYYSQQPQPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP----- 601
+ P PP P A Q + Q M G G R Q P P
Sbjct: 1060 ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1119
Query: 602 --GKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQ 659
G+P L + L L G P G S ASG G + P
Sbjct: 1120 EAGEPGERGLK--GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG- 1167
Query: 660 SPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 712
P P + IPG P+G P + RSG PA PG+ PP PPG
Sbjct: 1168 -PVGPSGKDGANGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1212
Score = 106 bits (264), Expect = 3e-22
Identities = 214/848 (25%), Positives = 271/848 (31%), Gaps = 130/848 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG GP E+ G G A P G P + G A PK GR
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP--GERGPSGLAGPKGANGDPGRPG 552
Query: 144 HPGL-GALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAP--ASGGPG------------ 187
PGL GA G T +P A P G GP+ P + G P A G PG
Sbjct: 553 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG 612
Query: 188 --GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPL-QNSHEGYPN-SQCNHYP 241
G+AG + G +PG+ + AAG PG P + +G P S P
Sbjct: 613 EPGKAG----EKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 668
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
G P GG G G G +G G G G G + A G G G
Sbjct: 669 GPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD 728
Query: 302 GSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
G G P QG + G PG GAA ++ G + G G
Sbjct: 729 GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-- 786
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
L + P P G+ E PP P ++ A G AG
Sbjct: 787 LTGPIGPPGP-----AGANGE-KGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA---- 836
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
G A P Q + G PGP P P + P+ G+
Sbjct: 837 -GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK----GARGAQG 891
Query: 481 PQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQDSGDATWKETFWLMP 536
P ++ +PG G GPPG P G G P +G P+ + DSG P
Sbjct: 892 PPGATGFPGAAGRVGPPGSNGNP-GPPG--PPGPSGKDGPKGARGDSG-----------P 937
Query: 537 P----QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG 592
P + G QG +G + +P P PP Q L Q P Q + G+
Sbjct: 938 PGRAGEPGLQGPAGPPGEKGEPG-DDGPSGAEGPPGPQGLAGQRGIVGLPGQ-RGERGFP 995
Query: 593 TRSQPPLAPGKPNHEDLNLIQ-QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
P PGK + + P P L+G + G+ +
Sbjct: 996 GLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVK 1055
Query: 652 GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
GD+ P S P GP+ Q GP PA G Q P P
Sbjct: 1056 GDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPR 1115
Query: 712 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
G + E+ P ERG GP P P G A
Sbjct: 1116 GDKGEAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA--- 1153
Query: 772 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
SG GP GP+G PGP +G S + +G GP
Sbjct: 1154 -------SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPI 1184
Query: 831 QPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQ 885
P G P GR G P PG P PG+ G+GP P P +A
Sbjct: 1185 GPPG--PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1242
Query: 886 EAAAAVMQ 893
+AA + Q
Sbjct: 1243 QAAGGLRQ 1250
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 113 bits (282), Expect = 2e-24
Identities = 243/968 (25%), Positives = 310/968 (32%), Gaps = 182/968 (18%)
Query: 88 GAPQP----GPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
GAP P GP E + G S G PPGPP K GD+ +A G+P
Sbjct: 194 GAPGPQGFQGPPGEPGEPGA---SGPMGPRGPPGPP--GKNGDDGEA----GKP------ 238
Query: 144 HPGLGALGTQQPPVAVPGGG-GGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQ 201
G G + PP G G A +P + G S + G G AGP G
Sbjct: 239 ----GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGP----KGEPG 290
Query: 202 SPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGG--GGGGGGGGG 259
SPG GAPG M P G P + RPGA G G G G
Sbjct: 291 SPGEN----------GAPGQMGP-----RGLPGER-------GRPGAPGPAGARGNDGAT 328
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
G +G G G AG G A A G G G GS GV P G
Sbjct: 329 GAAGPPGPTGPAGPPG---------FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379
Query: 320 MMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--- 376
GP G A A G A G AG P P+ Q P + G
Sbjct: 380 GAAGPAGNPGADGQPGAKG--ANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
Query: 377 --GSYPEYSSPSAPPPPPSQ-PQSQAAAAG-AAAGGQQAAAGM-GLGKDMGAQYAAASPA 431
GS + + P P Q P A G A G+ G+ G + G + P
Sbjct: 438 APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Query: 432 WAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGS 491
PA G+PGP G P RP G+ SP P G
Sbjct: 498 ADGVAGPKGPAGERGSPGPA-----GPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGK 552
Query: 492 YGPPGPQRYPIGIQGR-----TPGA--MAG-MQYPQQQDSGDATWKETFWLMPPQYGQQG 543
GPPG P G GR PGA AG M +P + + P + G++G
Sbjct: 553 TGPPG----PAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGE---------PGKAGERG 599
Query: 544 VSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK 603
V G G + + P P+ + P +G + PP GK
Sbjct: 600 VPG--PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK 657
Query: 604 PNHEDLNLIQQERPSSL--PDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN----- 656
P +Q P L P SG+ + E + +G + G N
Sbjct: 658 PG-------EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKG 710
Query: 657 PAQSPFSP--HASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ--------- 705
A +P +P +P L +PG + + P G ++ +GP PG
Sbjct: 711 DAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG-DRGDAGPKGADGSPGKDGVRGLTGPI 769
Query: 706 MPPQP---PGSQSESS-SHPA--LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH 759
PP P PG + ES S PA P +RG + GP
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRG---------EPGPPGPAGFAGPPGAD 820
Query: 760 PSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG----PGP 814
PG + G + + + G GP GP GN P A SA G PG
Sbjct: 821 GQPGAKGEPGDAGAKGDAGPPGPAGP-AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGA 879
Query: 815 GMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT--PSSPG-MSQQGGP 871
+ GP P G P G+ G + P P PG ++G P
Sbjct: 880 AGRVGPPGPSGNAGPPGPPG--PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 937
Query: 872 GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSS 930
G P + A Q + FPG+ P +P S
Sbjct: 938 GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL--------PGPSGEPGKQGPSG 989
Query: 931 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSS 990
+ PP M P GLA PGES EG P E +
Sbjct: 990 ASGERGPPGPMGPP---------GLAG--PPGES----------GREGAPGAEGSPGRDG 1028
Query: 991 SSTTTGEK 998
S G++
Sbjct: 1029 SPGAKGDR 1036
Score = 108 bits (270), Expect = 6e-23
Identities = 222/885 (25%), Positives = 276/885 (31%), Gaps = 164/885 (18%)
Query: 73 QHPISNNNSLGGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPGPP----------- 119
Q P G +G P+ PGP + G A G+ PPGP
Sbjct: 202 QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL 261
Query: 120 -----------LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAA 168
L GD A PK GEP PG Q P +PG G P A
Sbjct: 262 PGMKGHRGFSGLDGAKGDAGPAGPK-GEPGS-----PGENGAPGQMGPRGLPGERGRPGA 315
Query: 169 VPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNS 228
A + GP G GP G PG A GA G P
Sbjct: 316 PGPAGARGNDGATGAAGPPGPTGPA----GPPGFPG----------AVGAKGEAGPQGPR 361
Query: 229 HEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAA 288
P G P G G G G G G G GA G A
Sbjct: 362 GSEGPQG----VRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGP 417
Query: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
+ G GG G G+S G S G GP G + G A +R A
Sbjct: 418 SGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVG------VQGPPGPAGEEGKRGA 471
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAAAAGAAA 406
P+G L P P R GS +P + P P + S A +
Sbjct: 472 RGEPGPTG--------LPGP-PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 522
Query: 407 GGQQAAAG-MGLGKDMGAQYAAASPAWAAAQQRSHPAMS---PGTPGPTMGRSQGSPMDP 462
G+ G GL G + SP PA PG PGP R Q
Sbjct: 523 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG---- 578
Query: 463 MVMKRPQLYGMGSNPHSQPQQSSPYP------------GGSYGPPGPQRYPIGIQG-RTP 509
VM P G P ++ P P G+ GPPGP P G +G + P
Sbjct: 579 -VMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG-PAGERGEQGP 636
Query: 510 GAMAGMQ-YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYS----QQPQPPH 564
G Q P K +P G G SG +G++ + Q P P
Sbjct: 637 AGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG--ARGERGFPGERGVQGPPGPA 694
Query: 565 LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQER-PSSLPDL 623
P A P +G + P APG L + ER + LP
Sbjct: 695 GPRGANGAP-------------GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGP 741
Query: 624 SGSIDDL-PTGTEAT--------LSSAVSASGSTSSQGDQ-----SNPAQSPFSPHASPH 669
G D P G + + L+ + G + GD+ S PA P +P
Sbjct: 742 KGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPA-GPTGARGAPG 800
Query: 670 LSSIPGGPSPSPVGSPVGSN--------------QSRSGPISPASIPGSQMPPQPPGSQS 715
PG P P+ P G++ + +GP PA G PP P G+
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG---PPGPIGNVG 857
Query: 716 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
+ A + P GF R GP GPS + P PG AG
Sbjct: 858 APGAKGARGSAGPPGATGFPGAAGR------VGP--PGPSGNAGP-PGPPGPAG------ 902
Query: 776 SNSSGTYGPQMSQYGPQGNYSR--PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 833
G GP+ + GP G PP G P+ PG A QG +
Sbjct: 903 --KEGGKGPR-GETGPAGRPGEVGPPGPPG-PAGEKGSPGADGPAGAPGTPGPQGIAGQR 958
Query: 834 GAVPL-GRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-MGPP 876
G V L G+ G P P S ++G PG MGPP
Sbjct: 959 GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003
Score = 104 bits (259), Expect = 1e-21
Identities = 183/684 (26%), Positives = 218/684 (31%), Gaps = 117/684 (17%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEP--AGG 140
GA G GP E+ + G A G P GPP KPG E P +G P +G
Sbjct: 617 GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPG-EQGVPGDLGAPGPSGA 675
Query: 141 RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
R E G G Q PP P G G P + G A A G PG + P G Q
Sbjct: 676 RGERGFPGERGVQGPPG--PAGPRGANGAPGNDGAKGDAG-APGAPGSQGAP-----GLQ 727
Query: 201 QSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG 256
PG AAG PG D +G P + G + P G G
Sbjct: 728 GMPG-------ERGAAGLPGPKGDRGDAGPKGADGSPGK--DGVRGLTGPIGPPGPAGAP 778
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVA------AAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
G G SG G G GA GA A A A G G G G + G
Sbjct: 779 GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDA 838
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT--PTLNQLLTSP 368
P G GP G A +K A GSA P GAT P + P
Sbjct: 839 GPPGPAGPAGPPGPIGNVGAPGAKGARGSAG------------PPGATGFPGAAGRVGPP 886
Query: 369 SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
P S +A PP P P + G G+ AG +
Sbjct: 887 GP-------------SGNAGPPGPPGPAGKEGGKGPR--GETGPAGRP------GEVGPP 925
Query: 429 SPAWAAAQQRSH----PAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQ 480
P A ++ S PA +PGTPGP Q G P P L G P Q
Sbjct: 926 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQ 985
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
+ G GPPGP P G+ G PG P + S P + G
Sbjct: 986 GPSGA---SGERGPPGPMGPP-GLAG-PPGESGREGAPGAEGS------------PGRDG 1028
Query: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--P 598
G G + P PP A P P + G + P P
Sbjct: 1029 SPGAKG----------DRGETGPAGPPGAPGAPGAPG----PVGPAGKSGDRGETGPAGP 1074
Query: 599 LAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS-NP 657
P P + P +G D S G S G+Q +
Sbjct: 1075 AGPVGPVGAR-GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG 1133
Query: 658 AQSPFSPHASPHLSSIPGGPS----PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGS 713
A P P P + PG P P+G P + R+G P PG PP PPG
Sbjct: 1134 ASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPP--GPRGRTGDAGPVGPPGPPGPPGPPGP 1191
Query: 714 QSESSSHPALSQSPMPQERGFMAG 737
S L Q PQE+ G
Sbjct: 1192 PSAGFDFSFLPQP--PQEKAHDGG 1213
Score = 90.5 bits (223), Expect = 2e-17
Identities = 183/728 (25%), Positives = 224/728 (30%), Gaps = 147/728 (20%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-------LLSKPGDEDDA--PPKM 134
G G PGPD + G A G+ PPGPP ++ PG + A P K
Sbjct: 539 GLTGSPGSPGPDGKTGPPGPAGQD---GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKA 595
Query: 135 GE-----PAGGRYEHPGLGALGTQQPP----VAVPGGGGGPAAVPEFNNYYGSAAPASGG 185
GE P G G G Q PP A G GPA P F G A G
Sbjct: 596 GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPA-----G 650
Query: 186 PGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
P G AG + G Q PG GAPG G+P + G
Sbjct: 651 PPGEAG----KPGEQGVPG----------DLGAPGPSGA--RGERGFPGER-----GVQG 689
Query: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
P G G G G G G G GA G+ AAG G G G +
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749
Query: 306 GYGVLSSPRQQGGGMMMGPGG-----GGAASLSKAAAGSAAG--GFQRFAGQNQHPSGAT 358
G SP + G + GP G G ++ AG G + G P
Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMG 416
P + G + A PP P+ P G A G + A G
Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAG 869
Query: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
G AA + P PG G G+ P RP G
Sbjct: 870 PPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPA--GRPGEVGPPGP 927
Query: 477 PHSQPQQSSPY---PGGSYGPPGPQ-----RYPIGIQG-RTPGAMAGMQYPQQQDSGDAT 527
P ++ SP P G+ G PGPQ R +G+ G R G+ P SG+
Sbjct: 928 PGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP----SGE-- 981
Query: 528 WKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY------Q 581
P + G G SG + P P PP P +S +
Sbjct: 982 --------PGKQGPSGASG----------ERGPPGPMGPPGLAGPPGESGREGAPGAEGS 1023
Query: 582 PQQDMSQEGYGTRSQ-----PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL----PT 632
P +D S G R + PP APG P P SG + P
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPG--------PVGPAGKSGDRGETGPAGPA 1075
Query: 633 GTEATLSSAVSAS--------GSTSSQGDQS-----------NPAQSPFSP-HASPHLSS 672
G + + A G T QGD+ P P SP P +S
Sbjct: 1076 GPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGAS 1135
Query: 673 IPGGPS--PSPVGSP----VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS 726
P GP P G+P + GP P G P PPG P
Sbjct: 1136 GPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGP-------PGPPGP 1188
Query: 727 PMPQERGF 734
P P GF
Sbjct: 1189 PGPPSAGF 1196
Score = 85.5 bits (210), Expect = 5e-16
Identities = 112/426 (26%), Positives = 135/426 (31%), Gaps = 36/426 (8%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRY 142
G G A PG D + G D+ A G A PPGP PG + + A G
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA 868
Query: 143 EHPGL----GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAP-ASGGPGGRAGPCFDQH 197
PG GA G PP P G GP P G P GP GR G +
Sbjct: 869 GPPGATGFPGAAGRVGPPG--PSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPG----EV 922
Query: 198 GGQQSPGMGMMHSASAA--AAGAPGSMDPL----QNSHEGYPNSQCNH-YPGYSRPGAGG 250
G PG + A AGAPG+ P Q G P + +PG P
Sbjct: 923 GPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEP 982
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
G G G G G G G G G + A A + G G G G G
Sbjct: 983 GKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPA 1042
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
P G GP G S + G A + P+G +
Sbjct: 1043 GPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQ 1102
Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM--GLGKD--MGAQYA 426
R G + +S PP PP P Q + + G + G GKD G
Sbjct: 1103 GDRGIKG-HRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161
Query: 427 AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
P + P PG PGP G P P G + QP Q
Sbjct: 1162 IGPPGPRGRTGDAGPVGPPGPPGP-----PGPPGPPSA-------GFDFSFLPQPPQEKA 1209
Query: 487 YPGGSY 492
+ GG Y
Sbjct: 1210 HDGGRY 1215
Score = 65.9 bits (159), Expect = 4e-10
Identities = 167/672 (24%), Positives = 218/672 (32%), Gaps = 122/672 (18%)
Query: 373 RSYGG-SYPEYSSPSAP---PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
+S GG S P PS P P PP P Q G+ A+G MG +
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG-----PMGPR---G 221
Query: 429 SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
P A PG PG +G P P G+ +
Sbjct: 222 PPGPPGKNGDDGEAGKPGRPG-----ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGA 276
Query: 489 GGSYGPPGPQRYPIGIQGR--TPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSG 546
G GP GP+ P G G PG M P ++ A P G +G G
Sbjct: 277 KGDAGPAGPKGEP-GSPGENGAPGQMGPRGLPGERGRPGA---------PGPAGARGNDG 326
Query: 547 YCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEG-YGTRSQPPLAPGKPN 605
P + PP P ++ PQ EG G R + PG P
Sbjct: 327 ATGAAGPPGPTGPAGPPGFPGAV-----GAKGEAGPQGPRGSEGPQGVRGE----PGPPG 377
Query: 606 HEDLNLIQQERPSSLPDLSGS--IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS 663
P+ +G+ D P A + ++ + S P Q P
Sbjct: 378 -----------PAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP-QGPGG 425
Query: 664 PHASPHLSSIPGGP----------SPSPVG-----SPVGSNQSRS--GPISPASIPGSQM 706
P S PG P P PVG P G R G P +PG
Sbjct: 426 PPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPG--- 482
Query: 707 PPQPPGSQSESSSHPALSQSPMPQERGF-----MAGTQRNPQMAQYGPQQTGPSMSPHPS 761
PPG + P RGF +AG + P + P GP SP +
Sbjct: 483 ---PPGERGG------------PGSRGFPGADGVAG-PKGPAGERGSPGPAGPKGSPGEA 526
Query: 762 PGGQMHAGISSFQ-QSNSSGTYGP--QMSQYGPQGNYSRPPAYSGVPSASYSG-----PG 813
G AG+ + + S G+ GP + GP G R P G P A PG
Sbjct: 527 -GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGR-PGPPGPPGARGQAGVMGFPG 584
Query: 814 PGMGISANNQMHGQGPSQPCGAV-PLGRMPSAGMQNRPFP----GNMSSMTPS-SPGMSQ 867
P + +G P GAV P G+ AG Q P P G P+ SPG
Sbjct: 585 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF-- 642
Query: 868 QGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNN 927
QG PG P + ++ + A S + FPG + G+ P + P
Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPG--ERGVQGPPGP-AGPRGA 699
Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGE---SKLPLPLKADGKEEGTPQPES 984
+ + N A + AP S A GL M PGE + LP P K D + G +
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAP-GLQGM--PGERGAAGLPGP-KGDRGDAGPKGADG 755
Query: 985 KSKKSSSSTTTG 996
K TG
Sbjct: 756 SPGKDGVRGLTG 767
Score = 49.3 bits (116), Expect = 4e-05
Identities = 137/571 (23%), Positives = 179/571 (31%), Gaps = 115/571 (20%)
Query: 482 QQSSPYPGGSYGPPGP----------------QRYPIGIQGRTPGAMAGMQYPQQQDSGD 525
Q P P G GPPGP ++ GI PG M
Sbjct: 137 QPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGIS--VPGPMGPSGPRGLPGPPG 194
Query: 526 ATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD 585
A + F P + G+ G SG P+ P PP ++ + +P +
Sbjct: 195 APGPQGFQGPPGEPGEPGASG----------PMGPRGPPGPPGKNGDDGEAGKPGRPGER 244
Query: 586 MSQEGYGTRSQPPLA--PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS--- 640
G R P A PG H S L G D P G + S
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGF--------SGLDGAKG--DAGPAGPKGEPGSPGE 294
Query: 641 --AVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPGGPSPS-PVGSP-----VGSN-- 689
A G G++ P A P + + G P P+ P G P VG+
Sbjct: 295 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGE 354
Query: 690 ---QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNP-Q 743
Q G P + G PP P G+ + + A Q G +AG P
Sbjct: 355 AGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGA 414
Query: 744 MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ--YGPQGNYSR---- 797
GPQ GP P P S + + G GP Q GP G +
Sbjct: 415 RGPSGPQ--GPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGAR 472
Query: 798 -PPAYSGVPSASYSGPGPG-MGISANNQMHG-QGPSQPCGAV-PLGRMPSAGMQNRP--- 850
P +G+P GPG G + + G +GP+ G+ P G S G RP
Sbjct: 473 GEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEA 532
Query: 851 -FPGNMS-SMTPSSPGMSQQGGP--------GMGPPMPTVNRKAQEAAAAVM------QA 894
PG + +P SPG + GP GPP P R A VM A
Sbjct: 533 GLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGAR----GQAGVMGFPGPKGA 588
Query: 895 AANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 954
A ++ + PG P + Q PP PA G
Sbjct: 589 AGEPGKAGERGVPG----------PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 638
Query: 955 LADMMSPGESKLPLPLKADGK-----EEGTP 980
SPG LP P G+ E+G P
Sbjct: 639 -----SPGFQGLPGPAGPPGEAGKPGEQGVP 664
Score = 47.0 bits (110), Expect = 2e-04
Identities = 60/203 (29%), Positives = 66/203 (32%), Gaps = 35/203 (17%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G + GP + G G A PPG + AP G P GR
Sbjct: 975 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPG------ESGREGAPGAEGSP--GR 1026
Query: 142 YEHPGL----GALGTQQPPVA--VPGGGG--GPAAVPEFNNYYGSAAPASG-GPGGRAGP 192
PG G G PP A PG G GPA G A PA GP G GP
Sbjct: 1027 DGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGP 1086
Query: 193 CFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGG 252
G Q P + G G H G+ Q G P G
Sbjct: 1087 -----AGPQGPRGDKGETGEQGDRGIKG--------HRGFSGLQ-----GPPGPPGSPGE 1128
Query: 253 GGGGGGGGGSGGGGGGGGAGAGG 275
G G G +G G G AGA G
Sbjct: 1129 QGPSGASGPAGPRGPPGSAGAPG 1151
Score = 37.7 bits (86), Expect = 0.12
Identities = 67/251 (26%), Positives = 80/251 (31%), Gaps = 50/251 (19%)
Query: 674 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
P GP P G P R G +PG PP PPG P L + PQ
Sbjct: 119 PRGPR-GPAGPP-----GRDGIPGQPGLPGPPGPPGPPGP-------PGLGGNFAPQ--- 162
Query: 734 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQ----QSNSSGTYGPQMSQY 789
G P GPS P PG G FQ + G GP M
Sbjct: 163 LSYGYDEKSTGGISVPGPMGPS-GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGP-MGPR 220
Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPL-GRMPSAGMQ- 847
GP G PP +G + PG +GP P GA L G GM+
Sbjct: 221 GPPG----PPGKNGDDGEAGKPGRPG----------ERGPPGPQGARGLPGTAGLPGMKG 266
Query: 848 NRPFPGNMSSM----------TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAAN 897
+R F G + P SPG + G PG P + + A A N
Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPG--ENGAPGQMGPRGLPGERGRPGAPGPAGARGN 324
Query: 898 SAQSRQGSFPG 908
+ PG
Sbjct: 325 DGATGAAGPPG 335
Score = 35.4 bits (80), Expect = 0.62
Identities = 75/331 (22%), Positives = 97/331 (29%), Gaps = 36/331 (10%)
Query: 1123 PSPANSGSLQGPQTPQ-STGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1181
P P GP+ S G + + + G + PP PA P + G +
Sbjct: 739 PGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGA 798
Query: 1182 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1241
D + P P G + P P + G + G P G
Sbjct: 799 PGDRGE----------PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG 848
Query: 1242 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1301
P + ++ GA + G FP A R P G G P G P
Sbjct: 849 --PPGPIGNVGAPGAKGARGSAGPPGATGFPGAAG---RVGPPGPS--GNAGPPGPPGPA 901
Query: 1302 GHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG--------GSY 1353
G + G P+ G GPP + G G
Sbjct: 902 GKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV 961
Query: 1354 SGPDRRPIQG--QYPYPYSRERMQGPGQIQTHGIPPQMMG-----GPLQSSSSEG-PQQN 1405
P +R +G P P QGP PP MG GP S EG P
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE 1021
Query: 1406 MWAARNDMPYPYQNR--QGPGGPTQAPPYPG 1434
R+ P +R GP GP AP PG
Sbjct: 1022 GSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052
Score = 35.0 bits (79), Expect = 0.81
Identities = 88/379 (23%), Positives = 121/379 (31%), Gaps = 68/379 (17%)
Query: 1099 ERGEEPPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQST----------------G 1141
ERG PP + Q PP PA +G Q P + G
Sbjct: 597 ERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG 656
Query: 1142 SNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP--FSDVSDSSFPKRNSMTPN 1199
VPGDL P P+ + P + G P + + K ++ P
Sbjct: 657 KPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPG 716
Query: 1200 APYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN----QS 1255
AP QG P + G MP E G + G + P G ++ +
Sbjct: 717 APGSQG--APGLQG-MPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPG 773
Query: 1256 PSGAMSNLGMGQRQQFPYGAS--YDRRHEPYGQQYPGQGPPSG--QPPYGGHQPGLYPQQ 1311
P+GA + G + P G + R P + PG P+G PP QPG +
Sbjct: 774 PAGAPGDKG----ESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 1312 PNYKRHMD-------GMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQ 1364
+ D G GPP G + N+ + GS P G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPP-----GPIGNVGAPGAKGAR-----GSAGPP------GA 873
Query: 1365 YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARN-------DMPYPY 1417
+P + R+ PG G P GP +GP+ A P P
Sbjct: 874 TGFPGAAGRVGPPGPSGNAG--PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931
Query: 1418 QNRQGPG--GPTQAPPYPG 1434
+ PG GP AP PG
Sbjct: 932 GEKGSPGADGPAGAPGTPG 950
Score = 33.5 bits (75), Expect = 2.4
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 70 QQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE- 127
+Q I + G G PG EQ G A G A P GPP PG +
Sbjct: 1101 EQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG------ASGPAGPRGPPGSAGAPGKDG 1154
Query: 128 -DDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFN 173
+ P +G P G R G +G PP PG G P+A +F+
Sbjct: 1155 LNGLPGPIG-PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFS 1199
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 113 bits (282), Expect = 2e-24
Identities = 208/827 (25%), Positives = 269/827 (32%), Gaps = 128/827 (15%)
Query: 77 SNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE-----DDA 130
S N G+ G PGP E+ + G + G A PPGPP L PG D
Sbjct: 357 SGNKGEPGSAGPQGPPGPSGEEGKRG---PNGEAGSAGPPGPPGLRGSPGSRGLPGADGR 413
Query: 131 PPKMGEPA----------------GGRYEHPGL-GALGTQQPPVAV-PGGGGGPAAVPEF 172
MG P GR PGL G G P + P G GP +P
Sbjct: 414 AGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGI 473
Query: 173 NNYYGSAAPAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHE 230
+ G PA G PG P G H+ A A GAPG N +
Sbjct: 474 DGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDG--NNGAQ 531
Query: 231 GYPNSQ----------------CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
G P Q PG S P G G G G G G G G
Sbjct: 532 GPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGER 591
Query: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLS 333
G + AA + G G G G+ GV+ + G G PG GAA +
Sbjct: 592 GPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIP 651
Query: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP-- 391
G + G N GA + +P P + + P+ P P
Sbjct: 652 GGKGEKGEPGLRGEIG-NPGRDGARGAPG-AVGAPGPAGATGDRGEAGAAGPAGPAGPRG 709
Query: 392 ---------PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
P+ P A AGAA GQ A G K + P + PA
Sbjct: 710 SPGERGEVGPAGPNGFAGPAGAA--GQPGAKGERGAKGPKGENGVVGPTGPVG--AAGPA 765
Query: 443 MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI 502
G PGP R G P GM P + + P P G GPPGP
Sbjct: 766 GPNGPPGPAGSRGDGGPP-----------GMTGFPGAAGRTGPPGPSGISGPPGPP---- 810
Query: 503 GIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQY-GQQGVSGYCQQGQQPYYSQQPQ 561
P G++ P+ E + PP + G++G SG P + PQ
Sbjct: 811 -----GPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPP-GTPGPQ 864
Query: 562 PPHLPPQAQYLPSQSQQRYQP--QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 619
P LP +R P + + G + PP A G P
Sbjct: 865 GLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPG-----------AVG 913
Query: 620 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 679
P ++G+ EA G G + + + + P G P P
Sbjct: 914 SPGVNGA------PGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGP--VGAAGAPGP 965
Query: 680 -SPVGSPVGSNQSR-----SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
PVG P G + +R SGP+ PA G + P P G + + +P +G
Sbjct: 966 HGPVG-PAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKG 1024
Query: 734 FMAGTQRNPQMA-----QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
G Q P +A Q P GP+ P G AG ++ GT GP +
Sbjct: 1025 H-NGLQGLPGIAGHHGDQGAPGSVGPA-GPRGPAGPSGPAGKDG--RTGHPGTVGPAGIR 1080
Query: 789 YGPQGNY--SRPPAYSGVPS-ASYSGPGPGMGISANNQMHGQGPSQP 832
GPQG+ + PP G P SG G G + Q S P
Sbjct: 1081 -GPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAP 1126
Score = 99.8 bits (247), Expect = 3e-20
Identities = 208/905 (22%), Positives = 273/905 (30%), Gaps = 172/905 (19%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPG 146
G A GP E+ G G PPGPP PG PP +G +Y+ G
Sbjct: 33 GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPP--GPPG-----PPGLGGNFAAQYDGKG 85
Query: 147 LGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCFDQHGGQQS 202
+G LG + P G G A P + G A P GP G GP G
Sbjct: 86 VG-LGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP-----AGPPG 139
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
H G G + P G+P + PG+ G G G G
Sbjct: 140 KAGEDGHPGKPGRPGERGVVGP--QGARGFPGTP--GLPGFKGIRGHNGLDGLKGQPGAP 195
Query: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
G G G G G A G G G GS G + G
Sbjct: 196 GVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSA--- 252
Query: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
GP G A K G+ N P+G ++ P
Sbjct: 253 GPPGFPGAPGPKGEIGAVG---------NAGPAGPAGPRGEV-------------GLPGL 290
Query: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----------GLGKDMGAQYAAASPAW 432
S P PP P A A G A G+ G GA+ P
Sbjct: 291 SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGP 350
Query: 433 AAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPY-PGGS 491
A ++ S PG+ GP QG P P + + P GS
Sbjct: 351 AGSKGESGNKGEPGSAGP-----QGPP----------------GPSGEEGKRGPNGEAGS 389
Query: 492 YGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQG 551
GPPGP G++G +PG+ +P G+ GV G
Sbjct: 390 AGPPGPP----GLRG-SPGSRG---------------------LPGADGRAGVMG----- 418
Query: 552 QQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNL 611
PP ++ + R P D + G P PG P ++
Sbjct: 419 --------------PPGSRGASGPAGVR-GPNGDAGRPGEPGLMGPRGLPGSPG--NIGP 461
Query: 612 IQQERPSSLPDLSGSIDDL-PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 670
+E P LP + G + P G + G +G +P ++ HA L
Sbjct: 462 AGKEGPVGLPGIDGRPGPIGPAGARGEPGNI----GFPGPKGPTGDPGKNGDKGHAG--L 515
Query: 671 SSIPGGPSPSPVGSPVGSNQSRSGPISPASI---PGSQMPPQPPGSQSESSSHPALSQSP 727
+ G P P N GP P + G Q PP PPG Q +
Sbjct: 516 AGARGAPGPD-------GNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVG 568
Query: 728 MPQERGFMAGTQRNPQMAQYG-PQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
P ERG ++G P GP P PG AG + S G GP
Sbjct: 569 KPGERGL---------HGEFGLPGPAGPRGERGP-PGESGAAGPTG--PIGSRGPSGPP- 615
Query: 787 SQYGPQGNYSRPPAYSGVPSASYSGPG--PGMGISANNQMHGQGPSQPCGAVPLGRMPSA 844
GP GN P V +A SGP PG A G+G G G + +
Sbjct: 616 ---GPDGNKGEPGVVGAVGTAGPSGPSGLPGER-GAAGIPGGKGEKGEPGL--RGEIGNP 669
Query: 845 GMQN-RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQ 903
G R PG + + P+ + GP P R + V A N
Sbjct: 670 GRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPA 729
Query: 904 GSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG-LADMMSPG 962
G+ G + P + ++ P + PA N G D PG
Sbjct: 730 GAAGQPGAKGERGAKGP-----KGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784
Query: 963 ESKLP 967
+ P
Sbjct: 785 MTGFP 789
Score = 53.9 bits (128), Expect = 2e-06
Identities = 82/294 (27%), Positives = 101/294 (34%), Gaps = 62/294 (21%)
Query: 73 QHPISNNNSLGGAG--GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDA 130
Q P+ +G G G A + GP S G A PPG P P A
Sbjct: 825 QGPVGRTGEVGAVGPPGFAGEKGP------------SGEAGTAGPPGTP---GPQGLLGA 869
Query: 131 PPKMGEPAGGRYEH--PGLGALGTQQPPVAV---PGGGGGPAAV--PEFNNYYGSAA--- 180
P +G P G R E PG+ + P+ + PG G P AV P N G A
Sbjct: 870 PGILGLP-GSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928
Query: 181 -PASGGPGGRAGPCFDQHGGQQS-PGMGMMHSASAAAAGAPGSMDPLQ------NSHEGY 232
P + GP GR G H G++ PG + AAGAPG P+ N E
Sbjct: 929 NPGNDGPPGRDGQ--PGHKGERGYPG----NIGPVGAAGAPGPHGPVGPAGKHGNRGETG 982
Query: 233 PNSQCNHY--------------------PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
P+ PG P G G G G G G G G
Sbjct: 983 PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042
Query: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGG 326
A G+ A A + AG G G+ G+ G+ QG GP G
Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPG 1096
>gi|5453638 AT rich interactive domain 3B [Homo sapiens]
Length = 560
Score = 106 bits (264), Expect = 3e-22
Identities = 93/333 (27%), Positives = 155/333 (46%), Gaps = 41/333 (12%)
Query: 831 QPCGAVPLGRM----PSAGMQNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPMPTVNRKAQ 885
+P G+ PLG + P+A + GNM+S G + + G + +
Sbjct: 59 RPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDG----------DDEVA 108
Query: 886 EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAM 945
E A QAA+ ++ +A P PM+N L PP+
Sbjct: 109 EVAEKETQAASKYFHVQK-----------VARQDPRVAPMSNL--LPAPGLPPHGQQAKE 155
Query: 946 VNSSAASVGLADMMSPGESKLPLP--LKADGKEEGTPQPESKSKKSSSSTTTGEKITKVY 1003
++ AS + + G+ L LK +G + + + S K+Y
Sbjct: 156 DHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREIS-----RDFAKLY 210
Query: 1004 ELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKK 1063
EL +PERK ++D FM++RG+P++ +P + K+ LDL+ LY V E GGL ++ K
Sbjct: 211 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 270
Query: 1064 WRELATNLNVGTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQP 1122
WRE+ LN+ TS +SAA +L+ QY++YL+A+EC+ ++ P E+ + D ++ +
Sbjct: 271 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECE-KKALSSPAELQAAIDGNRR---EG 326
Query: 1123 PSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPP 1155
P+ S SL G +P + + + A P L PP
Sbjct: 327 RRPSYSSSLFG-YSPAAATAAAAAGAPALLSPP 358
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein [Homo
sapiens]
Length = 593
Score = 104 bits (260), Expect = 8e-22
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 954 GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
G+ ++ E P P G PQ + T E+ ++YEL +P+RK
Sbjct: 187 GVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDH---GDWTYEEQFKQLYELDGDPKRKE 243
Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
++D +FM++RG+PV+ +P + K+ LDLF LYV V E GGL +V K WRE+ LN+
Sbjct: 244 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303
Query: 1074 GTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQP--------KLQPPS 1124
TS +SAA +L+ QY++YL+ +EC+ +RG P E+ + D+ ++ L S
Sbjct: 304 PTSITSAAFTLRTQYMKYLYPYECE-KRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYS 362
Query: 1125 PANS-GSLQGPQTPQST 1140
P + G L P+ P S+
Sbjct: 363 PGGAHGMLSSPKLPVSS 379
Score = 40.0 bits (92), Expect = 0.025
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAA 291
P P + GGGGGGG S GG GG G G AG + + + +
Sbjct: 538 PPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTS 588
Score = 37.0 bits (84), Expect = 0.21
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 1646 GDPSQKALDHNAARKDDSQSLADDSG-----KEEEDAECIDDDEEDEEDEEEDSEKTESD 1700
G P ++ + +A D +EEE E + +DEE+EE++ ED E+ E +
Sbjct: 97 GTPGSPGRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDE 156
Query: 1701 E---KSSIALTAPDAAADPKEKPKQASKFDKLP 1730
E A A K +P QA + D +P
Sbjct: 157 EGLGPPGPASLGTTALFPRKAQPPQAFRGDGVP 189
Score = 33.9 bits (76), Expect = 1.8
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 59 QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA-AGGQADPPG 117
Q+QQ+ +Q+ + +QQ P + G AP + E + A+ +A A +A G
Sbjct: 12 QRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAG 71
Query: 118 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQP 155
+ PG +D PP E R PG G + P
Sbjct: 72 LGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGP 109
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 102 bits (255), Expect = 3e-21
Identities = 222/974 (22%), Positives = 327/974 (33%), Gaps = 121/974 (12%)
Query: 73 QHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPP 132
QH S+ S G + G+ G QHG ++ G+ + +
Sbjct: 233 QHKSSSGQSSGYSQHGSGS-GHSSGYGQHGSRSGQSSRGE----------RHRSSSGSSS 281
Query: 133 KMGEPAGGRYEHPGLG--ALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGG---PG 187
G+ G + G G G++Q P V G G + + GS+ S G G
Sbjct: 282 SYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESG 341
Query: 188 GRAGPCFDQH-------GGQQSPGMGMMHSAS----------AAAAGAPGSMDPLQNSHE 230
F QH G G G HS+S A+++G GS Q+S
Sbjct: 342 SGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSR-QSSSY 400
Query: 231 GYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
G S H G + +G G G G G GSG G G G ++++
Sbjct: 401 GQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTG------FGRSSSSGP 454
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAA-----GSAAGGF 344
+G G G+G + S Q G G G G S S ++ GS+AG
Sbjct: 455 YVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSS 514
Query: 345 QRFAGQNQHPSGATPTLNQLL------TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
+ QH SG+ +L SPSP G + S S+ P +
Sbjct: 515 SSY---GQHGSGSRQSLGHSRHGSGSGQSPSPSR----GRHESGSRQSSSYGPHGYGSGR 567
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
+++ G G ++G+G + Q S + S + + G G T G+S
Sbjct: 568 SSSRGPYESGSGHSSGLGHQESRSGQ----SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 623
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
+ +G + SQ + GS P R+ G+ G
Sbjct: 624 GQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRH---------GSDFGHSSS 674
Query: 519 QQQDSGDATWKETFWLMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQ 577
Q + W + GQ G+ GQ YSQ + S+S
Sbjct: 675 YGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSG 734
Query: 578 QRYQPQQDMSQEG-------YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 630
Q + +Q S G +G+ S G+ + + R S S S
Sbjct: 735 QSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH 794
Query: 631 PTGTEATLSSA--VSASGSTSSQGDQSNPAQSPFSPH--ASPHLSSIPGGPSPSPVGSPV 686
+GT + S S SG S G + + +S H AS H SS S S S
Sbjct: 795 GSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSS 854
Query: 687 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA---------LSQSPMPQERGFMAG 737
G + S SG S Q ES+SH A QSP +RG +G
Sbjct: 855 GQHDSSSGQSSSY-------------GQHESASHHASGRGRHGSGSGQSPGHGQRG--SG 899
Query: 738 TQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSR 797
+ ++P ++G S S G +G S S Y S G +Y +
Sbjct: 900 SGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQ 959
Query: 798 PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
+ SG S S G G S++ HG G Q G G +G P P
Sbjct: 960 HGSRSGQSSRS-EQHGSSSGSSSSYGQHGSGSRQSLGHGQHG----SGSGQSPSPSR--G 1012
Query: 858 MTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS 917
S G S GP + +R E+ + + +SR G G Q G +S
Sbjct: 1013 RHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSG-HSSGLGHRESRSGQSSGYGQHG--SS 1069
Query: 918 SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEE 977
S S + S+ + + A + +SS G S G + G+
Sbjct: 1070 SGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG---SGSGQSP 1126
Query: 978 GTPQPESKSKKSSS 991
G Q S S++S S
Sbjct: 1127 GHGQRGSGSRQSPS 1140
Score = 102 bits (254), Expect = 4e-21
Identities = 303/1398 (21%), Positives = 477/1398 (34%), Gaps = 185/1398 (13%)
Query: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
H S+ +S G G+ G QHG ++ G+ + G +
Sbjct: 468 HESSSEHSSGYTQHGSGS-GHSSGHGQHGSRSGQSSRGE----------RQGSSAGSSSS 516
Query: 134 MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNY----YGSAAPASGGP--- 186
G+ G + G G+ P G + + ++Y YGS +S GP
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYES 576
Query: 187 --GGRAGPCFDQHGGQQSPGMGMMHSAS---------------AAAAGAPGSMDPLQNSH 229
G +G + QS G G S+S +++ G G+ +SH
Sbjct: 577 GSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSH 636
Query: 230 EGYPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGA--GAVA 282
G S + Y + G+G G G G G S G G G+G + G+V+
Sbjct: 637 -GQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVS 695
Query: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG--GGMMMGPGGGGAASLSKAAAGSA 340
++ +G G GY +G S R+ G G G++S ++ G
Sbjct: 696 GQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQH 755
Query: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAA 400
G + +G + SG+ + +++ S S G + +S S S +
Sbjct: 756 GSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCS------SSCGHYES 809
Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPM 460
+G A+G Q +G G G +Q+ +AS ++ S G G T G+S S
Sbjct: 810 GSGQASGFGQHESGSGQGY---SQHGSASGHFS----------SQGRHGSTSGQSSSSGQ 856
Query: 461 DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP-----GAMAGM 515
+ YG + + GS PG + G G++P G+ +G
Sbjct: 857 HDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSG-SGQSPSYGRHGSGSGR 915
Query: 516 QYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ 575
+ G + + + + GQ SGY Q G +S + H Q S+
Sbjct: 916 SSSSGR-HGSGSGQSSGFGHKSSSGQS--SGYTQHGSGSGHSSSYE-QHGSRSGQ--SSR 969
Query: 576 SQQRYQPQQDMSQEG-YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
S+Q S G +G+ S+ L G+ Q PS SGS G
Sbjct: 970 SEQHGSSSGSSSSYGQHGSGSRQSLGHGQ---HGSGSGQSPSPSRGRHGSGS------GQ 1020
Query: 635 EATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSG 694
++ S SG +SS+G P +S S H S + S S S G + S SG
Sbjct: 1021 SSSYGPYRSGSGWSSSRG----PYES-----GSGHSSGLGHRESRSGQSSGYGQHGSSSG 1071
Query: 695 PISPASIPGSQMPP-----QPPGSQSESSSH----PALSQSPMPQERGFMAGTQRNPQMA 745
S GS Q S +SSSH SQS +G +G+ ++P
Sbjct: 1072 HSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG--SGSGQSPGHG 1129
Query: 746 QYGP-QQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGV 804
Q G + PS H S G+ + S +G S G +YS+ + SG
Sbjct: 1130 QRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSG- 1188
Query: 805 PSASYSGPGPGMGISANNQMHG--QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 862
S+ Y G G S+ + HG G S G G S+G G S + S
Sbjct: 1189 HSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSG------HGRQGSGSGHS 1242
Query: 863 PGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG--SFPGMNQSGLMASSSP 920
P + G G+G + Q + + ++ +SR G S G ++SG SS
Sbjct: 1243 PSRGRHGS-GLGHS----SSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESG-SGHSSA 1296
Query: 921 YSQPMNNSSSLMNT-QAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGT 979
YSQ + S + Q S + + +S G + S G+
Sbjct: 1297 YSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGS 1356
Query: 980 PQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKP 1039
Q S+ + S S + G W + GS G
Sbjct: 1357 GQSPSRGRHGSGSGHSS-------SYGQHGSGSGW----SSSSGRHGSGSGQSSGFGHHE 1405
Query: 1040 LDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIE 1099
++ C + G + ++ + + G ++S Y Q+ +
Sbjct: 1406 SSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLG 1465
Query: 1100 R-------GEEPPPEVFSTGDTKKQPKLQPPSPANSG--SLQGPQTPQSTGSNSMAEVPG 1150
G+ P P G Q P + SG S +GP S+ S+ + G
Sbjct: 1466 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL----G 1521
Query: 1151 DLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQ---GMS 1207
+ + S+ +GQ G SST H S S S S ++ + Q G S
Sbjct: 1522 HRESRSGQSSGYGQ-HGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580
Query: 1208 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1267
GR + P G R P + G+ + S +S S G+G+
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGSRQSP--SYGRHGSGS-----GRSSSSGQHGSGLGE 1633
Query: 1268 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1327
F + S + Y Q G G SG +G Q +RH +
Sbjct: 1634 SSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS----GQSSRGERH-------GSS 1682
Query: 1328 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1387
Y S +Q + +G SG + P +G++ G G +HG
Sbjct: 1683 SRSSSRYGQHGSGSRQS--SGHGRQGSGSGQSPSRGRHG--------SGLGHSSSHG--- 1729
Query: 1388 QMMGGPLQSSSSEGPQQN 1405
G SSS GP ++
Sbjct: 1730 -QHGSGSGRSSSRGPYES 1746
Score = 94.7 bits (234), Expect = 9e-19
Identities = 184/815 (22%), Positives = 283/815 (34%), Gaps = 99/815 (12%)
Query: 163 GGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGGQQSPGM-GMMHSASAAAAG 217
G G F ++ S+ +SG G G ++QHG + G H +S+ ++
Sbjct: 1392 GSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSS 1451
Query: 218 APGSMDPLQNSHEGYPNSQCNHYPGYS-RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
+ G S + + Q G S P G G G G S G G G + + G
Sbjct: 1452 SYGQHG--SGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGP 1509
Query: 277 GAGAVAAAAAAAAAAAGGGGGGGYG--GSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK 334
+ ++ + G GYG GSS+G+ G G GA+S
Sbjct: 1510 YESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQS 1569
Query: 335 AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
++ G G + +G + SG+ SP R G PS
Sbjct: 1570 SSHGQHGSGSSQSSGYGRQGSGSG-------QSPGHGQRGSGSR-----------QSPSY 1611
Query: 395 PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQR----SHPAMSPGTPGP 450
+ + + +++ GQ G GLG+ G + +S +++ + S + G G
Sbjct: 1612 GRHGSGSGRSSSSGQH---GSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGS 1668
Query: 451 TMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGI------ 504
G+S + YG + Q GS P R+ G+
Sbjct: 1669 RSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH 1728
Query: 505 -QGRTPGAMAGMQYPQQQDSGDAT---WKETFWLMPPQYGQQGVSG--YCQQGQQPYYSQ 558
Q + + + P + SG ++ E+ Y Q G +C QGQ S
Sbjct: 1729 GQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSG 1788
Query: 559 QPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 618
Q + Q+ Q S +G+ S + G+ + R
Sbjct: 1789 QSS------------TFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHG 1836
Query: 619 SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG----DQSNPAQSPFSPH--ASPHLSS 672
S S S +G+ + SS SGS S G + S+ S ++ H S H SS
Sbjct: 1837 SGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSS 1896
Query: 673 IPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQER 732
S S S + S SG S GS Q S S QSP P
Sbjct: 1897 YEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGS----GQSPSPSRG 1952
Query: 733 GFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNS--SGTYGPQMSQYG 790
+G+ ++ YG +G S S P G H+ ++S S S YG S G
Sbjct: 1953 RHGSGSGQSSSYGPYG-SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSG 2011
Query: 791 PQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
+ + + SG S+S G G S+++ HG G SQ G GR S Q+ P
Sbjct: 2012 HSSTHGQHGSASG-QSSSCGQHGASSGQSSSHGQHGSGSSQSSG---YGRQGSGSGQS-P 2066
Query: 851 FPGNMSSMTPSSPGMSQQG------------GPGMGPPMPTVNRKAQEA-AAAVMQAAAN 897
G S + SP + G GPG+G + ++ +++ Q +
Sbjct: 2067 GHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSG 2126
Query: 898 SAQS----RQGSFPGMNQSG-----LMASSSPYSQ 923
S S + GS G + G SSS Y Q
Sbjct: 2127 SGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQ 2161
Score = 94.0 bits (232), Expect = 1e-18
Identities = 320/1466 (21%), Positives = 455/1466 (31%), Gaps = 162/1466 (11%)
Query: 44 HHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGG 103
HH + Q + + Q Q S +S G G + Q G
Sbjct: 1169 HHESSSGQSSSYSQHGSGSGHSSGYGQHGSR--SGQSSRGERHGSSSGSSSHYGQHGSGS 1226
Query: 104 AKDSAAGGQADPPG-PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG- 161
+ S G Q G P + G G+ G G ++ +V G
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286
Query: 162 ---GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC--FDQHG---GQQSP----GMGMMH 209
G G +A + + G + G G +G FDQ G GQ S G G
Sbjct: 1287 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 1345
Query: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGG 268
S+ GA P + H S H Y + G+G G G G GSG G
Sbjct: 1346 SSGYGRHGAGSGQSPSRGRH----GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGF 1401
Query: 269 G----------GAGAGGAGAGAVAAA---AAAAAAAAGGGGGGGYGGSSAGYGVLSS-PR 314
G G G+G+G ++ + + ++ G G GSS+ YG S R
Sbjct: 1402 GHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSR 1461
Query: 315 QQGGGMMMGPGGGGAASLSKAAAGSAAG------------GFQRFAGQNQHPSGATPTLN 362
Q G G G G + S S+ GS +G G+ G + S + L
Sbjct: 1462 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLG 1521
Query: 363 QLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
S S YG GS +SS S S GA++G + G G
Sbjct: 1522 HR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580
Query: 421 MGAQY------AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
+ Y + SP S + S G G GRS S + +G
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHH 1640
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWL 534
+ Q S + GS G ++ G+ +G Q + + G ++ +
Sbjct: 1641 ESSSGQSSSYSQHGSGSGHSSGYGQH---------GSRSG-QSSRGERHGSSSRSSS--- 1687
Query: 535 MPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTR 594
+YGQ G G S Q P L S Q G G+
Sbjct: 1688 ---RYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH--------GQHGSGSG 1736
Query: 595 SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQ 654
P + ++ Q S + S +G + S SG SS DQ
Sbjct: 1737 RSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ-SSTFDQ 1795
Query: 655 SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQ 714
+ S H H S S GS G + SR S G GS
Sbjct: 1796 EGSSTGQSSSHGQ-HGSGSSQSSSYGQQGSGSGQSPSRG---RHGSGSGHSSSYGQHGSG 1851
Query: 715 SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP----SMSPHPSPGGQMHAGI 770
S SS S Q GF + Q + Y +G S H S GQ G
Sbjct: 1852 SGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGE 1911
Query: 771 SSFQQSNSSGTYGPQMS---QYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQ 827
S SS +YG S Q G + S PS G G G S G
Sbjct: 1912 QHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGS 1971
Query: 828 GPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 887
G S G G S+G+ G+ S + S G Q G + A
Sbjct: 1972 GWSSSRGPYESGSGHSSGL------GHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQ 2025
Query: 888 AAAVMQAAANSAQS-----------------RQGS----FPGMNQSGLMASSSPYSQPMN 926
+++ Q A+S QS RQGS PG Q G + SP S +
Sbjct: 2026 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP-SYGRH 2084
Query: 927 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKS 986
S S ++ + + P + SS G + S S G G Q S+S
Sbjct: 2085 GSGSGRSSSSGQHG--PGLGESSG--FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS 2140
Query: 987 KKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLY 1046
+SS G G R + +GS P+ G+
Sbjct: 2141 GQSSRGERHGSSSGSSSRYGQHGSGS----RQSSGHGRQGSGSGHSPSRGRHGSGSGHSS 2196
Query: 1047 VCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPP 1106
+ G + + + + + +V + S Y Q+ +G+
Sbjct: 2197 SHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQH--- 2253
Query: 1107 EVFSTGDTKKQPKL--QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQ 1164
G T Q Q S S G S+ S+S + G +P+ HG
Sbjct: 2254 -----GSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQ-QGSGSGQSPSRGRHGS 2307
Query: 1165 MTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPF 1224
+ G SS+ H S S SS + ++ + S +
Sbjct: 2308 GS----GHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGH 2363
Query: 1225 GGMRKVPGSSEPFMTQGQMPNSSM--QDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHE 1282
+ GS ++G+ SS Y Q SG+ +LG GQ +G+ +
Sbjct: 2364 SSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQ-----HGSGSGQSPS 2418
Query: 1283 P-YGQQYPGQGPPSGQPPYGGHQPGLYPQQP--NYKRHMDGMYGPPAKRHEGDMYNMQYS 1339
P G+ G G S PYG + P + H G+ ++ + Y S
Sbjct: 2419 PSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 2478
Query: 1340 SQQQEMYNQYGGSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSS 1398
S + GS SG Q G S G G Q+ G Q G S
Sbjct: 2479 SSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG----SGQ 2534
Query: 1399 SEGPQQNMWAARNDMPYPYQNRQGPG 1424
S G Q +R P R G G
Sbjct: 2535 SPGHGQRGSGSRQS---PSYGRHGSG 2557
Score = 93.6 bits (231), Expect = 2e-18
Identities = 312/1474 (21%), Positives = 460/1474 (31%), Gaps = 164/1474 (11%)
Query: 67 QQQQQQQHPISN--NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
Q + +QH S+ ++S G G G+ Q Q G S + +
Sbjct: 735 QSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH 794
Query: 125 GDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG 184
G G G + G G + G G G + + ++ S
Sbjct: 795 GSGTSCSSSCGHYESGSGQASGFGQHES--------GSGQGYSQHGSASGHFSSQGRHGS 846
Query: 185 GPGGRAGPCFDQHGGQQSPGMGMMHSAS--AAAAGAPGSMDPLQNSHEGYPNSQCNHYPG 242
G + QS G SAS A+ G GS H G S P
Sbjct: 847 TSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGH-GQRGSGSGQSPS 905
Query: 243 YSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA----GGGGG 297
Y R G+G G G G GSG G G + G +G + + +++ G G
Sbjct: 906 YGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSG 965
Query: 298 --------GGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGGAASLSKAAAGSAAG------ 342
G GSS+ YG S RQ G G G G + S S+ GS +G
Sbjct: 966 QSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYG 1025
Query: 343 ------GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQ 394
G+ G + SG + L S S YG GS +SS S
Sbjct: 1026 PYRSGSGWSSSRGPYESGSGHSSGLGHR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSG 1084
Query: 395 PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQY------AAASPAWAAAQQRSHPAMSPGTP 448
S GA++G + G G + Y + SP S + S G
Sbjct: 1085 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRH 1144
Query: 449 GPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRT 508
G GRS S + +G + Q S + GS G ++
Sbjct: 1145 GSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQH-------- 1196
Query: 509 PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGV-----SGYCQQGQQPYYSQQPQPP 563
G+ +G Q + + G ++ + YGQ G SG+ +QG +S P
Sbjct: 1197 -GSRSG-QSSRGERHGSSSGSSS------HYGQHGSGSRQSSGHGRQGSGSGHS--PSRG 1246
Query: 564 HLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK----PNHEDL---------N 610
+ S Q + S+ Y +RS G+ H +
Sbjct: 1247 RHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGH 1306
Query: 611 LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 670
Q + S S + D + T + S SGS+ S G + A S SP H
Sbjct: 1307 FCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHG 1366
Query: 671 SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQ 730
S S S G + S SG S + GS ESSS QS
Sbjct: 1367 SG-------SGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSW----QSSGCT 1415
Query: 731 ERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYG 790
+ G +G+ + Q+G + S G+ H SS S+S G +G Q
Sbjct: 1416 QHG--SGSGHSSSYEQHGSRSGQSSR-------GERHG--SSSGSSSSYGQHGSGSRQSL 1464
Query: 791 PQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
G + S PS G G G S + G G S G G S+G+
Sbjct: 1465 GHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL---- 1520
Query: 851 FPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN 910
G+ S + S G Q G + +++ Q A+S QS G
Sbjct: 1521 --GHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSG 1578
Query: 911 QS-----GLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS------------V 953
S G S S S P + + Q+P Y + S++S
Sbjct: 1579 SSQSSGYGRQGSGSGQS-PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGF 1637
Query: 954 GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
G + S S G G Q S+S +SS G G
Sbjct: 1638 GHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGS- 1696
Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
R + +GS P+ G+ L + G + + + + + +V
Sbjct: 1697 ---RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSV 1753
Query: 1074 GTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKL--QPPSPANSGSL 1131
+ S Y Q+ +G+ G T Q Q S S
Sbjct: 1754 FGQHESGSGHSSAYSQHGSGSGHFCSQGQH--------GSTSGQSSTFDQEGSSTGQSSS 1805
Query: 1132 QGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFP 1191
G S+ S+S + G +P+ HG + G SS+ H S S SS
Sbjct: 1806 HGQHGSGSSQSSSYGQ-QGSGSGQSPSRGRHGSGS----GHSSSYGQHGSGSGWSSSSGR 1860
Query: 1192 KRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSM--Q 1249
+ ++ + S + + GS ++G+ SS
Sbjct: 1861 HGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSS 1920
Query: 1250 DMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP-YGQQYPGQGPPSGQPPYGGHQPGLY 1308
Y Q SG+ +LG GQ +G+ + P G+ G G S PYG
Sbjct: 1921 SSYGQHGSGSRQSLGHGQ-----HGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSS 1975
Query: 1309 PQQP--NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQ-GQY 1365
+ P + H G+ ++ + Y SS + GS SG Q G
Sbjct: 1976 SRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGAS 2035
Query: 1366 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1425
S G G Q+ G Q G S S G Q +R Y
Sbjct: 2036 SGQSSSHGQHGSGSSQSSGYGRQGSG----SGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 2091
Query: 1426 PTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVS 1459
+ PG+ + + S + H S
Sbjct: 2092 SSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGS 2125
Score = 86.7 bits (213), Expect = 2e-16
Identities = 234/999 (23%), Positives = 337/999 (33%), Gaps = 137/999 (13%)
Query: 15 GEAPAAPPHQQHHHHHHAHHHHH----HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQ 70
G + H+ H A+ H H H + Q + F Q+ Q Q
Sbjct: 1749 GHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ 1808
Query: 71 QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDD 129
S ++S G G G+ Q P + G S+ G G S + G
Sbjct: 1809 HGSGS-SQSSSYGQQGSGSGQ-SPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1866
Query: 130 APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----- 184
G ++ G G+ + G + +GS++ +S
Sbjct: 1867 QSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQH 1926
Query: 185 GPGGRAGPCFDQHG---GQQ-SPGMGMMHSASAAAA--GAPGSMDPLQNSHEGYPNSQCN 238
G G R QHG GQ SP G S S ++ G GS +S Y S
Sbjct: 1927 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPY-ESGSG 1985
Query: 239 HYPGY----SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
H G SR G G G G G S G G A + G A++ +++
Sbjct: 1986 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQH 2045
Query: 295 GGGG----GYGGSSAGYGVLSSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFA 348
G G GYG +G G Q+G G P G G+ S +++G G +
Sbjct: 2046 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESS 2105
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGG 408
G H S + + + S + Y ++ S S S+ + +++G+++
Sbjct: 2106 GFGHHESSSGQSSSY---SQHGSGSGHSSGYGQHGSRSGQS---SRGERHGSSSGSSSRY 2159
Query: 409 QQAAAGMGLGKDMGAQYAAA--SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMK 466
Q +G G Q + + SP+ S + S G G GRS
Sbjct: 2160 GQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSG 2219
Query: 467 RPQLYGM---GSNPHSQPQQSSPYPG-----GSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
++G GS S Q G G +G Q +G + G +
Sbjct: 2220 HSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHG-- 2277
Query: 519 QQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQ 578
Q SG + YGQQG SG GQ P S+ + Y S
Sbjct: 2278 -QHGSGSS--------QSSSYGQQG-SG---SGQSP--SRGRHGSGSGHSSSYGQHGSGS 2322
Query: 579 RYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATL 638
+ G G S G +HE SS SG G+ +
Sbjct: 2323 GWSSSSGRHGSGSGQSS------GFGHHE----------SSSWQSSGYTQH---GSGSGH 2363
Query: 639 SSAVSASGSTSSQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR 692
SS+ GS S Q + S+ + S + H S S+ G S G ++ R
Sbjct: 2364 SSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGR 2423
Query: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
G S G P GS S SS +S G R+ Q + YG Q
Sbjct: 2424 HGSGS-----GQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYG--QH 2476
Query: 753 GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP---QMSQYGPQGN-------YSRPPAYS 802
G S S H S GQ H S QS+S G +G Q S +G G+ Y R + S
Sbjct: 2477 GSS-SGHSSTHGQ-HGSTSG--QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGS 2532
Query: 803 GV------------PSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
G S SY G G G S+++ HG G + G G S+ Q+
Sbjct: 2533 GQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG---FGHHESSSGQSSS 2589
Query: 851 FPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS----RQGSF 906
+ + S SS G Q G + + +++ Q + S QS RQGS
Sbjct: 2590 YSQHGSGSGHSS-GYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSG 2648
Query: 907 PGMNQ------SGLMASSSPYSQPMNNSSSLMNTQAPPY 939
G + SGL SS S + S S ++ PY
Sbjct: 2649 SGQSPSRGRHGSGLGHSS---SHGQHGSGSGRSSSRGPY 2684
Score = 84.3 bits (207), Expect = 1e-15
Identities = 216/1029 (20%), Positives = 328/1029 (31%), Gaps = 149/1029 (14%)
Query: 38 HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDME 97
H+ L H + Q + + Q Q S + G G
Sbjct: 1516 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG----STSGQSSSCGQHGASSGQSSS 1571
Query: 98 QPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPV 157
QHG ++G + G P G+ G + P G G+
Sbjct: 1572 HGQHGSGSSQSSG----------YGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 1621
Query: 158 AVPGG-GGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHG---GQQSPGMGMMH 209
+ G G G F ++ S+ +S G G + QHG GQ S G
Sbjct: 1622 SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGS 1681
Query: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
S+ +++ Q+S G S P R G+G G G G G
Sbjct: 1682 SSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSR 1741
Query: 270 GAGAGGAGAGAV-----AAAAAAAAAAAGGGGGG-----GYGGSSAGYGVLSSPRQQGGG 319
G +G +V + + ++A + G G G G GS++G G
Sbjct: 1742 GPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTG 1801
Query: 320 MMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSY 379
G G+ S ++ G G + + +H SG+ + SY
Sbjct: 1802 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGS----------------GHSSSY 1845
Query: 380 PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA----ASPAWAAA 435
++ S S ++++G G ++G G + Q + S + ++
Sbjct: 1846 GQHGSGSG----------WSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSS 1895
Query: 436 QQRSHPAMS-PGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG-GSYG 493
H + S + G G S GS +G H SP P G +G
Sbjct: 1896 SYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 1955
Query: 494 PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATW---KETFWLMPPQYGQQGVSGYCQQ 550
Q G G G + + P + SG ++ +E+ YGQ G S
Sbjct: 1956 SGSGQSSSYGPYGSGSG-WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSS 2014
Query: 551 GQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLN 610
+ S Q S GYG + + P H
Sbjct: 2015 THGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG--SGQSPGHGQRG 2072
Query: 611 LIQQERPSSLPDLSGS--------------------IDDLPTGTEATLSSAVSASGSTSS 650
++ PS SGS + +G ++ S S SG +S
Sbjct: 2073 SGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2132
Query: 651 QGDQSNPA--QSPFSPHASPHLSSIPGGP--SPSPVGSPVGSNQSRSGPISPASIPGSQM 706
G + + S H S SS G S S S G S SG GS
Sbjct: 2133 YGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGS 2192
Query: 707 PPQPPGSQSESSSHPALSQSPMPQERGFMA-------GTQRNPQMAQYGPQQTG-PSMSP 758
Q S S + S+ P G + G+ + +Q+G S
Sbjct: 2193 GHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQ 2252
Query: 759 HPSPGGQMHAGISSFQQSNSS----------GTYGPQMSQYGPQGNYS-------RPPAY 801
H S GQ S+F Q SS G+ Q S YG QG+ S R +
Sbjct: 2253 HGSTSGQS----STFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSG 2308
Query: 802 SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 861
SG S+SY G G G S+++ HG G Q G G S+ Q+ + + S S
Sbjct: 2309 SG-HSSSYGQHGSGSGWSSSSGRHGSGSGQSSG---FGHHESSSWQSSGYTQHGSGSGHS 2364
Query: 862 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPY 921
S +Q G G + + ++ + + + SRQ G + SG S SP
Sbjct: 2365 S--SYEQHGSRSG--QSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP- 2419
Query: 922 SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ 981
S+ + S S ++ PY + G + P ES G G
Sbjct: 2420 SRGRHGSGSGQSSSYSPY----------GSGSGWSSSRGPYES-------GSGHSSGLGH 2462
Query: 982 PESKSKKSS 990
ES+S +SS
Sbjct: 2463 RESRSGQSS 2471
Score = 80.5 bits (197), Expect = 2e-14
Identities = 178/841 (21%), Positives = 263/841 (31%), Gaps = 115/841 (13%)
Query: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGA--------KDSAAGGQADPPGPPLLSKPG 125
H S + G G G QHG A + A+ GQ+ G + G
Sbjct: 1992 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG-----QHG 2046
Query: 126 DEDDAPPKMGEPAGGRYEHPGLGALGT---QQPPVAVPGGGGGPAAVPE----------- 171
G G + PG G G+ Q P G G G ++
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSG 2106
Query: 172 FNNYYGSAAPASG----GPGGRAGPCFDQHG---GQQSPGMGMMHSASAAAAGAPGSMDP 224
F ++ S+ +S G G + QHG GQ S G S+ +++
Sbjct: 2107 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGS 2166
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV--- 281
Q+S G S H P R G+G G G G G G +G +V
Sbjct: 2167 RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 2226
Query: 282 --AAAAAAAAAAAGGGGGG-----GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK 334
+ + ++A + G G G G GS++G G G G+ S
Sbjct: 2227 HESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQS 2286
Query: 335 AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
++ G G + + +H SG+ + SY ++ S S
Sbjct: 2287 SSYGQQGSGSGQSPSRGRHGSGS----------------GHSSSYGQHGSGSG------- 2323
Query: 395 PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA----ASPAWAAAQQRSHPAMS-PGTPG 449
++++G G ++G G + Q + S + ++ H + S + G
Sbjct: 2324 ---WSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 2380
Query: 450 PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG-GSYGPPGPQRYPIGIQGRT 508
G S GS +G H SP P G +G Q G
Sbjct: 2381 ERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSG 2440
Query: 509 PGAMAGMQYPQQQDSGDATW---KETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHL 565
G + + P + SG ++ +E+ YGQ G S + S Q
Sbjct: 2441 SG-WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 2499
Query: 566 PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSG 625
S GYG + + P H ++ PS SG
Sbjct: 2500 GQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG--SGQSPGHGQRGSGSRQSPSYGRHGSG 2557
Query: 626 SIDDLPTGTEATLSSAVSASGS-TSSQGDQSNPAQ--------SPFSPHASPHLSSIPGG 676
S +G + S G SS G S+ +Q S + H S S G
Sbjct: 2558 SGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGE 2617
Query: 677 PSPSPVGSPV-------GSNQSR--------SGPISPASIPGSQMPPQPPGSQSESSSHP 721
S GS GS QS SG GS + Q S S
Sbjct: 2618 RHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGR 2677
Query: 722 ALSQSPMPQERGFMA-------GTQRNPQMAQYGPQQTG-PSMSPHPSPGGQMHAGISSF 773
+ S+ P G + G+ + +Q+G S H S GQ
Sbjct: 2678 SSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEG 2737
Query: 774 QQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 833
+ S +YG + S Y R A SG S S+ G G G S++ HG G Q
Sbjct: 2738 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSG-QSLSHGRHGSGSGQSSSYGQHGSGSGQSS 2796
Query: 834 G 834
G
Sbjct: 2797 G 2797
Score = 79.7 bits (195), Expect = 3e-14
Identities = 152/731 (20%), Positives = 231/731 (31%), Gaps = 116/731 (15%)
Query: 209 HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG 268
H++ + + + G + +SH+ QC G S P G G G G G G
Sbjct: 169 HNSYSGQSSSYGEQN--SDSHQSSGRGQCGSGSGQS-PNYGQHGSGSGQSSSNDTHGSGS 225
Query: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG--GSSAGYGVLSSPRQQGGGMMMGPGG 326
G + + ++ + +G G GYG GS +G + G G
Sbjct: 226 GQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ 285
Query: 327 GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
G+ S G G ++ +H SG+ + S+ ++ S S
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGS----------------GHSSSHGQHGSGS 329
Query: 387 APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPG 446
S + + G G +G G + Q S ++ S + S G
Sbjct: 330 ----------SYSYSRGHYESGSGQTSGFGQHESGSGQ----SSGYSKHGSGSGHSSSQG 375
Query: 447 TPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQG 506
G T G++ S ++ YG + + GS G
Sbjct: 376 QHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGS--------------G 421
Query: 507 RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP 566
++PG Q+ SG P GQ G PY S
Sbjct: 422 QSPG-------HGQRGSGSG--------QSPSSGQHGTGFGRSSSSGPYVS--------- 457
Query: 567 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS 626
+ Y + +G+ S G+ + ER S S S
Sbjct: 458 -GSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSS 516
Query: 627 IDDLPTGTEATLSSAVSASGSTSS------QGDQSNPAQSPFSPHASPHLSSIPGGPSPS 680
+G+ +L + SGS S + + + S + PH S GP S
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYES 576
Query: 681 PVG--SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALS-QSPMPQERGFMAG 737
G S +G +SRSG S GS G S H + S QS + G +G
Sbjct: 577 GSGHSSGLGHQESRSGQSSGYGQHGSS-----SGHSSTHGQHGSTSGQSSSCGQHGATSG 631
Query: 738 TQR--------NPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
+ Q ++YG Q +G SP G SS+ Q S + S
Sbjct: 632 QSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWS---SSN 688
Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
GP G+ S +S G G G S+ HG G S G G +R
Sbjct: 689 GPHGSVS--------GQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHG--------SR 732
Query: 850 PFPGNMSSMTPSSPGMSQQ-GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 908
+ S SS G+S G G G + + + + + + S S G
Sbjct: 733 SGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHG 792
Query: 909 MNQSGLMASSS 919
+ SG SSS
Sbjct: 793 QHGSGTSCSSS 803
Score = 77.4 bits (189), Expect = 1e-13
Identities = 198/851 (23%), Positives = 288/851 (33%), Gaps = 85/851 (9%)
Query: 176 YGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
YG S GR G C G QSP G S S ++ N G +
Sbjct: 179 YGEQNSDSHQSSGR-GQCGS--GSGQSPNYGQHGSGSGQSSS---------NDTHGSGSG 226
Query: 236 QCNHYPGY-SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Q + + + S G G G G G S G G G+ +G + G +++ ++++ G
Sbjct: 227 QSSGFSQHKSSSGQSSGYSQHGSGSGHS-SGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ 285
Query: 295 GGGG---GYGGSSAGYGVLSSPRQ----QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRF 347
G G G G G SP G G G G+ S + G G +
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQT 345
Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
+G QH SG+ + S + S ++ S S Q ++ ++ G
Sbjct: 346 SGFGQHESGSGQSSGY---SKHGSGSGHSSSQGQHGSTSGQASSSGQ-HGSSSRQSSSYG 401
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
++A+ G+ + + SP S + S G G GRS S P V
Sbjct: 402 QHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSS--GPYVSGS 459
Query: 468 PQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDAT 527
G G + S + SS Y +G G G G Q + + G +
Sbjct: 460 GYSSGFGHH-ESSSEHSSGYT--QHGSGSGHSSGHGQHGSRSG-----QSSRGERQGSSA 511
Query: 528 WKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMS 587
+ YGQ G G + S Q P PS+ + +Q S
Sbjct: 512 GSSS------SYGQHGSGSRQSLGHSRHGSGSGQSPS--------PSRGRHESGSRQSSS 557
Query: 588 --QEGYG---TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAV 642
GYG + S+ P G + L QE S G +G +T
Sbjct: 558 YGPHGYGSGRSSSRGPYESGSGHSSGLG--HQESRSGQSSGYGQ-HGSSSGHSSTHGQHG 614
Query: 643 SASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIP 702
S SG +SS G A S S H S GS G + SR S
Sbjct: 615 STSGQSSSCGQHG--ATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFG-H 671
Query: 703 GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS-MSPHPS 761
S GS SS+ P S S G +G+ ++ +Q+G + S H S
Sbjct: 672 SSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGS 731
Query: 762 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 821
GQ S S +YG S + R + SG S S G G S++
Sbjct: 732 RSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSG-HSPSRVRHGSSSGHSSS 790
Query: 822 NQMHGQGP--SQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPM 877
+ HG G S CG G ++G Q+ G S S+ G S QG G
Sbjct: 791 HGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQ 850
Query: 878 PTV-----NRKAQEAAAAVMQAAANSAQSR------QGSFPGMNQSGLMASSSPYSQPMN 926
+ + Q ++ ++A++ A R G PG Q G + SP S +
Sbjct: 851 SSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP-SYGRH 909
Query: 927 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESK-LPLPLKADGKEEGTPQPESK 985
S S ++ + + + S S G S G+S G Q S+
Sbjct: 910 GSGSGRSSSSGRHG------SGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSR 963
Query: 986 SKKSSSSTTTG 996
S +SS S G
Sbjct: 964 SGQSSRSEQHG 974
Score = 77.4 bits (189), Expect = 1e-13
Identities = 172/755 (22%), Positives = 248/755 (32%), Gaps = 114/755 (15%)
Query: 100 QHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV 159
QHG ++ G+ + G + + G+ G + G G G+
Sbjct: 2135 QHGSRSGQSSRGE----------RHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPS 2184
Query: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPG---GRAG--PCFDQH---GGQQSP----GMGM 207
G G + + +GS + S G R+G F QH G S G G
Sbjct: 2185 RGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGS 2244
Query: 208 MHSASAAAAGAPGSMDPL---QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGG 264
H S G+ + S G +S H G S+ + G G G G G
Sbjct: 2245 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 2304
Query: 265 GGGGGGA----GAGGAGAGAVAAAAAAAAAAAGGGGGG----------GYGGSSAGYGVL 310
G G G G G+G+G +++ + + G G GY +G G
Sbjct: 2305 HGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHS 2364
Query: 311 SSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP 368
SS Q G G G++S S ++ G G ++ G QH SG+ SP
Sbjct: 2365 SSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQ-------SP 2417
Query: 369 SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
SP +G + SS S P +++ G G ++G+G + Q
Sbjct: 2418 SPSRGRHGSGSGQSSSYS----PYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQ---- 2469
Query: 429 SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
S + S + + G G T G+S G + S Q SS
Sbjct: 2470 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC---------------GQHGASSGQSSSH-- 2512
Query: 489 GGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
G +G Q G QG G G Q+ SG P YG+ G
Sbjct: 2513 -GQHGSGSSQSSGYGRQGSGSGQSPGHG---QRGSGSR--------QSPSYGRHG----- 2555
Query: 549 QQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED 608
G S L + + +S Q S +G+ S G+
Sbjct: 2556 -SGSGRSSSSGQHGSGLGESSGFGHHESSSG----QSSSYSQHGSGSGHSSGYGQHGSRS 2610
Query: 609 LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA----QSPFSP 664
+ ER S S +G+ + SGS S + + S
Sbjct: 2611 GQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQ 2670
Query: 665 HASPHLSSIPGGPSPSPVG--SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA 722
H S S GP S +G S G ++S SG S S GS Q S+S
Sbjct: 2671 HGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTS--- 2727
Query: 723 LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP----HPSPGGQMHAGISSFQQSNS 778
QS + G G Q + YG + +G S S H + GQ + S
Sbjct: 2728 -GQSSTFDQEGSSTG-----QSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQ 2781
Query: 779 SGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPG 813
S +YG S G YS+ + SG SY G
Sbjct: 2782 SSSYGQHGSGSGQSSGYSQHGSGSGQDGYSYCKGG 2816
Score = 58.9 bits (141), Expect = 5e-08
Identities = 199/891 (22%), Positives = 292/891 (32%), Gaps = 134/891 (15%)
Query: 633 GTEATLSSAVSASGSTSSQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 686
G+ + SS GS S Q + S+ + S + H S S+ G S
Sbjct: 248 GSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGS------ 301
Query: 687 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 746
GS QS S + S G GS S S +S Q GF + Q +
Sbjct: 302 GSRQSPSH-VRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSG 360
Query: 747 YGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP---QMSQYGPQGNYSRPPAYSG 803
Y +G S H S GQ H S Q++SSG +G Q S YG + SR + G
Sbjct: 361 YSKHGSG---SGHSSSQGQ-HGSTSG--QASSSGQHGSSSRQSSSYGQHESASRHSSGRG 414
Query: 804 VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFP---------GN 854
S+ SG PG G + GQ PS GR S+G P+ G+
Sbjct: 415 QHSSG-SGQSPGHGQRGSGS--GQSPSSGQHGTGFGRSSSSG----PYVSGSGYSSGFGH 467
Query: 855 MSSMTPSSPGMSQQGGP----------GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG 904
S + S G +Q G G + + +A + + + SRQ
Sbjct: 468 HESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQS 527
Query: 905 SFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSS---------AASVGL 955
+ SG S SP S+ + S S ++ P+ +S ++ +G
Sbjct: 528 LGHSRHGSGSGQSPSP-SRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGH 586
Query: 956 ADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWV 1015
+ S S + G Q S S +SSS G + G
Sbjct: 587 QESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQS 646
Query: 1016 DRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGT 1075
RY ++GS P+ G+ D + G + N ++ + G
Sbjct: 647 SRY----GQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSS-GF 701
Query: 1076 SSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSG-----S 1130
+ S Y Q+ G G Q ++SG
Sbjct: 702 GHKSGSGQSSGYSQH--------GSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYG 753
Query: 1131 LQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSF 1190
G + QS+G G +P+ HG + G SS+ H + S S
Sbjct: 754 QHGSGSHQSSGHGRQGSGSGH----SPSRVRHGSSS----GHSSSHGQHGSGTSCSSSC- 804
Query: 1191 PKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQD 1250
Y+ G G+ + G + +S F +QG+ ++S
Sbjct: 805 ---------GHYESGSGQASGFGQHESGSGQ----GYSQHGSASGHFSSQGRHGSTS--- 848
Query: 1251 MYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQ 1310
QS S + GQ YG H G+ G G SGQ P G + Q
Sbjct: 849 --GQSSSSGQHDSSSGQSSS--YGQHESASHHASGRGRHGSG--SGQSPGHGQRGSGSGQ 902
Query: 1311 QPNYKRH--------MDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG------------ 1350
P+Y RH G +G + + G + + SS Q Y Q+G
Sbjct: 903 SPSYGRHGSGSGRSSSSGRHGSGSGQSSG--FGHKSSSGQSSGYTQHGSGSGHSSSYEQH 960
Query: 1351 GSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAA 1409
GS SG R Q G S G G Q+ G Q G QS S + +
Sbjct: 961 GSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLG-HGQHGSGSGQSPSPSRGRHGSGSG 1019
Query: 1410 RNDMPYPYQNRQGPGGPTQAPPY-PGMNRTDDMMVPDQRINHESQWPSHVS 1459
++ PY R G G + PY G + + + R S + H S
Sbjct: 1020 QSSSYGPY--RSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 1068
Score = 49.7 bits (117), Expect = 3e-05
Identities = 84/399 (21%), Positives = 128/399 (32%), Gaps = 67/399 (16%)
Query: 24 QQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLG 83
Q + H H + H H Q + Q Q Q S+
Sbjct: 2469 QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ 2528
Query: 84 GAGGG-APQPGP----DMEQPQHG----GAKDSAAGGQADPPGPPLLSKPG-----DEDD 129
G+G G +P G + P +G G+ S++ GQ G L G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQH---GSGLGESSGFGHHESSSG 2585
Query: 130 APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGR 189
+ G G G G++ + G + +GS + S G G R
Sbjct: 2586 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHG-R 2644
Query: 190 AGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPGSMDPLQN-----SHEGYPNSQCNHY 240
G Q + G G+ HS+S + +G S P ++ S G S H
Sbjct: 2645 QGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHS 2704
Query: 241 PGYSRPGAGGG--------GGGGGGG------GGGSGGGGGGGGAGAGGAGAGAVAAAAA 286
YS+ G+G G G G G +G G G+G + + A
Sbjct: 2705 SAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGA 2764
Query: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQR 346
+ + G G G S+ YG G G G ++ S+ +GS G+
Sbjct: 2765 GSGQSLSHGRHGSGSGQSSSYG------------QHGSGSGQSSGYSQHGSGSGQDGYSY 2812
Query: 347 FAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSP 385
G + H G++ SY S+P +SP
Sbjct: 2813 CKGGSNHDGGSS--------------GSYFLSFPSSTSP 2837
Score = 43.9 bits (102), Expect = 0.002
Identities = 81/328 (24%), Positives = 110/328 (33%), Gaps = 59/328 (17%)
Query: 1126 ANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDV 1185
++S G + QS G G + P+P+ HG + G+SS+ S + S
Sbjct: 2390 SSSYGQHGSGSRQSLGHGQHGSGSG--QSPSPSRGRHGSGS----GQSSSYSPYGSGSGW 2443
Query: 1186 SDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1245
S S PY+ G +G E G + SS T GQ +
Sbjct: 2444 SSS----------RGPYESGSGHSSGLGHR--ESRSGQSSGYGQHGSSSGHSSTHGQHGS 2491
Query: 1246 SSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQP 1305
+S QS S GQ S + YG+Q G SGQ P G +
Sbjct: 2492 TS-----GQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ----GSGSGQSPGHGQRG 2542
Query: 1306 GLYPQQPNYKRHMDGMYGPPAKRHEGD-------MYNMQYSSQQQEMYNQYG-------- 1350
Q P+Y RH G + G + + SS Q Y+Q+G
Sbjct: 2543 SGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2602
Query: 1351 ----GSYSGPDRR-PIQGQYPYPYSRERMQGPGQIQTHGIPPQ-----------MMGGPL 1394
GS SG R G S G G Q+ G Q G L
Sbjct: 2603 YGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGL 2662
Query: 1395 QSSSSEGPQQNMWAARNDMPYPYQNRQG 1422
SSS G Q + R+ PY++R G
Sbjct: 2663 GHSSSHG-QHGSGSGRSSSRGPYESRLG 2689
Score = 31.6 bits (70), Expect = 8.9
Identities = 63/270 (23%), Positives = 85/270 (31%), Gaps = 29/270 (10%)
Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVH 1179
Q P+ GS G + T + + G + + + G G G SS H
Sbjct: 201 QSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQH 260
Query: 1180 DPFSDVSDSSFPKRNSMTPNAPYQQ---GMSMPDVMGRMPYEPNKDPFGGMRKVPGS--S 1234
S S R+S ++ Y Q G GR + P +R GS S
Sbjct: 261 GSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSP-SHVRHGSGSGHS 319
Query: 1235 EPFMTQGQMPNSSMQDMYNQSPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQ-- 1287
G + S + +S SG S G GQ + S GQ
Sbjct: 320 SSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGS 379
Query: 1288 YPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1347
GQ SGQ Q Y Q + RH G +H S Q +
Sbjct: 380 TSGQASSSGQHGSSSRQSSSYGQHESASRHSSG-----RGQHSS-------GSGQSPGHG 427
Query: 1348 QYGGSYSGPDRRPIQGQYPYPYSRERMQGP 1377
Q G SG + P GQ+ + R GP
Sbjct: 428 QRG---SGSGQSPSSGQHGTGFGRSSSSGP 454
>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
sapiens]
Length = 412
Score = 102 bits (253), Expect = 5e-21
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 30/347 (8%)
Query: 973 DGKEEGTPQPESKSKKSSSST-------TTGEKITKVYELGNEPERKLWVDRYLTFMEER 1025
+ EE P + S SS T E+ ++YEL +P+RK ++D +FM++R
Sbjct: 71 EAAEESRPGAQGPSSPSSQPPGLHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKR 130
Query: 1026 GSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTS-SSAASSLK 1084
G+PV+ +P + K+ LDL+ L+ V GGL +V K WRE+ L++ T+ +SAA +L+
Sbjct: 131 GTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLR 190
Query: 1085 KQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNS 1144
QY++YL+ +EC+ R P E+ + D+ ++ + A L G P G+
Sbjct: 191 TQYMKYLYPYECE-TRALSSPGELQAAIDSNRREGRRQAYTAT--PLFGLAGPPPRGAQD 247
Query: 1145 MAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPN--APY 1202
A PG P T +S Q G +S + H + +S S K S PN
Sbjct: 248 PALGPGPAPPATQSSPGPAQ------GSTSGLPAH-ACAQLSPSPIKKEESGIPNPCLAL 300
Query: 1203 QQGMSMPDVMGRM-PYEP--NKDPFGGMRKVPGSSEP--FMTQGQMP--NSSMQDMYNQS 1255
G+++ ++ P EP + G P P F+ +G++P + N +
Sbjct: 301 PVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLREERLDGPLNLA 360
Query: 1256 PSGAMS-NLGMGQRQQFPYGASYDRRHEPYGQQYPGQ--GPPSGQPP 1299
SG S N+ + G + RR Q P PPS PP
Sbjct: 361 GSGISSINMALEINGVVYTGVLFARRQPVPASQGPTNPAPPPSTGPP 407
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 99.4 bits (246), Expect = 3e-20
Identities = 95/296 (32%), Positives = 117/296 (39%), Gaps = 43/296 (14%)
Query: 66 QQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPG 125
Q++Q Q P+ + GG GGG G GG GG G S G
Sbjct: 4 QKKQPTPQPPVDCVKTSGGGGGGGGSGG--------GGCGFFGGGGSG---GGSSGSGCG 52
Query: 126 DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG- 184
G GG G G +G G GGG +++ GS+ SG
Sbjct: 53 YSGGGGYSGGGCGGGSSGGGGGGGIG---------GCGGGSGGSVKYSGGGGSSGGGSGC 103
Query: 185 -GPGGRAGPCFDQHGGQQSPG-MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS--QCNHY 240
GG CF GG S G G S ++G G + G+ QC Y
Sbjct: 104 FSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSG--GGSGCFSSGGGGFSGQAVQCQSY 161
Query: 241 PGYSRPGAGGGGGG----GGGGG---GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA- 292
G S G+ GGG G GGGGG G SGGG G GG +GG+G+G V++ + A
Sbjct: 162 GGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAP 221
Query: 293 --GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK---AAAGSAAGG 343
GGG GG S G G SS GGG G GGG + S + GS GG
Sbjct: 222 QPSYGGGSSGGGGSGGSGCFSS---GGGGGSSGCGGGSSGIGSGCIISGGGSVCGG 274
Score = 89.7 bits (221), Expect = 3e-17
Identities = 67/212 (31%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAG--AGAVAAAAAAAAAAAGGGGGGGYGGSS 304
G GGGGG GGGG G GGGG GGG+ G G G + ++GGGGGGG GG
Sbjct: 22 GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCG 81
Query: 305 AGYGVLSSPRQQGGGMMMG-------PGGGGAASLSKAAAGSAAGGFQRFA----GQNQH 353
G G S + GGG G GGGG+ S GS+ GG F+ G +
Sbjct: 82 GGSG--GSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGG 139
Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
SG + + + +SYGG SS S S G+ G +
Sbjct: 140 GSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGG-----SGCFSSGGGGGSVCGYSGGGS 194
Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
G G G G + + ++QQ + + +P
Sbjct: 195 GCGGGSSGG-----SGSGYVSSQQVTQTSCAP 221
Score = 89.0 bits (219), Expect = 5e-17
Identities = 68/227 (29%), Positives = 88/227 (38%), Gaps = 18/227 (7%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG--EPAG 139
+GG GGG+ G ++ GG+ +G + G G + G G
Sbjct: 77 IGGCGGGS---GGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGG 133
Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
G G G + GGGG + +Y G + SGG G CF GG
Sbjct: 134 GGSSGGGSGCFSS--------GGGGFSGQAVQCQSYGGVS---SGGSSGGGSGCFSSGGG 182
Query: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
S G S G+ G S + + C P Y G+ GGGG GG G
Sbjct: 183 GGSV-CGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGG-GSSGGGGSGGSGC 240
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
SGGGGG G G G +G G+ + + GG GGG GGSS G
Sbjct: 241 FSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVG 287
Score = 85.1 bits (209), Expect = 7e-16
Identities = 76/243 (31%), Positives = 94/243 (38%), Gaps = 41/243 (16%)
Query: 152 TQQPPV----AVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
T QPPV GGGGG + ++G G G G + GG G G
Sbjct: 9 TPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCG--YSGGGGYSGGGCGG 66
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGG------GGGG 261
S G G C G S +GGGG GGG GGGG
Sbjct: 67 GSSGGGGGGGIGG----------------CGGGSGGSVKYSGGGGSSGGGSGCFSSGGGG 110
Query: 262 SG----GGGG--GGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
SG GGGG GGG+G +G G ++ + ++GGGG G YG +SS
Sbjct: 111 SGCFSSGGGGSSGGGSGCFSSGGGG-SSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGS 169
Query: 316 QGGGM-MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
GGG GGGG + + GS GG + + S T Q +P P S
Sbjct: 170 SGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVT--QTSCAPQP---S 224
Query: 375 YGG 377
YGG
Sbjct: 225 YGG 227
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 98.2 bits (243), Expect = 8e-20
Identities = 157/662 (23%), Positives = 216/662 (32%), Gaps = 132/662 (19%)
Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
S G + P Y P PP P P S A+ + G M + A
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
A HP + PG G G G PM P G + P ++P S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
G P P+G G P A +P + +PP + ++
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPN-----------LPPPPALRPLNN-- 312
Query: 549 QQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
P QP P HLP P A Q M G P LAP
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS----- 355
Query: 608 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS---- 663
P SLP S S P + SS+ SA+ S+SS S+ + P S
Sbjct: 356 ---------PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406
Query: 664 --PHASPHLSSIP---------------------GGPSPSPVGSPVGSNQSRSGPISPAS 700
PH+ P +S+ G P P P G + ++ + GP P++
Sbjct: 407 SYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466
Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
G+Q PP S+ H Q Q++ Q+ GP P PHP
Sbjct: 467 --GAQSTAHPP----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHP 518
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGIS 819
GG H + S S G+ P P G PP +S V S S +GP GP + S
Sbjct: 519 LEGGSSHHA-HPYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSS 571
Query: 820 ANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPT 879
+N+ S PC + SP QG P PP+PT
Sbjct: 572 SNSSSSTSQGSYPC-------------------------SHPSPSQGPQGAPYPFPPVPT 606
Query: 880 VNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNN 927
V + + + A++ A + S PG G A S P S P
Sbjct: 607 VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFR 666
Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKS 986
+ + + P + +VG + G S LP LP G P ++
Sbjct: 667 TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQI 726
Query: 987 KK 988
K+
Sbjct: 727 KQ 728
Score = 86.3 bits (212), Expect = 3e-16
Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)
Query: 545 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 600
SG Q +PY+ PP PP Q P Q + ++P ++ GY +PP +
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204
Query: 601 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 655
PG P P P +G + P +A S G G Q
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253
Query: 656 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 711
P +P S +S G P P +PVG S P PA+ P +PP P
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308
Query: 712 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
+ S+S P L P+P G G ++ P +A P P+ S P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
+P + SS + +S + S P PA +PS +S P P +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421
Query: 821 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 870
N PS P AV P GR+ ++ PFP + + + + P +S
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Query: 871 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 930
++ Q+ Q NS G+FP P+ SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524
Query: 931 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 988
A PY+M+P S+G PG + LP P + P P S S
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573
Query: 989 SSSSTTTG 996
SSSST+ G
Sbjct: 574 SSSSTSQG 581
Score = 77.8 bits (190), Expect = 1e-13
Identities = 158/681 (23%), Positives = 204/681 (29%), Gaps = 125/681 (18%)
Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
DS++G G A P PP L P + D+ P+ +P HP + G P
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
P PGG GG + P G AA + GGP G G Q
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
P + +S+ A+GAP + P N P + H P P A
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
A A G GA + A G G GG G G + SP
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
P S +++ SAA + + S A+P +Q L S P
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
P S P+Y+ PS P PPP P + A A G G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467
Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
AQ A P QQ+ P P P L G GS+
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525
Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
H+ P SP G PPGP P + + Y Q +G P
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGP--------AHLPPPHSQVSYSQAGPNG-----------P 566
Query: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMS 587
P S QG P P P P A Y S + S
Sbjct: 567 PVSSSSNSSSSTSQGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624
Query: 588 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 647
GY T S P P + P GS TGT +G
Sbjct: 625 PAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGP 682
Query: 648 TSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
+ + P P L S+P P+ G P+ + Q + P P S +P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVP 742
Query: 708 ----PQPPGSQSESSSHPALS 724
P PP + SH + S
Sbjct: 743 PARSPSPPPKVVDVPSHASQS 763
Score = 77.8 bits (190), Expect = 1e-13
Identities = 138/623 (22%), Positives = 200/623 (32%), Gaps = 126/623 (20%)
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
GG GG G G GGG + GG G + + G G
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASG------------ 269
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
A +K GG L ++P P
Sbjct: 270 -------------------APPTKPPTTPVGGG-------------------NLPSAPPP 291
Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
++P + +P+ PPPP +P + A+A+ G Q + MG P
Sbjct: 292 ------ANFP-HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 431 AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD-PMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
++ A SP + P + PM P S+ S +SP+P
Sbjct: 345 ---GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 490 GSYGPPGPQRYP----IGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVS 545
P P +P + + + P +Y Q A W + PP YG+ +
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPP------KYTQPSLPSQAVWSQG-PPPPPPYGRLLAN 454
Query: 546 GYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDMSQEGYGTRSQPPLAP 601
G P + H P + Q QQ+ Q QQ Q+ +G PP P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--P 512
Query: 602 GK-PNHEDLNLIQQERPSSLPDLSGSIDDLPTG--------TEATLSSA-------VSAS 645
G P+ + P ++ GS+ P G ++ + S A S+S
Sbjct: 513 GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSS 572
Query: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----AS 700
S+SS S P P SP P G P P P PV + + S +S AS
Sbjct: 573 NSSSSTSQGSYPCSHP-SPSQGPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVAS 623
Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
P PPG P+ G+ G +P + G SP
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPA 680
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
PG +F+ + + GP + GP G S PP P+A S GP + +
Sbjct: 681 GPG--------TFKPGSPTVGPGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQ 725
Query: 821 NNQMHGQGPSQPCGAVPLGRMPS 843
Q + P VP R PS
Sbjct: 726 IKQEPAEEYETPESPVPPARSPS 748
Score = 70.9 bits (172), Expect = 1e-11
Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)
Query: 1104 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1149
PPP F P L PP P N+ S P +P + G P
Sbjct: 289 PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 1150 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1209
G K PT A +PH P + + P+S S SS +S + ++
Sbjct: 345 GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394
Query: 1210 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1269
+ PF + +P F + S+ Y Q + + G
Sbjct: 395 ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 1270 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1329
PYG R +PG PPS G Q +P + H H
Sbjct: 445 PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483
Query: 1330 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1389
+ Q QQQ+ Q+ G+ SGP P G +P+P ++G H
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528
Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1445
P S S G + +P P+ ++ GP GP P N +
Sbjct: 529 ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582
Query: 1446 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1492
+H S PS Q PY +SSA++ + + P +PP P +
Sbjct: 583 YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Query: 1493 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1542
RAPSP +++ + P P + T P S GP P PP
Sbjct: 641 KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 1543 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1578
P PP + AS P L Q ++ +++ TPE+
Sbjct: 701 GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739
Score = 62.4 bits (150), Expect = 5e-09
Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)
Query: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
+ G A P HHHHH QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501
Query: 73 QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
QH ++ GA GG + P P G + G QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561
Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
P GPP+ S P P G Y P + + T ++
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617
Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A V Y +A+P P G+ P SPG + G+P S
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
+ GY + PG +PG+ G G G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Score = 59.7 bits (143), Expect = 3e-08
Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)
Query: 1107 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1165
E ST KQ + + S + S P+ ++ + P DL S G
Sbjct: 60 EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119
Query: 1166 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1222
P Q RS++ S++ P S +DS S P PY P + P P+
Sbjct: 120 DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175
Query: 1223 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1280
P + P +S + + +P+G + + + F P GA
Sbjct: 176 P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213
Query: 1281 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1333
P+ Q YPG GPP G P GG + GP K+H
Sbjct: 214 -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257
Query: 1334 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1389
+ SS G + P P+ G P P + + T +PP
Sbjct: 258 TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305
Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1440
PL ++S+ P +P P+ QG G GPT AP P+ +
Sbjct: 306 ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365
Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
P R + S S + SSS+S P P+ Q PS P+ P P S
Sbjct: 366 APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417
Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
S+ N+ P LPS + GPPP PP
Sbjct: 418 L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 98.2 bits (243), Expect = 8e-20
Identities = 157/662 (23%), Positives = 216/662 (32%), Gaps = 132/662 (19%)
Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
S G + P Y P PP P P S A+ + G M + A
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
A HP + PG G G G PM P G + P ++P S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
G P P+G G P A +P + +PP + ++
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPN-----------LPPPPALRPLNN-- 312
Query: 549 QQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
P QP P HLP P A Q M G P LAP
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS----- 355
Query: 608 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS---- 663
P SLP S S P + SS+ SA+ S+SS S+ + P S
Sbjct: 356 ---------PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406
Query: 664 --PHASPHLSSIP---------------------GGPSPSPVGSPVGSNQSRSGPISPAS 700
PH+ P +S+ G P P P G + ++ + GP P++
Sbjct: 407 SYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466
Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
G+Q PP S+ H Q Q++ Q+ GP P PHP
Sbjct: 467 --GAQSTAHPP----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHP 518
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGIS 819
GG H + S S G+ P P G PP +S V S S +GP GP + S
Sbjct: 519 LEGGSSHHA-HPYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSS 571
Query: 820 ANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPT 879
+N+ S PC + SP QG P PP+PT
Sbjct: 572 SNSSSSTSQGSYPC-------------------------SHPSPSQGPQGAPYPFPPVPT 606
Query: 880 VNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNN 927
V + + + A++ A + S PG G A S P S P
Sbjct: 607 VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFR 666
Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKS 986
+ + + P + +VG + G S LP LP G P ++
Sbjct: 667 TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQI 726
Query: 987 KK 988
K+
Sbjct: 727 KQ 728
Score = 86.3 bits (212), Expect = 3e-16
Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)
Query: 545 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 600
SG Q +PY+ PP PP Q P Q + ++P ++ GY +PP +
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204
Query: 601 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 655
PG P P P +G + P +A S G G Q
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253
Query: 656 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 711
P +P S +S G P P +PVG S P PA+ P +PP P
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308
Query: 712 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
+ S+S P L P+P G G ++ P +A P P+ S P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
+P + SS + +S + S P PA +PS +S P P +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421
Query: 821 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 870
N PS P AV P GR+ ++ PFP + + + + P +S
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Query: 871 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 930
++ Q+ Q NS G+FP P+ SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524
Query: 931 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 988
A PY+M+P S+G PG + LP P + P P S S
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573
Query: 989 SSSSTTTG 996
SSSST+ G
Sbjct: 574 SSSSTSQG 581
Score = 77.8 bits (190), Expect = 1e-13
Identities = 158/681 (23%), Positives = 204/681 (29%), Gaps = 125/681 (18%)
Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
DS++G G A P PP L P + D+ P+ +P HP + G P
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
P PGG GG + P G AA + GGP G G Q
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
P + +S+ A+GAP + P N P + H P P A
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
A A G GA + A G G GG G G + SP
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
P S +++ SAA + + S A+P +Q L S P
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
P S P+Y+ PS P PPP P + A A G G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467
Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
AQ A P QQ+ P P P L G GS+
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525
Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
H+ P SP G PPGP P + + Y Q +G P
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGP--------AHLPPPHSQVSYSQAGPNG-----------P 566
Query: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMS 587
P S QG P P P P A Y S + S
Sbjct: 567 PVSSSSNSSSSTSQGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624
Query: 588 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 647
GY T S P P + P GS TGT +G
Sbjct: 625 PAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGP 682
Query: 648 TSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
+ + P P L S+P P+ G P+ + Q + P P S +P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVP 742
Query: 708 ----PQPPGSQSESSSHPALS 724
P PP + SH + S
Sbjct: 743 PARSPSPPPKVVDVPSHASQS 763
Score = 77.8 bits (190), Expect = 1e-13
Identities = 138/623 (22%), Positives = 200/623 (32%), Gaps = 126/623 (20%)
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
GG GG G G GGG + GG G + + G G
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASG------------ 269
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
A +K GG L ++P P
Sbjct: 270 -------------------APPTKPPTTPVGGG-------------------NLPSAPPP 291
Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
++P + +P+ PPPP +P + A+A+ G Q + MG P
Sbjct: 292 ------ANFP-HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 431 AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD-PMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
++ A SP + P + PM P S+ S +SP+P
Sbjct: 345 ---GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 490 GSYGPPGPQRYP----IGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVS 545
P P +P + + + P +Y Q A W + PP YG+ +
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPP------KYTQPSLPSQAVWSQG-PPPPPPYGRLLAN 454
Query: 546 GYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDMSQEGYGTRSQPPLAP 601
G P + H P + Q QQ+ Q QQ Q+ +G PP P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--P 512
Query: 602 GK-PNHEDLNLIQQERPSSLPDLSGSIDDLPTG--------TEATLSSA-------VSAS 645
G P+ + P ++ GS+ P G ++ + S A S+S
Sbjct: 513 GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSS 572
Query: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----AS 700
S+SS S P P SP P G P P P PV + + S +S AS
Sbjct: 573 NSSSSTSQGSYPCSHP-SPSQGPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVAS 623
Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
P PPG P+ G+ G +P + G SP
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPA 680
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
PG +F+ + + GP + GP G S PP P+A S GP + +
Sbjct: 681 GPG--------TFKPGSPTVGPGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQ 725
Query: 821 NNQMHGQGPSQPCGAVPLGRMPS 843
Q + P VP R PS
Sbjct: 726 IKQEPAEEYETPESPVPPARSPS 748
Score = 70.9 bits (172), Expect = 1e-11
Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)
Query: 1104 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1149
PPP F P L PP P N+ S P +P + G P
Sbjct: 289 PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 1150 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1209
G K PT A +PH P + + P+S S SS +S + ++
Sbjct: 345 GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394
Query: 1210 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1269
+ PF + +P F + S+ Y Q + + G
Sbjct: 395 ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 1270 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1329
PYG R +PG PPS G Q +P + H H
Sbjct: 445 PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483
Query: 1330 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1389
+ Q QQQ+ Q+ G+ SGP P G +P+P ++G H
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528
Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1445
P S S G + +P P+ ++ GP GP P N +
Sbjct: 529 ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582
Query: 1446 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1492
+H S PS Q PY +SSA++ + + P +PP P +
Sbjct: 583 YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Query: 1493 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1542
RAPSP +++ + P P + T P S GP P PP
Sbjct: 641 KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 1543 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1578
P PP + AS P L Q ++ +++ TPE+
Sbjct: 701 GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739
Score = 62.4 bits (150), Expect = 5e-09
Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)
Query: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
+ G A P HHHHH QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501
Query: 73 QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
QH ++ GA GG + P P G + G QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561
Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
P GPP+ S P P G Y P + + T ++
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617
Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A V Y +A+P P G+ P SPG + G+P S
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
+ GY + PG +PG+ G G G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Score = 59.7 bits (143), Expect = 3e-08
Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)
Query: 1107 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1165
E ST KQ + + S + S P+ ++ + P DL S G
Sbjct: 60 EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119
Query: 1166 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1222
P Q RS++ S++ P S +DS S P PY P + P P+
Sbjct: 120 DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175
Query: 1223 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1280
P + P +S + + +P+G + + + F P GA
Sbjct: 176 P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213
Query: 1281 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1333
P+ Q YPG GPP G P GG + GP K+H
Sbjct: 214 -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257
Query: 1334 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1389
+ SS G + P P+ G P P + + T +PP
Sbjct: 258 TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305
Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1440
PL ++S+ P +P P+ QG G GPT AP P+ +
Sbjct: 306 ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365
Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
P R + S S + SSS+S P P+ Q PS P+ P P S
Sbjct: 366 APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417
Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
S+ N+ P LPS + GPPP PP
Sbjct: 418 L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 96.7 bits (239), Expect = 2e-19
Identities = 237/1002 (23%), Positives = 306/1002 (30%), Gaps = 202/1002 (20%)
Query: 93 GPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDDAPPKMGEPAGGRYEHPG 146
GP ++ G G+ PPG P L PGD P G+ G PG
Sbjct: 429 GPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDK--GSSGIPG 486
Query: 147 LGALGTQQPPVAVPGGGGGPAAV----PE-FNNYY------------GSAAPASGGPG-- 187
G + V G G P V PE F N+ G PA G PG
Sbjct: 487 KEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQ 546
Query: 188 ---GRAG-PCFD-------QH--------GGQQSPGMGMM----------------HSAS 212
G G PC QH G SPG G+ +
Sbjct: 547 GIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGE 606
Query: 213 AAAAGAPGSMDPLQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGA 271
A AG+PG P+ + +G C P S G G G G G G
Sbjct: 607 AGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGF 666
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA- 330
G G A AG G G G++ G+ P QG G G G
Sbjct: 667 GLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTA 726
Query: 331 --SLSKAAAGSAAGGFQRFAGQNQHPSG----------------ATPTLNQLLTSPSPMM 372
SL A Q Q P G P L + P P
Sbjct: 727 CPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPG 786
Query: 373 RSYGGSYPEYSSPS-----------APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM 421
R G E +P PP P + +Q + A G G +
Sbjct: 787 RGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPP 846
Query: 422 GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
G P G PG SQG + + P L+ MGS+ P
Sbjct: 847 GRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLW-MGSSWQPGP 905
Query: 482 QQSSPYPGGSYGPPGPQRYPIGIQG--------RTPGAMAGM------QYPQQQDSGDAT 527
Q P G GPPGP P G+QG PG A + Q+ + GD
Sbjct: 906 QG----PPGIPGPPGPPGVP-GLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCV 960
Query: 528 WKET----FWLMPPQYGQQGVSGY-----CQQG----QQPYYSQQ--------------- 559
+ + + + G QG+ G C Q ++P +
Sbjct: 961 QGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSP 1020
Query: 560 --PQPPHLPPQ-AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQER 616
P PP LP Q + P + P + G+ P PG L + ++
Sbjct: 1021 GLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDK 1080
Query: 617 ----PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 672
P P G+ P G L G T S G++ P P S L
Sbjct: 1081 GEPGPPGQPGYPGATG--PPG----LPGIKGERGYTGSAGEKGEP-----GPPGSEGLPG 1129
Query: 673 IPGGPSPSPVGSPVGSNQSRS-----------GPISPASIPGSQMPPQPPGSQSESSSHP 721
PG P P G++ + GP P PG P PPG Q+E S
Sbjct: 1130 PPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEG 1189
Query: 722 ALSQSPMPQERG--FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMH-AGISSFQ-QSN 777
S +P G G Q + + P + P P G G F+ ++
Sbjct: 1190 IRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTG 1249
Query: 778 SSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISANNQMHGQGPSQPC 833
G GP+ + GP G+ RP A G P A PGP + GP+
Sbjct: 1250 HPGLPGPKGDCGKPGPPGSTGRPGA-EGEPGAMGPQGRPGPPGHVGPPGPPGQPGPA-GI 1307
Query: 834 GAVPL-------GRMPSAGMQNRPFPGNMSSMTPSSPG----MSQQGGPG----MGPPMP 878
AV L G AG+ +P P P PG ++G PG GPP P
Sbjct: 1308 SAVGLKGDRGATGERGLAGLPGQPGPPGHPG-PPGEPGTDGAAGKEGPPGKQGFYGPPGP 1366
Query: 879 TVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP 920
K AA Q + R G G +SG M P
Sbjct: 1367 ----KGDPGAAG--QKGQAGEKGRAGMPGGPGKSGSMGPVGP 1402
Score = 72.0 bits (175), Expect = 6e-12
Identities = 124/479 (25%), Positives = 142/479 (29%), Gaps = 76/479 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------------SKPGDEDD- 129
G G PGP E+ G S G PPGPP + KPG D
Sbjct: 1171 GKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDP 1230
Query: 130 ---APPKMGEPAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
PP + P G G+ HPGL G G P PG G P A E P +
Sbjct: 1231 GPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKP-GPPGSTGRPGAEGE---------PGA 1280
Query: 184 GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL-QNSHEGYPNSQCNHYPG 242
GP GR GP H G P G A +A G G + G P PG
Sbjct: 1281 MGPQGRPGP--PGHVGPPGP-PGQPGPAGISAVGLKGDRGATGERGLAGLPGQP--GPPG 1335
Query: 243 YSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
+ P G G G G G G G G G A A AG GG G G
Sbjct: 1336 HPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSG 1395
Query: 303 SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG--GFQRFAGQNQHPSGATPT 360
S G ++G GP G + G +RF Q
Sbjct: 1396 SMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERM 1455
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----- 415
PM + P P P P S G+Q G+
Sbjct: 1456 AYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPG 1515
Query: 416 --GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
G D+G A + PG PGP QG P YG
Sbjct: 1516 TKGEKGDIGIGIAGENGL-------------PGPPGP-----QGPPG----------YGK 1547
Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETF 532
QQ P G GPPGP P P G +QQ T K F
Sbjct: 1548 MGATGPMGQQGIP---GIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPF 1603
Score = 68.9 bits (167), Expect = 5e-11
Identities = 180/807 (22%), Positives = 226/807 (28%), Gaps = 179/807 (22%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPG--------------DEDD 129
G G PGP E+ G A G PPG + PG E
Sbjct: 806 GLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKG 865
Query: 130 APPKMGEPA------------GGRYEHPGLGALGTQQP-PVAVPG--GGGGPAAVPEFNN 174
+ GEP G PGL + QP P PG G GP VP
Sbjct: 866 PRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQG 925
Query: 175 YYG-SAAPASGG-----------------------PGGRAGPCF----DQHGGQQSPGM- 205
G + P G G RA P + + G Q PG+
Sbjct: 926 VPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVP 985
Query: 206 ---------------------GMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHY 240
G G+PG P Q EG P + +
Sbjct: 986 GLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPG 1045
Query: 241 P--GYSRPGAGGGGGGGG--GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
P PG G G G G G G G G G G A G G
Sbjct: 1046 PPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKG 1105
Query: 297 GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS- 355
GY GS+ G P + G+ PG G S G Q F GQ P
Sbjct: 1106 ERGYTGSAGEKGEPGPPGSE--GLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGP 1163
Query: 356 GATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM 415
P + SP P PS P P P A G G
Sbjct: 1164 PGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGK 1223
Query: 416 -GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
GL D G A P PG PGP G P P RP G
Sbjct: 1224 PGLRGDPG---PAGPPGLMGPPGFKGKTGHPGLPGPK--GDCGKPGPPGSTGRP---GAE 1275
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYP-------IGIQG--------------RTPGAMA 513
P + Q P P G GPPGP P +G++G PG
Sbjct: 1276 GEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPG 1335
Query: 514 GMQYPQQQDSGDATWKE------TFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPP 567
P + + A KE F+ P G G +G Q + + P P
Sbjct: 1336 HPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPG--- 1392
Query: 568 QAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKP----------NHEDLNLIQQERP 617
S S P + G+ P +PG P N++++ ++
Sbjct: 1393 -----KSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEI 1447
Query: 618 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSP-----------HA 666
+ D + +++A G G P +P SP
Sbjct: 1448 IKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-APGSPGLPGQIGREGRQG 1506
Query: 667 SPHLSSIPG-------------------GPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
P + +PG GP P P G P +GP+ IPG P
Sbjct: 1507 LPGVRGLPGTKGEKGDIGIGIAGENGLPGP-PGPQGPPGYGKMGATGPMGQQGIPGIPGP 1565
Query: 708 PQP---PGSQSESSSHPALSQSPMPQE 731
P P PG + PM Q+
Sbjct: 1566 PGPMGQPGKAGHCNPSDCFGAMPMEQQ 1592
Score = 66.6 bits (161), Expect = 3e-10
Identities = 178/785 (22%), Positives = 246/785 (31%), Gaps = 136/785 (17%)
Query: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
P G G G G G GG G G G G G G G +
Sbjct: 388 PSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAG 447
Query: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA----------GGFQRFAGQNQHPS 355
G P G G+ PG G K GS+ G G+ P
Sbjct: 448 EPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPC 507
Query: 356 GATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQ---------AAAAGA 404
PTL P G G P P P P Q + +
Sbjct: 508 EVCPTL------PEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSS 561
Query: 405 AAGGQQAAAGMGLGKDMGA--------QYAAASPAWAAAQ---QRSHPAMSPGTPGPT-- 451
G Q + G D+G+ A P + + PA SPG PGP
Sbjct: 562 VVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGP 621
Query: 452 --MGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
+ ++G P +P P L + + P P G G PGP + G+ G+
Sbjct: 622 AGIKGAKGEPCEPC----PALSNLQDG--DVRVVALPGPSGEKGEPGPPGF--GLPGKQG 673
Query: 510 GAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQ 568
A Q+ D+G+ T P G+ G+SG QG ++ P
Sbjct: 674 KAGERGLKGQKGDAGNPGDPGT----PGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPS 729
Query: 569 AQYLPSQSQQR---YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSG 625
Q + R P+ + EG G PGKP LP + G
Sbjct: 730 LQGTVTDMAGRPGQPGPKGEQGPEGVG-------RPGKPGQ-----------PGLPGVQG 771
Query: 626 SIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSP 685
P G + G G Q P +P L I G P P P
Sbjct: 772 -----PPGLK----------GVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGP 816
Query: 686 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 745
G ++ P + G+ P PPG+ S S P G T
Sbjct: 817 TGEKGAQGSP----GVKGATGPVGPPGA----------SVSGPPGRDGQQGQTGLRGTPG 862
Query: 746 QYGP--QQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG 803
+ GP ++ P PS G + +G+ + G + Q GPQG PP G
Sbjct: 863 EKGPRGEKGEPGECSCPSQGDLIFSGM-----PGAPGLWMGSSWQPGPQG----PPGIPG 913
Query: 804 VPSASYSGPG-PGM-GISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 861
P PG PG+ G+ NN + P QP LG +P + G+ +
Sbjct: 914 PPGP----PGVPGLQGVPGNNGL----PGQPGLTAELGSLPIEQHLLKSICGDCVQGQRA 965
Query: 862 SPG----MSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG-MNQSGLMA 916
PG ++G G+ P +P ++ AQ + A + PG + GL
Sbjct: 966 HPGYLVEKGEKGDQGI-PGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPG 1024
Query: 917 SSS-PYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGK 975
P + + + PP + P + S GL + GE L L D
Sbjct: 1025 PPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQ--GERGL-TGLTGDKG 1081
Query: 976 EEGTP 980
E G P
Sbjct: 1082 EPGPP 1086
Score = 44.3 bits (103), Expect = 0.001
Identities = 58/196 (29%), Positives = 67/196 (34%), Gaps = 41/196 (20%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAG- 139
L G G +PGP + G + A G PGPP + PG PP PAG
Sbjct: 1253 LPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPG-----PPGQPGPAGI 1307
Query: 140 ---------GRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAAPA 182
G GL L Q P PG G G P +YG P
Sbjct: 1308 SAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGP- 1366
Query: 183 SGGPG-----GRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQC 237
G PG G+AG + G PG G S S G PG + H G P
Sbjct: 1367 KGDPGAAGQKGQAG----EKGRAGMPG-GPGKSGSMGPVGPPGPAG--ERGHPGAPGPSG 1419
Query: 238 NHYPGYSRPGAGGGGG 253
+ PG PG G G
Sbjct: 1420 S--PGL--PGVPGSMG 1431
Score = 33.9 bits (76), Expect = 1.8
Identities = 77/327 (23%), Positives = 109/327 (33%), Gaps = 66/327 (20%)
Query: 1123 PSPANSGSLQGPQ-TPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1181
P P G +QGPQ P + G + +PG PP P Q +P G + +T V P
Sbjct: 782 PGPPGRG-VQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSP--GVKGATGPVGPP 838
Query: 1182 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1241
+ VS P QQG + G+R PG P +G
Sbjct: 839 GASVSG---------PPGRDGQQGQT------------------GLRGTPGEKGPRGEKG 871
Query: 1242 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1301
+ S + SG G+ G+S+ +P Q PG P G P
Sbjct: 872 EPGECSCPSQGDLIFSGMPGAPGLWM------GSSW----QPGPQGPPGIPGPPGPPGVP 921
Query: 1302 GHQ--PGL--YPQQPNYKRHMDGMYGPPAKRH----------EGDMYNMQYSSQQQEMYN 1347
G Q PG P QP + + P ++H +G + Y ++ E +
Sbjct: 922 GLQGVPGNNGLPGQPGLTAELGSL---PIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGD 978
Query: 1348 QYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMW 1407
Q G D Q R R + + G P G + S GP
Sbjct: 979 QGIPGVPGLDN---CAQCFLSLERPRAEEARGDNSEGDP-----GCVGSPGLPGPPGLPG 1030
Query: 1408 AARNDMPYPYQNRQGPGGPTQAPPYPG 1434
+ P + GP GP P +PG
Sbjct: 1031 QRGEEGPPGMRGSPGPPGPIGPPGFPG 1057
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 95.1 bits (235), Expect = 7e-19
Identities = 245/986 (24%), Positives = 313/986 (31%), Gaps = 168/986 (17%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAG----GQADPPGPPLLSKP-GDED-DAPPKMGEP 137
G G A PG Q G K G PGPP P G E D PP +
Sbjct: 635 GDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGL 694
Query: 138 AG--GRYEHPGL-GALGTQQPP-----VAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGR 189
G G PG+ G LG Q PP PG GG P E P GP G+
Sbjct: 695 RGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGK 754
Query: 190 AGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-------------PLQNSHEGYPNSQ 236
GP G P G PG P + G P +
Sbjct: 755 DGP-----NGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGA- 808
Query: 237 CNHYPGYSRPGAGGGGGGGGGGG--GGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAG 293
PG+ PG G G G G G G G G G AG AG + +
Sbjct: 809 ----PGF--PGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPR 862
Query: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
G G G G+ P QG +GP G +K G A G AG
Sbjct: 863 MPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEG--AHGAPGAAGNPGA 920
Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
P + PS PP P + G++ AA
Sbjct: 921 P-----------------------GHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAA 957
Query: 414 G----MGLGKDMGAQYAAASPAWAAAQQRSHPAM--SPGTPGP-----TMGRSQGS---P 459
G G G A P + P + SPG PGP G+ +GS
Sbjct: 958 GEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCA 1017
Query: 460 MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGA--MAGMQY 517
+ +K + G P S + P G + GPPGP P G +G +PG+ + G
Sbjct: 1018 LGGQCVKGDR--GAPGIPGSPGSRGDPGIGVA-GPPGPSG-PPGDKG-SPGSRGLPGFPG 1072
Query: 518 PQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ------PQPPHLPPQAQY 571
PQ D PP G+ G+S G ++ P PP LP
Sbjct: 1073 PQGPAGRDGAPGNPGERGPP--GKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPG---- 1126
Query: 572 LPSQSQQRYQPQQDMSQ--EGYGTRSQPPLAPGKPNHEDLNLIQQER----------PSS 619
LP + P + + EG + PP PG P Q ER
Sbjct: 1127 LPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQG 1186
Query: 620 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA-QSPFSPHASPHLSSIPG--- 675
P + G + P G A +G+ G Q +P + P P L IPG
Sbjct: 1187 HPGVPGFMG--PPGNPGP-PGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEG 1243
Query: 676 ----GPSPSPVGSPVGSNQ----SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP 727
P P G P + + G P G PG + ES + Q
Sbjct: 1244 KEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEG 1303
Query: 728 MPQERGFMAGT-QRNPQMAQYGPQQTGPSMSP-HPSPGGQMHAGISSFQQSNSSGTYG-P 784
+P + G T + PQ + P + G SP P P G + Q S G G P
Sbjct: 1304 LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSG-------TPGQKGSKGENGSP 1356
Query: 785 QMSQY-GPQGNYSRP-----PAYSGVP----SASYSGPGPGMGISANNQMHGQGPSQPCG 834
+ + GP+G P P GVP + G GI + G G QP
Sbjct: 1357 GLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPG-GKGQPGD 1415
Query: 835 AVPLGRMPSAGMQN-RPFPGNMSSMTPSSPGMSQQGGPGM---GPPMPTVNRKAQE---- 886
G G+ + PG + P P Q G PG+ P M T+ R QE
Sbjct: 1416 PGIPGHKGHTGLMGPQGLPGENGPVGPPGP-PGQPGFPGLRGESPSMETLRRLIQEELGK 1474
Query: 887 --------AAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLMNTQAP 937
A + A S+Q R G + GL + P +P L P
Sbjct: 1475 QLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP 1534
Query: 938 --PYSMAPAMVNSSAASVGLADMMSP 961
P A + A VGL M P
Sbjct: 1535 IGPKGERGAKGDPGAPGVGLRGEMGP 1560
Score = 80.1 bits (196), Expect = 2e-14
Identities = 155/664 (23%), Positives = 202/664 (30%), Gaps = 149/664 (22%)
Query: 84 GAGGGAPQPG----PDMEQPQHGGAKDSAAG--GQADPPGPPLLSK---PGDED------ 128
G G PG P PQ +D A G G+ PPG P LS PGD +
Sbjct: 1054 GPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113
Query: 129 --DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186
D PP PGL L + VPG G + + P GP
Sbjct: 1114 CNDCPPGP----------PGLPGLPGFKGDKGVPGKPGREGTEGKKGE---AGPPGLPGP 1160
Query: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRP 246
G AGP S GA G + Q +G+P PG+ P
Sbjct: 1161 PGIAGP-----------------QGSQGERGADGEVG--QKGDQGHPG-----VPGFMGP 1196
Query: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
G G G G +G G G G G + G G G G
Sbjct: 1197 PGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE 1256
Query: 307 YGVLSSPRQQGGGMMMGPGG-GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
G P G GP G G S A G GQ P T
Sbjct: 1257 PGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDT----- 1311
Query: 366 TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----GLGKDM 421
P+ G P+ P PP P S + GQ+ + G GL +
Sbjct: 1312 -GPT------GPQGPQ--GPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFL 1362
Query: 422 GAQYAAASPAWAAAQQRSHPAMSPGTPG-------PTMGRSQGSPMDPMVMKRPQLYGMG 474
G + P + PG PG P + +G P P + G
Sbjct: 1363 GPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHK 1422
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYP--IGIQGRTPGAMAGMQYPQQQDSGDATWKETF 532
+ Q P G GPPGP P G++G +P +M ++ Q++ G
Sbjct: 1423 GHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESP-SMETLRRLIQEELGKQLETRLA 1481
Query: 533 WL---MPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
+L MPP Y + QG+ P PP P ++
Sbjct: 1482 YLLAQMPPAYMKSS------QGR-------PGPPGPP--------------------GKD 1508
Query: 590 GYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTS 649
G R+ P PG+P L E PS + G
Sbjct: 1509 GLPGRAGPMGEPGRPGQGGL-----EGPSG---------------------PIGPKGERG 1542
Query: 650 SQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSP-VGSNQSRSGPISPASIPGSQMPP 708
++GD P P + PG P + G P + Q +GP +PG PP
Sbjct: 1543 AKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPG---PP 1599
Query: 709 QPPG 712
PPG
Sbjct: 1600 GPPG 1603
Score = 79.7 bits (195), Expect = 3e-14
Identities = 205/871 (23%), Positives = 262/871 (30%), Gaps = 163/871 (18%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-----------KPGD-----E 127
G G G E G D G+A P GPP L PG+ E
Sbjct: 813 GVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGE 872
Query: 128 DDAPPKMGEPAGGRYEHPG-LGALGTQQPPVA--------VPGGGGGPAAVPEFNNYYGS 178
P GEP G PG LG G PP A PG G P A S
Sbjct: 873 KGDPGLPGEP--GLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 930
Query: 179 AAPAS-GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQC 237
P S G PG R P D G++ +A G+PG + P G P +
Sbjct: 931 GPPGSVGAPGLRGTPGKDGERGEKG---------AAGEEGSPGPVGP-----RGDPGA-- 974
Query: 238 NHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
PG PG G G G G GS G G G A A G G
Sbjct: 975 ---PGL--PGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGA 1029
Query: 298 GGYGGSSA-----GYGVLSSPRQQGG-GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN 351
G GS G GV P G G PG G + G G+
Sbjct: 1030 PGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGER 1089
Query: 352 QHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQA 411
P P L+ LL SP + + PP PP P G+
Sbjct: 1090 GPPG--KPGLSSLL-SPGDI-----NLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPG 1141
Query: 412 AAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMS-------------PGTPGPTMGRSQGS 458
G K P A Q S PG PG G
Sbjct: 1142 REGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPG-----FMGP 1196
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
P +P + G P Q SP G GPPGPQ P G+ G + G +
Sbjct: 1197 PGNPGPPGADGIAGAAGPPGIQ---GSP---GKEGPPGPQG-PSGLPG-----IPGEEGK 1244
Query: 519 QQQDS-----GDATWKETFWLMPPQ--YGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY 571
+ +D G+ L P+ G G G+ P + LP Q +
Sbjct: 1245 EGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQ-EG 1303
Query: 572 LPSQSQQRYQ--PQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDD 629
LP + PQ G ++ P +PG+P PS P GS +
Sbjct: 1304 LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPG-----------PSGTPGQKGSKGE 1352
Query: 630 LPTGTEATLSSAVSASGSTSSQGDQSNPAQS--PFSPHASPHLSSIPGGPS-------PS 680
L + G G++ P + P P P G P P
Sbjct: 1353 ---NGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDPGIKGDKGPPG 1408
Query: 681 PVGSP----VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP--------M 728
G P + ++ +G + P +PG P PPG + +SP +
Sbjct: 1409 GKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLI 1468
Query: 729 PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
+E G T+ +AQ P S PG G+ +
Sbjct: 1469 QEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP---------------GR 1513
Query: 789 YGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN 848
GP G R P G+ GP I + +G G G M G+
Sbjct: 1514 AGPMGEPGR-PGQGGL-------EGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPG 1565
Query: 849 RP-FPGNMSSMTPSSPGMSQQGGPGMGPPMP 878
+P PG P PG + GP P +P
Sbjct: 1566 QPGEPGYAKDGLPGIPGPQGETGPAGHPGLP 1596
Score = 58.5 bits (140), Expect = 7e-08
Identities = 131/543 (24%), Positives = 162/543 (29%), Gaps = 89/543 (16%)
Query: 388 PPPPPSQPQSQAA-----------AAGAAAGGQQAAAG-MGLGKDMGAQYAAASPAWAAA 435
PPPPP +P + + + A G+ AG MGL G A P A
Sbjct: 453 PPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKG-DIGAIGPVGAPG 511
Query: 436 QQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP 495
+ + G G +GS P R GM P + P G GP
Sbjct: 512 PKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQ 571
Query: 496 GPQRYPIGIQGRT--PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
GP P G GR PG + + F P GQQG G
Sbjct: 572 GPPGLP-GPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAG- 629
Query: 554 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 613
P + P PP Q + Q G+ PP A G E
Sbjct: 630 PQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEG----- 684
Query: 614 QERPSSLPDLSGSIDDL-PTGTEATLSSAVSASGSTSSQGDQSNPA-QSPFSPHASPHLS 671
++ P L L G D+ P G L QG P P P SP L
Sbjct: 685 RDGPPGLQGLRGKKGDMGPPGIPGLLGL----------QGPPGPPGVPGPPGPGGSPGLP 734
Query: 672 S---IPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPM 728
PG P P GP P G PP PPG++ E
Sbjct: 735 GEIGFPGKPGPP-------------GPTGPPGKDGPNGPPGPPGTKGE------------ 769
Query: 729 PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
P ERG + + G Q PG + AG+ G G + Q
Sbjct: 770 PGERGEDGLPGKPGLRGEIGEQGLA------GRPGEKGEAGLPG--APGFPGVRGEKGDQ 821
Query: 789 YGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN 848
G +G P +GP G+ + P P P G G+
Sbjct: 822 -GEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGL-- 878
Query: 849 RPFPGNMSSMTPSSPGMSQQGGPG-MGPPMPT--VNRKAQEAAAAVMQAAANSAQSRQGS 905
P PG+ QG PG +GP PT K QE A AA N
Sbjct: 879 -----------PGEPGL--QGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVG 925
Query: 906 FPG 908
PG
Sbjct: 926 APG 928
Score = 57.4 bits (137), Expect = 2e-07
Identities = 123/510 (24%), Positives = 158/510 (30%), Gaps = 80/510 (15%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
+ G G + G D E Q G G PPG P PG + A G
Sbjct: 1163 IAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNP--GPPGADGIA---------GA 1211
Query: 142 YEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYG----SAAPASGGPGGRAG-PCFD 195
PG+ G+ G + PP G GP+ +P G P G G+AG P
Sbjct: 1212 AGPPGIQGSPGKEGPP-----GPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLP 1266
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPL-QNSHEGYPNSQCNHYP-GYSRPGAGGGGG 253
G + P H+ + A G G + EG P + P G P G
Sbjct: 1267 GPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPP 1326
Query: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
G G G G G G G G+ + G G G G GV P
Sbjct: 1327 GKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP 1386
Query: 314 RQQG-GGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMM 372
+ G G PG G G G G H L P +
Sbjct: 1387 GEPGFKGERGDPGIKGDKG---PPGGKGQPGDPGIPGHKGHTG---------LMGPQGL- 1433
Query: 373 RSYGGSYPEYSSPSAPPPPPSQP-----QSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
P + P PP PP QP + ++ + Q G L + A
Sbjct: 1434 -------PGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQ 1486
Query: 428 ASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG-----SNP----- 477
PA+ + Q PG PGP G P M P G G S P
Sbjct: 1487 MPPAYMKSSQG-----RPGPPGPP--GKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKG 1539
Query: 478 --HSQPQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
++ +P G G GPPG P G G + G+ P Q ++G A
Sbjct: 1540 ERGAKGDPGAPGVGLRGEMGPPGIPGQP-GEPGYAKDGLPGIPGP-QGETGPAG------ 1591
Query: 534 LMPPQYGQQGVSGYCQQGQQPYYSQQPQPP 563
P G G G C Q Y++ P
Sbjct: 1592 -HPGLPGPPGPPGQCDPSQCAYFASLAARP 1620
Score = 39.7 bits (91), Expect = 0.033
Identities = 51/193 (26%), Positives = 65/193 (33%), Gaps = 41/193 (21%)
Query: 56 QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115
Q++ +Q + + Q P + S G G PG D + G + GQ
Sbjct: 1469 QEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGL 1528
Query: 116 PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNY 175
GP P E A G+P PG+G G PP +PG G P Y
Sbjct: 1529 EGPSGPIGPKGERGA---KGDPGA-----PGVGLRGEMGPP-GIPGQPGEP-------GY 1572
Query: 176 YGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
P GP G GP H G P G PG DP S
Sbjct: 1573 AKDGLPGIPGPQGETGPA--GHPGLPGP------------PGPPGQCDP----------S 1608
Query: 236 QCNHYPGY-SRPG 247
QC ++ +RPG
Sbjct: 1609 QCAYFASLAARPG 1621
Score = 35.8 bits (81), Expect = 0.47
Identities = 68/293 (23%), Positives = 87/293 (29%), Gaps = 70/293 (23%)
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP---------------PL 120
+ L G G GP Q G + + G PGP P
Sbjct: 1298 LPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPG 1357
Query: 121 L----------SKPGD-----EDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG 165
L +PG+ ++ P K GEP G + E G G + P PGG G
Sbjct: 1358 LPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEP-GFKGERGDPGIKGDKGP----PGGKGQ 1412
Query: 166 PA--AVPEFNNYYG----SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
P +P + G P GP G GP G PG+ G
Sbjct: 1413 PGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGP----PGQPGFPGL----------RGES 1458
Query: 220 GSMDPLQNSHEGYPNSQCNHYPGY--------------SRPGAGGGGGGGG-GGGGGSGG 264
SM+ L+ + Q Y RPG G G G G G G
Sbjct: 1459 PSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMG 1518
Query: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG 317
G G G +G + A G G G G G+ P + G
Sbjct: 1519 EPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPG 1571
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 94.7 bits (234), Expect = 9e-19
Identities = 221/878 (25%), Positives = 283/878 (32%), Gaps = 199/878 (22%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G GGA GP E G + G PPG KPG++ GEP GR
Sbjct: 226 LQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPG-----KPGED-------GEP--GR 271
Query: 142 YEHPG-LGALGTQQPPVAVPGGGGGPAA--VPEFNNYYGS----------AAPASGGPGG 188
+PG +G G+ PG G P A +P + G AP S G G
Sbjct: 272 NGNPGEVGFAGS-------PGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAG 324
Query: 189 RAGPC--------------FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
GP + G Q +PG H G PG M PL G P
Sbjct: 325 PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAH----GMPGKPGPMGPL-----GIPG 375
Query: 235 SQCNHYPGYSRPGAGGGGG--GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
S + +PG PG G G G G G G G G G G+ A A
Sbjct: 376 S--SGFPG--NPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAK 431
Query: 293 GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
G G G G G SP QG GP G + GF+ AG
Sbjct: 432 GPTGSPGTSGPPGSAGPPGSPGPQGS---TGPQG-----IRGQPGDPGVPGFKGEAGPKG 483
Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
P + P G P + PP P G++ A
Sbjct: 484 EPG------PHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV--------------GERGA 523
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G + G + P AQ P S G G SQG P P P G
Sbjct: 524 PG-----NRGFPGSDGLPGPKGAQGERGPVGSSGPKG-----SQGDPGRPGEPGLPGARG 573
Query: 473 MGSNPHSQPQQ------SSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
+ NP Q + +P G GPPG IGI+G+ PG+M G+ P + SGD
Sbjct: 574 LTGNPGVQGPEGKLGPLGAPGEDGRPGPPG----SIGIRGQ-PGSM-GLPGP-KGSSGD- 625
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ--PQPPHLPPQAQYLPSQSQQRYQPQQ 584
P + G+ G +G Q P + P P PP + + P
Sbjct: 626 ---------PGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGL----AGERGEQGPPG 672
Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA 644
+G PP GKP + +P G++ L E
Sbjct: 673 PTGFQGLPGPPGPPGEGGKPGDQ-----------GVPGDPGAVGPLGPRGERGNPGERGE 721
Query: 645 SGSTSSQGDQSNP-AQSPFSPHASPHLSSIPG--GP--------------SPSPVGSPVG 687
G T G++ P P SP S PG GP +P P G G
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 781
Query: 688 ----SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRN 741
+ +G +PG PP P G E P RG + G++ N
Sbjct: 782 IGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE---------PGPRGLVGPPGSRGN 832
Query: 742 P-QMAQYGPQQ----TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGN 794
P + GP GP P PG + G Q +G+ GPQ GP G
Sbjct: 833 PGSRGENGPTGAVGFAGP-QGPDGQPGVKGEPGEPG--QKGDAGSPGPQGLAGSPGPHGP 889
Query: 795 YSRPPAYSG----VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
P G P + PG + GP+ P G G+ G++ P
Sbjct: 890 NGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEP--GKEGPPGLRGDP 947
Query: 851 -FPGNMSSMTPSSP--GMSQQGGPGM-------GPPMP 878
G + P+ P G +G PG GPP P
Sbjct: 948 GSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGP 985
Score = 81.6 bits (200), Expect = 8e-15
Identities = 165/671 (24%), Positives = 206/671 (30%), Gaps = 136/671 (20%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDED-DAPPKMGEPAGGR 141
G G PG E+ + G + G PPGPP KPGD+ P P G R
Sbjct: 651 GPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPR 710
Query: 142 YEH--------PGLGALGTQQPPVAV-----PGGGGGPAAVPEFNNYYG-SAAPASGGPG 187
E PG+ L ++ P G GP+ P G P G
Sbjct: 711 GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 770
Query: 188 GRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHYPGY 243
G GP D+ G + G + + A G PG + P +G P + G
Sbjct: 771 GTPGPKGDRGGIGEKGAEGT--AGNDGARGLPGPLGPPGPAGPTGEKGEPGPR-----GL 823
Query: 244 SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
P G G G G +G G G G G AG G G GS
Sbjct: 824 VGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGS 883
Query: 304 SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS-----GAT 358
+G P +GG GP G A GF AG+ P G
Sbjct: 884 PGPHGPNGVPGLKGGRGTQGPPG--------------ATGFPGSAGRVGPPGPAGAPGPA 929
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSS--PSAPPPPPS---------QPQSQAAAAGAAAG 407
L + P +R GS+ P+ PP P QP A
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT 989
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
GQ+ GM G + P PA +PG GPT P P+
Sbjct: 990 GQRGIVGMP-----GQRGERGMPGLPG------PAGTPGKVGPTGATGDKGPPGPV---- 1034
Query: 468 PQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQDSGDA 526
P G G PGP+ P G G TPG + + + D G A
Sbjct: 1035 ----------------GPPGSNGPVGEPGPEG-PAGNDG-TPGRDGAVGERGDRGDPGPA 1076
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDM 586
+P G G G G Q+ P P P ++ +R P
Sbjct: 1077 G-------LPGSQGAPGTPG--PVGAPGDAGQRGDPGSRGPIGP--PGRAGKRGLPGPQ- 1124
Query: 587 SQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG 646
G R K +H D Q+ L G LP G
Sbjct: 1125 -----GPRGD------KGDHGDRGDRGQKGHRGFTGLQG----LP-----------GPPG 1158
Query: 647 STSSQGDQSNPAQSPFSPHASPHL---SSIPGGPSP-SPVGSP-VGSNQSRSGPISPASI 701
QG P PF P P S G P P P+G P V + +GP P
Sbjct: 1159 PNGEQGSAGIPG--PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGE 1216
Query: 702 PGSQMPPQPPG 712
PG PP PPG
Sbjct: 1217 PGPPGPPGPPG 1227
Score = 79.7 bits (195), Expect = 3e-14
Identities = 200/846 (23%), Positives = 274/846 (32%), Gaps = 115/846 (13%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G+ G PGP G GQ PG P G + +A PK GEP +
Sbjct: 444 GSAGPPGSPGPQ------GSTGPQGIRGQPGDPGVP-----GFKGEAGPK-GEPGPHGIQ 491
Query: 144 HPGLGALGTQ-------QPPVAVPGGGGGPAAVPEFNNYYGS-------AAPASGGPGGR 189
P +G G + P P G G P + GS A GP G
Sbjct: 492 GP-IGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGS 550
Query: 190 AGPCFDQH--GGQQSPGMGMMH--SASAAAAGAPGSMDPL----QNSHEGYPNS-QCNHY 240
+GP Q G PG+ + + G G + PL ++ G P S
Sbjct: 551 SGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQ 610
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PG G G G G +G G G GA G + AG G G
Sbjct: 611 PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGP 670
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
G + G+ P G G PG G A G + G+ P G T
Sbjct: 671 PGPTGFQGLPGPPGPPGEGGK--PGDQGVPGDPGAVGPLGPRGERGNPGERGEP-GITG- 726
Query: 361 LNQLLTSPSPMMRSYGGSYPEYS-SPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM--GL 417
L M +G P+ S PS P P Q G G G+
Sbjct: 727 ----LPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGI 782
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
G + GA+ A + A+ P PG GPT +G P ++ P G NP
Sbjct: 783 G-EKGAEGTAGNDG---ARGLPGPLGPPGPAGPT--GEKGEPGPRGLVGPP---GSRGNP 833
Query: 478 HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPP 537
S+ + G GP GP P G++G PG P Q+ + + P
Sbjct: 834 GSRGENGPTGAVGFAGPQGPDGQP-GVKGE-PGE------PGQKGDAGSPGPQGLAGSPG 885
Query: 538 QYGQQGVSGYCQ-QGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQ 596
+G GV G +G Q P P+ + P + +EG
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEG------ 939
Query: 597 PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN 656
PP G P + P+ P G D + +G+T +G
Sbjct: 940 PPGLRGDPGSH--GRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGM 997
Query: 657 PAQSPFSPHASPHLSSIPG-GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQS 715
P Q + +PG +P VG P G+ + GP P PGS P PG +
Sbjct: 998 PGQ-----RGERGMPGLPGPAGTPGKVG-PTGATGDK-GPPGPVGPPGSNGPVGEPGPEG 1050
Query: 716 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP-SMSPHPSPGGQMHAG----- 769
+ + + ER G + +P A Q P + P +PG G
Sbjct: 1051 PAGNDGTPGRDGAVGER----GDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSR 1106
Query: 770 --ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG----PGPGMGISANNQ 823
I ++ G GPQ G +G++ ++G PGP
Sbjct: 1107 GPIGPPGRAGKRGLPGPQ-GPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGS 1165
Query: 824 MHGQGPSQPCGAVPLGRMPSAGMQNRPFP----------GNMSSMTPSSPGMSQQGGPG- 872
GP P G P G + +G + P P G++ P P G PG
Sbjct: 1166 AGIPGPFGPRG--PPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP----PGEPGP 1219
Query: 873 MGPPMP 878
GPP P
Sbjct: 1220 PGPPGP 1225
Score = 79.3 bits (194), Expect = 4e-14
Identities = 202/832 (24%), Positives = 263/832 (31%), Gaps = 155/832 (18%)
Query: 113 ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP-----GGGGGPA 167
ADP PP + P + GG + G G G + P VP G GPA
Sbjct: 83 ADPVTPP--------GECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPA 134
Query: 168 AVPEFNNYYGSAAP-ASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAA-----GAPGS 221
P GS P GP GR GP Q G PG+ A G G
Sbjct: 135 GPP------GSQGPRGERGPKGRPGPRGPQ-GIDGEPGVPGQPGAPGPPGHPSHPGPDGL 187
Query: 222 MDPLQNSHEGYPN-----SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
P G SQ PG P G G G GG+G G G G G
Sbjct: 188 SRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGP 247
Query: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
+ G G G G+ G SP +G PG G L
Sbjct: 248 MGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARG-----FPGAPGLPGLKGHR 302
Query: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396
G + G A PT PM P P P
Sbjct: 303 GHKGLEGPKGEVGAPGSKGEAGPT--------GPM------------GAMGPLGPRGMPG 342
Query: 397 SQAAAAGAAAGGQQAAAGM----GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
+ A GQ+ A GM G +G ++ P + + P + G GP
Sbjct: 343 ERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQG 402
Query: 453 GRSQGSPMDPMVMK-RPQLYGMGSNPHSQPQQSSP---YPGGSYGPPGPQRYPIGIQGRT 508
R + P P+ P G P ++ SP P GS GPPG G QG T
Sbjct: 403 QRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSP----GPQGST 458
Query: 509 -PGAMAGMQYPQQQDSGDATWKETFWLM--PPQYGQQGVSGYCQQGQQPYYSQQPQP--- 562
P + G Q D G +K P +G QG G G++ + P
Sbjct: 459 GPQGIRG----QPGDPGVPGFKGEAGPKGEPGPHGIQGPIG--PPGEEGKRGPRGDPGTV 512
Query: 563 -PHLP------------PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHE 607
P P P + LP + + S G++ P P PG P
Sbjct: 513 GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR 572
Query: 608 DL--NLIQQERPSSLPDLSGSIDDLPTGTEATLS-----SAVSASGSTSSQGDQSNPAQS 660
L N Q L L +D G ++ ++ G S GD P ++
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEA 632
Query: 661 PFSPHASPHLSSIPG-----GPSPSPVGSP-VGSNQSRSGPISPASIPGSQMPPQPPGSQ 714
P PG GPS PVG P + + GP P G PP PPG
Sbjct: 633 --GNAGVPGQRGAPGKDGEVGPS-GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGE- 688
Query: 715 SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP--SMSPHPSPGGQMHAGISS 772
G + Q P GP +PG + GI+
Sbjct: 689 ----------------------GGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITG 726
Query: 773 FQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
+ +G +GP GP+G+ P SG P +GP G+ + G GP
Sbjct: 727 LPGEKGMAGGHGPD----GPKGS----PGPSGTPGD--TGPPGLQGMPGERGIAGTPGPK 776
Query: 831 QPCGAV-PLGRMPSAGMQN-RPFPGNMSSMTPSSPGMSQQGGPG----MGPP 876
G + G +AG R PG + P+ P ++G PG +GPP
Sbjct: 777 GDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGP-TGEKGEPGPRGLVGPP 827
Score = 62.4 bits (150), Expect = 5e-09
Identities = 150/622 (24%), Positives = 192/622 (30%), Gaps = 96/622 (15%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G A GPD + G S G PPG L PG+ A G P G +
Sbjct: 727 LPGEKGMAGGHGPDGPK---GSPGPSGTPGDTGPPG--LQGMPGERGIA----GTP-GPK 776
Query: 142 YEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQH 197
+ G+G G + G G +P G A P GP G GP +
Sbjct: 777 GDRGGIGEKGAEGT-----AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRG 831
Query: 198 G----GQQSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAG 249
G+ P + + G PG +P Q G P Q G
Sbjct: 832 NPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ----------GLA 881
Query: 250 GGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G G G GG G G GA G A A A G G G G
Sbjct: 882 GSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPP 941
Query: 308 GVLSSPRQQGGGMMMGPGG--GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
G+ P G GP G GG G P G T Q
Sbjct: 942 GLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPG--------PDGPPGPAGTTGQRG 993
Query: 366 TSPSPMMRSYGGSYPEYSSPSAPPP--PPSQPQSQAAAAGAAAGGQQAAAGM-GLGKDMG 422
P G E P P P P + A G G G + G
Sbjct: 994 IVGMP------GQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPG 1047
Query: 423 AQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
+ A + G PGP + SQG+P P + P G +P S+
Sbjct: 1048 PEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRG 1107
Query: 482 QQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLM-----P 536
P G G PGPQ P G +G + + D G + L P
Sbjct: 1108 PIGPPGRAGKRGLPGPQG-PRGDKG---------DHGDRGDRGQKGHRGFTGLQGLPGPP 1157
Query: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQP-----QQDMSQEGY 591
G+QG +G P+ + P P P + P P + EG
Sbjct: 1158 GPNGEQGSAGI----PGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP 1213
Query: 592 GTRSQPPLAPGKPNH------EDLNLIQQERPSSLPDLS---GSIDD---LPTGTEATLS 639
PP PG P H + + + P LP+ + + DD G ATL
Sbjct: 1214 PGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLK 1273
Query: 640 SAVS-ASGSTSSQGDQSNPAQS 660
S S S G + +PA++
Sbjct: 1274 SLSSQIETMRSPDGSKKHPART 1295
Score = 57.8 bits (138), Expect = 1e-07
Identities = 107/440 (24%), Positives = 124/440 (28%), Gaps = 73/440 (16%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS--------------KP 124
N G G PQ GPD + G + G A PGP L+ K
Sbjct: 839 NGPTGAVGFAGPQ-GPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKG 897
Query: 125 GDEDDAPP-KMGEP-AGGRYEHPGLGALGTQQPPVAVPGGGGGPA--AVPEFNNYYGSAA 180
G PP G P + GR PG P+ PG G P P + G
Sbjct: 898 GRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRG 957
Query: 181 PAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN 238
PA GGPG + P D G P + G PG Q G
Sbjct: 958 PAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPG-----QRGERG------- 1005
Query: 239 HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
PG P G G G G G G G G+ G A G G
Sbjct: 1006 -MPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAV 1064
Query: 299 GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT 358
G G G P QG GP G A G AGQ P
Sbjct: 1065 GERGDRGDPGPAGLPGSQGAPGTPGPVG---------APGD--------AGQRGDPG--- 1104
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG-GQQAAAGM-G 416
S G P + P P P+ G GQ+ G G
Sbjct: 1105 ---------------SRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTG 1149
Query: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
L G A P PG GP+ P+ P + P + G
Sbjct: 1150 LQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGP--IGPPGVRGSVGE 1207
Query: 477 PHSQPQQSSPYPGGSYGPPG 496
+ P P G GPPG
Sbjct: 1208 AGPEGPPGEPGPPGPPGPPG 1227
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 93.2 bits (230), Expect = 3e-18
Identities = 130/486 (26%), Positives = 165/486 (33%), Gaps = 84/486 (17%)
Query: 40 HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
H H +LQQQ Q QQQQQQQQQQQQQQQQQQ N +L
Sbjct: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573
Query: 83 ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
GG GG QP + E GG+ + G + P L +
Sbjct: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629
Query: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
P G+ R GL A G P P PGG G GP P
Sbjct: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
G PA PG + G G QSPG G + SAA+ P D ++ G P
Sbjct: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747
Query: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
S P +G G GGGGGS GGGGGGGA +A+ A
Sbjct: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
Query: 295 GGGGGYGGSSAGYG----------------VLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
G +G L +P P G G
Sbjct: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867
Query: 339 SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
+A G G + P G P +P P S G+ S S PP PP+Q
Sbjct: 868 AAVAG---NPGSDYFPGGTAP------GAPGPGGPS--GTSSSGSKASGPPNPPAQGDGT 916
Query: 399 AAA------AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
+ + + + G+ + G G G+ + + + S S G PG +
Sbjct: 917 SLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSP 976
Query: 453 GRSQGS 458
G+ Q S
Sbjct: 977 GQQQAS 982
Score = 81.6 bits (200), Expect = 8e-15
Identities = 230/994 (23%), Positives = 308/994 (30%), Gaps = 251/994 (25%)
Query: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
PPGP P +S G+ PP +G EP G H L A G Q PV
Sbjct: 44 PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88
Query: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
+ ++G P G PG + P F + G PG +H AAG G
Sbjct: 89 ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144
Query: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
S P +E SQ G RPG G +
Sbjct: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204
Query: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
G + G+ + ++ A G + +G+ + SP RQ
Sbjct: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264
Query: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
GG G P G LSK A F+RF+G + P
Sbjct: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
Query: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
G P++ L+ P P + P P PP PP+ P+ Q
Sbjct: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384
Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
AG +GG Q M + +Y + S P S P P +Q
Sbjct: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444
Query: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
+P V KRP+ GS + H P S YPG G + PP
Sbjct: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501
Query: 496 GPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPY 555
P +P G + P P Q QQ QQ
Sbjct: 502 VPDSFPSGPPLQHPA-------PDHQS-------------------------LQQQQQQQ 529
Query: 556 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL---NLI 612
QQ Q Q QQ+ Q QQ Q+ + + L NL
Sbjct: 530 QQQQQQ-------------QQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLA 576
Query: 613 QQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 672
Q P + G + P G A + GST + + Q+P S S
Sbjct: 577 QLGHPGDVGQ-GGLVHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS- 633
Query: 673 IPGGPSPSPVGSPVGSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQE 731
GP P P G + SG P S PP PPG L + P+ QE
Sbjct: 634 ---GPHPPP-GDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QE 682
Query: 732 RGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGP 791
M G P + PSPG Q + G
Sbjct: 683 PMRMPGEGHVPAL---------------PSPGLQFGGSL-------------------GG 708
Query: 792 QGNYSRPPAYSGVPSASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
G P A G+PSA+ P P SA + GQ P P GA AG Q+
Sbjct: 709 LGQLQSPGAGVGLPSAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQST 756
Query: 850 PFPGNMSSMTPSSPGMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
P G + PS+ G G G G PP P + +Q +A+ + A + + ++ S
Sbjct: 757 PHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSS 815
Query: 906 FPGMNQSGLMASSSPYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMM 959
+ +A+ S Q M N + N + PP N + G A
Sbjct: 816 KDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAG 872
Query: 960 SPGESKLPLPLKADGKEEGTPQPESKSKKSSSST 993
+PG P G G P P S SSS +
Sbjct: 873 NPGSDYFP-----GGTAPGAPGPGGPSGTSSSGS 901
Score = 66.6 bits (161), Expect = 3e-10
Identities = 119/475 (25%), Positives = 168/475 (35%), Gaps = 65/475 (13%)
Query: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
GG+ GG Q ++ P G SAA + PP S G + P A GR
Sbjct: 703 GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754
Query: 143 EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
P G G PP A GGGGG A P ++ S ++ G + F++
Sbjct: 755 STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
Query: 198 GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
+ + G + + S A + GAP G QN +G N
Sbjct: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
Query: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
+++PG + PGA G GG G GS G G G + + + +
Sbjct: 874 PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933
Query: 291 AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
GGGG G G G +S P P GGA +S + A+G+A GG
Sbjct: 934 PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990
Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
AG+ + GA + LTSPS G P +S +++
Sbjct: 991 AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
+ +D + + A A + SP P +G + P P
Sbjct: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099
Query: 468 PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
P G+G SN S P Y GG G PG P Q RTP + +G P +
Sbjct: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDE 1149
Score = 56.2 bits (134), Expect = 3e-07
Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)
Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1180
Q P + GS Q G N PG AS HG GG + +
Sbjct: 95 QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147
Query: 1181 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1226
PF++ +++S P+ S P P + G S +P + PN+ F G
Sbjct: 148 PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205
Query: 1227 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1280
+ GS + ++ N D YN ++PSG + Q P+ A+
Sbjct: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261
Query: 1281 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1339
G+Q PG P + P GL K H PP ++ + Q
Sbjct: 262 ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303
Query: 1340 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1399
QQQ+ + + +SG + P+ G P SR + P Q PP P Q
Sbjct: 304 QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359
Query: 1400 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1451
+ P R + +P P Q G P G Q P P + + P R+ +
Sbjct: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417
Query: 1452 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1500
S P + P + + +Q PP +P + P S + + +
Sbjct: 418 SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477
Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
+L+N +SPS P LP + P VP S +GPP Q P
Sbjct: 478 HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515
Score = 52.8 bits (125), Expect = 4e-06
Identities = 207/923 (22%), Positives = 264/923 (28%), Gaps = 200/923 (21%)
Query: 46 HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
H L Q Q QQQ QQ QQQ P + NS G GG
Sbjct: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394
Query: 91 QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
GP E P H S PP ++ DAPP M
Sbjct: 395 DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454
Query: 138 AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
R++ PG GAL P A PG G P + + S P
Sbjct: 455 KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512
Query: 183 SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
P ++ Q QQ L N Q
Sbjct: 513 QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
P ++ G G G GG GG GG GG GAG G A A +A
Sbjct: 573 PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630
Query: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
+ G G L R G G+ P G S A G F G Q
Sbjct: 631 -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
P P + PSP ++ +GGS G Q A
Sbjct: 683 PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717
Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
G+GL AA+++R P P +G G P G
Sbjct: 718 GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753
Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
S PHS P +SP G G G + G G YP Q D
Sbjct: 754 QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPD----------- 790
Query: 534 LMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGY 591
P Q G G +++ +L Q+ L + Q +
Sbjct: 791 FQPSQRTSASKLGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVT 847
Query: 592 GTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
+ PP K L Q E + + D P GT SG++SS
Sbjct: 848 FNKKNPPEGKRK-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900
Query: 652 GDQSNPAQSP-------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP----- 698
S P P SP+ + S G P G G + SG +SP
Sbjct: 901 SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD 960
Query: 699 ---ASIPGSQMPPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGP 749
A+ P PG Q S SS +P P E+ + + G
Sbjct: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
Query: 750 QQT------GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSR 797
Q G + S SP + F S +Y + S PQ SR
Sbjct: 1021 QPDLIGSLDGGAKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASR 1074
Query: 798 PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
P +G P G G G GP P A+ LG M ++ + G
Sbjct: 1075 SPLVTGSPKLPPRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGP 1124
Query: 858 MTPSSPGMSQQGGP--GMGPPMP 878
P +PG+ Q P G P P
Sbjct: 1125 GHPGTPGLEQVRTPTSSSGAPPP 1147
Score = 45.1 bits (105), Expect = 8e-04
Identities = 165/788 (20%), Positives = 257/788 (32%), Gaps = 201/788 (25%)
Query: 592 GTRSQPPLAPGKPNHEDLNLIQQ---ERPSSLPDLSGS-------------IDDLPTGTE 635
G SQPP A G + + + +RP +LPD S +D P
Sbjct: 142 GLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA- 200
Query: 636 ATLSSAVSASGSTS---------SQG-----DQSNPAQSP------FSPHAS----PHLS 671
A+ S+SGS S +QG + + P ++P FSP S PH +
Sbjct: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYA 260
Query: 672 S---IPGGPSPSPVGSP-----VGSNQSRSGPISPASIPGSQMPPQPPGSQ--------S 715
+ +PGG P P VG ++ + P P P Q PQ Q S
Sbjct: 261 AGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP--PQQQPQQQQQPQQQQQQHGVFFERFS 318
Query: 716 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
+ P + + M Q+ P Q P Q P P P P G+ Q
Sbjct: 319 GARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPP------GLLVRQN 372
Query: 776 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 835
S PQ + +G PS GP + PSQ
Sbjct: 373 SCPPALPRPQQGE-------------AGTPSGGLQDGGPML------------PSQHAQF 407
Query: 836 VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 895
P ++NR SM P S + P PP N++ Q A
Sbjct: 408 ----EYPIHRLENR-------SMHPYSEPVFSMQHP---PPQQAPNQRLQHFDAPPYM-- 451
Query: 896 ANSAQSRQGSFPGMNQSGLMAS--SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASV 953
N A+ + FPG AS S ++ ++N S P P + +S +
Sbjct: 452 -NVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGP 510
Query: 954 GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
L +P L + +++ Q + + ++ + ++ + +++
Sbjct: 511 PLQHP-APDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQR 569
Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
L + G VG+ L V +GGLAQ N ++ +
Sbjct: 570 LRQPNLAQLGHPGD-------VGQGGL------VHGGPVGGLAQPNFEREGGSTGAG-RL 615
Query: 1074 GTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQG 1133
GT A L ++ + G PPP G
Sbjct: 616 GTFEQQAPHLAQESAWF---------SGPHPPP--------------------------G 640
Query: 1134 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1193
P+ G + + P D P P+ P P GG
Sbjct: 641 DLLPRRMGGSGL---PADCGPHDPSLAP----PPPPGG---------------------- 671
Query: 1194 NSMTPNAPYQQGMSMPDVMGRMPYEPNKD-PFGGMRKVPGSSEPFMTQGQMPNSSMQDMY 1252
+ + P Q+ M MP G +P P+ FGG G + +P+++ +
Sbjct: 672 SGVLFRGPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE--- 727
Query: 1253 NQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPG-QGPPS----GQPPYGGHQPGL 1307
+ P + +G + FP+GA+ R+ P+ PG PPS G GG G
Sbjct: 728 RRPPPPDFATSALGGQPGFPFGAA-GRQSTPHSG--PGVNSPPSAGGGGGSSGGGGGGGA 784
Query: 1308 YPQQPNYK 1315
YP QP+++
Sbjct: 785 YPPQPDFQ 792
Score = 41.6 bits (96), Expect = 0.009
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 58 QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
QQQ QQQQQ QQQQQQH + G G P P + P +
Sbjct: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
Query: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Q PP PP LL + ++ PP + P G P G
Sbjct: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392
Score = 33.1 bits (74), Expect = 3.1
Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)
Query: 1259 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1311
AMS LG +G + PYG + H Q P G GQ P+ GH +P Q
Sbjct: 51 AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109
Query: 1312 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1360
+ H G +G P + H G + YGG+ G +P
Sbjct: 110 --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154
Query: 1361 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1407
+ Q P + +R PG + +H +P + P +++S G +
Sbjct: 155 HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211
Query: 1408 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1462
+ + + QG + YPG + DM P + E Q P + + RQ
Sbjct: 212 SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267
Query: 1463 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1508
M +A M QP + PQ Q H S R +
Sbjct: 268 GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326
Query: 1509 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1553
+ PS P M+ + P P Q PP QPPP PPG
Sbjct: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 91.7 bits (226), Expect = 7e-18
Identities = 211/866 (24%), Positives = 276/866 (31%), Gaps = 145/866 (16%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
L G G PGP H D + PPGPP PGD+ D
Sbjct: 424 LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
+G G PGL L + PG G GP +P G A
Sbjct: 480 TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
P G G G G + G S A G PG P Q+ G P +
Sbjct: 538 PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 240 ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
+ G P G G G G G G G G G VA G
Sbjct: 594 GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653
Query: 296 GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
G G G G+ P G + G PG G + G
Sbjct: 654 DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713
Query: 343 --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
GF G P GA T ++ P + G P ++ P PP PP P +
Sbjct: 714 PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
A G G G+ G + P PG PG + G
Sbjct: 769 GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
P P + +P L+G+ ++ P P G GPPG + P GI G PG +
Sbjct: 827 PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878
Query: 517 YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPS 574
P A+ P G+ G+ G P P +P ++ L
Sbjct: 879 SPGLPGKAGASG------FPGTKGEMGMMGP---------PGPPGPLGIPGRSGVPGLKG 923
Query: 575 QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
+ QP G++ +P L PG P D NL+ + P L G
Sbjct: 924 DDGLQGQPGLPGPTGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG--------- 973
Query: 635 EATLSSAVSASGSTSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVG 687
+ G GD P S P P +P L PG P + +G
Sbjct: 974 ---IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030
Query: 688 SN-----QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
Q GP P+ +PG P PG + + P +S +P + G + P
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEP 1085
Query: 743 QMAQYGPQQTG-------PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGN 794
+ Y P G P + P +PG + G+ F GT GP GP+G
Sbjct: 1086 GLPGY-PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG- 1134
Query: 795 YSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-P 852
S PP G+P PGP G Q GP G +P AG + P P
Sbjct: 1135 ISGPPGNPGLPGE----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187
Query: 853 GNMSSMTPSSPGMSQQGGPGMGPPMP 878
G + P PG+S Q G G P +P
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIP 1213
Score = 91.3 bits (225), Expect = 1e-17
Identities = 197/793 (24%), Positives = 241/793 (30%), Gaps = 166/793 (20%)
Query: 92 PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
PGP G G PPGPP L PG + D P G+P G PGL
Sbjct: 759 PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815
Query: 148 GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
+G Q PP P G GP P + G G PG G + SPG+
Sbjct: 816 PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
GAPG + P P S PG PG G G G G G G
Sbjct: 868 --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904
Query: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
G G G G G G G GS G+ P ++ G
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
G L S G+Q G P P L L P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024
Query: 371 MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
+ + G +P PP P P QP S G + +GL G +
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084
Query: 427 AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
P + PG PG +GS DP L G+ P ++ Q P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121
Query: 487 YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQ 542
G+ GPPGP+ P G G PG + G +P Q K P Q G
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK------PGQDGIP 1175
Query: 543 GVSGYCQQGQQPYYSQQPQPPHLP--------------PQAQYLPSQSQQRYQPQQDMSQ 588
G +G + QP + P PP LP P LP P+ +
Sbjct: 1176 GPAGQKGEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPG-------PKGEPGF 1227
Query: 589 EGYGTRSQPPLAPGKPNHE---------------DLNLIQQERPSSLPDLSGSIDDLPTG 633
G+ PP PG P L E P LP G +
Sbjct: 1228 HGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNP 1287
Query: 634 TEATLSSAVSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQS 691
+ L G G Q NP + + P L +PG P P G P
Sbjct: 1288 GQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP------ 1341
Query: 692 RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
G P PG PP PPG S + P G + P GPQ
Sbjct: 1342 --GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ- 1393
Query: 752 TGPSMSPHPS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYS 796
GP P P+ PG G+ F Q + G GP GP G
Sbjct: 1394 -GPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQ 1447
Query: 797 RPPAYSGVPSASY 809
PP G S ++
Sbjct: 1448 GPPGPPGTSSVAH 1460
Score = 73.2 bits (178), Expect = 3e-12
Identities = 212/887 (23%), Positives = 263/887 (29%), Gaps = 186/887 (20%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
GA G PG + + + G G PPGPP + +PG P G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173
Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
+PG + P +PG G P G P GP G GP +
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219
Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
Q P G PG + Q +G P + P PG
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G GG G G G G G G G G G G G
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335
Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
P G +++ G G K G G G+ P P
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382
Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
G P ++ PP PP P + G GL GA
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436
Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG---------MGSNPHS 479
P A S PG PGP GSP D + + G +G+
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491
Query: 480 QPQQSS----PYPGGSYGPPGPQRY--------PIGIQGRTPGAMAGMQYPQQQ-DSGDA 526
P Q P P GS G PG + P G+ G PGA +P + + GD
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDI 550
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
TF M G+ G G P P LP P LP + +P
Sbjct: 551 L---TFPGMKGDKGELGSPG------------APGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL---------PTGTE 635
+ G PP PG LP L G+I + P G E
Sbjct: 596 ITFKGERG----PPGNPG-----------------LPGLPGNIGPMGPPGFGPPGPVG-E 633
Query: 636 ATLSSAVSASGSTSSQGDQSNPAQSPFSPH-----------------ASPHLSSIPGGPS 678
+ G G + +P Q+ P P L PG P
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPG 693
Query: 679 -PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF 734
P G P GP P PG PP PG+ P P P+ E GF
Sbjct: 694 IPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGF 753
Query: 735 -MAGTQRNPQMAQY----GPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
+ G P + + GP+ G P P PG G+ G GP Q
Sbjct: 754 ALPGPPGPPGLPGFKGALGPK--GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQP 807
Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMP 842
GP G PP G+ GP G +HG +G P G P G
Sbjct: 808 GPMG----PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 843 SAGMQNRPFPGNMSSMTPSSPGMSQQGG----PG-------MGPPMP 878
S G+ P P P SPG+ + G PG MGPP P
Sbjct: 864 SPGIPGAPGPIG----PPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906
Score = 63.2 bits (152), Expect = 3e-09
Identities = 106/421 (25%), Positives = 121/421 (28%), Gaps = 127/421 (30%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG QPGP E+ + G GQ PG P PG
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194
Query: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
PGL L Q+ +PG G P G PG + P F G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236
Query: 204 GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGG 261
G PGS P +G P Q PG RPG G G G G GG
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGLPGPEGPPGLPGNGGI 1280
Query: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGM 320
G G G G G G G G+ +P + G GM
Sbjct: 1281 KGEKGNPGQPGLPGL---------------------PGLKGDQGPPGLQGNPGRPGLNGM 1319
Query: 321 MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYP 380
PG G GF G + P A P P
Sbjct: 1320 KGDPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEP 1350
Query: 381 EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSH 440
P PP P P Q+ AG GL G Q P
Sbjct: 1351 GLIGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG--------- 1400
Query: 441 PAMSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPG 496
P PG PG P + G DP G+ P ++ P P G GPPG
Sbjct: 1401 PTGPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPG 1451
Query: 497 P 497
P
Sbjct: 1452 P 1452
Score = 54.3 bits (129), Expect = 1e-06
Identities = 165/699 (23%), Positives = 217/699 (31%), Gaps = 154/699 (22%)
Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
EG+P PG+ P G G G G G G G G G
Sbjct: 56 EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
G G G G + G P G + GP G K GS G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168
Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
+P P Q L P+ + G P PP PP P G
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214
Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
+ G+ G + Q P PG PG Q P+D K Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260
Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWK 529
G+ + + P P G GPPGP PG G + Q +
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKGEKGEQGE-------- 293
Query: 530 ETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
P + G+ G G + QP P LP Y P + P +D ++
Sbjct: 294 ------PGKRGKPGKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEK 330
Query: 590 GYGTRSQPPLAPGK--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSS 640
G + PP PG P I ++ LP L G + P G +
Sbjct: 331 GQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGA 390
Query: 641 AVSAS-------GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR 692
AV G +GD+ P S P P L PG P P P G P G +
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPP 446
Query: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
S I PG PP PPGS + + E+G + G + + G +
Sbjct: 447 SDEICE---PG---PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGIS 490
Query: 753 GPSMSPH----PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSAS 808
GP P P P G + ++ + T GP+G P A G P
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFP 541
Query: 809 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT---- 859
S PG ++ +G GA L +P G+ P P G +T
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGE 601
Query: 860 ---PSSPGM-------SQQGGPGMGPPMPTVNRKAQEAA 888
P +PG+ G PG GPP P + Q A
Sbjct: 602 RGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVA 640
Score = 46.2 bits (108), Expect = 4e-04
Identities = 63/230 (27%), Positives = 70/230 (30%), Gaps = 38/230 (16%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE----------- 127
+ L G G PGP E HG G PGP L G+
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGL 1265
Query: 128 --DDAPPKMGEPAG--------GRYEHPGLGALGTQQPPVAVPGGGGGPA---------- 167
+ PP + G G+ PGL L Q P + G G P
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL 1325
Query: 168 -AVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL 225
VP F G S P S GP G G G PG AG PG P
Sbjct: 1326 PGVPGFPGMKGPSGVPGSAGPEGEPG-LIGPPGPPGLPGPSGQSIIIKGDAGPPGI--PG 1382
Query: 226 QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Q +G P Q G P G G G G G GG G G G
Sbjct: 1383 QPGLKGLPGPQGPQ--GLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG 1430
Score = 40.4 bits (93), Expect = 0.019
Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)
Query: 633 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 685
G++ S G G + +P + P P IPG P P + P
Sbjct: 35 GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94
Query: 686 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 743
G P +PG PG Q + + P GF + G P
Sbjct: 95 PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150
Query: 744 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 801
+ + MS P P G + G Q +G GP GP G PP
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202
Query: 802 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 856
G P GP PG+ G N ++ QGP G P G Q RP
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256
Query: 857 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
PG G PG+ GPP P K ++ + + PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 91.7 bits (226), Expect = 7e-18
Identities = 211/866 (24%), Positives = 276/866 (31%), Gaps = 145/866 (16%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
L G G PGP H D + PPGPP PGD+ D
Sbjct: 424 LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
+G G PGL L + PG G GP +P G A
Sbjct: 480 TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
P G G G G + G S A G PG P Q+ G P +
Sbjct: 538 PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 240 ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
+ G P G G G G G G G G G VA G
Sbjct: 594 GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653
Query: 296 GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
G G G G+ P G + G PG G + G
Sbjct: 654 DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713
Query: 343 --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
GF G P GA T ++ P + G P ++ P PP PP P +
Sbjct: 714 PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
A G G G+ G + P PG PG + G
Sbjct: 769 GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
P P + +P L+G+ ++ P P G GPPG + P GI G PG +
Sbjct: 827 PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878
Query: 517 YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPS 574
P A+ P G+ G+ G P P +P ++ L
Sbjct: 879 SPGLPGKAGASG------FPGTKGEMGMMGP---------PGPPGPLGIPGRSGVPGLKG 923
Query: 575 QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
+ QP G++ +P L PG P D NL+ + P L G
Sbjct: 924 DDGLQGQPGLPGPTGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG--------- 973
Query: 635 EATLSSAVSASGSTSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVG 687
+ G GD P S P P +P L PG P + +G
Sbjct: 974 ---IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030
Query: 688 SN-----QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
Q GP P+ +PG P PG + + P +S +P + G + P
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEP 1085
Query: 743 QMAQYGPQQTG-------PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGN 794
+ Y P G P + P +PG + G+ F GT GP GP+G
Sbjct: 1086 GLPGY-PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG- 1134
Query: 795 YSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-P 852
S PP G+P PGP G Q GP G +P AG + P P
Sbjct: 1135 ISGPPGNPGLPGE----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187
Query: 853 GNMSSMTPSSPGMSQQGGPGMGPPMP 878
G + P PG+S Q G G P +P
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIP 1213
Score = 90.9 bits (224), Expect = 1e-17
Identities = 196/791 (24%), Positives = 242/791 (30%), Gaps = 159/791 (20%)
Query: 92 PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
PGP G G PPGPP L PG + D P G+P G PGL
Sbjct: 759 PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815
Query: 148 GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
+G Q PP P G GP P + G G PG G + SPG+
Sbjct: 816 PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
GAPG + P P S PG PG G G G G G G
Sbjct: 868 --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904
Query: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
G G G G G G G GS G+ P ++ G
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
G L S G+Q G P P L L P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024
Query: 371 MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
+ + G +P PP P P QP S G + +GL G +
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084
Query: 427 AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
P + PG PG +GS DP L G+ P ++ Q P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121
Query: 487 YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQ 542
G+ GPPGP+ P G G PG + G +P Q K P Q G
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK------PGQDGIP 1175
Query: 543 GVSGYCQQGQQPYYSQQPQPPHLP-----------PQAQYLPSQSQQRYQP--------- 582
G +G + QP + P PP LP P P + +P
Sbjct: 1176 GPAGQKGEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQ 1234
Query: 583 -------QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTE 635
+ EG P PG+P + L E P LP G + +
Sbjct: 1235 GPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQ--GLPGPEGPPGLPGNGGIKGEKGNPGQ 1292
Query: 636 ATLSSAVSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQSRS 693
L G G Q NP + + P L +PG P P G P
Sbjct: 1293 PGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP-------- 1344
Query: 694 GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTG 753
G P PG PP PPG S + P G + P GPQ G
Sbjct: 1345 GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ--G 1397
Query: 754 PSMSPHPS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYSRP 798
P P P+ PG G+ F Q + G GP GP G P
Sbjct: 1398 PQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQGP 1452
Query: 799 PAYSGVPSASY 809
P G S ++
Sbjct: 1453 PGPPGTSSVAH 1463
Score = 73.2 bits (178), Expect = 3e-12
Identities = 212/887 (23%), Positives = 263/887 (29%), Gaps = 186/887 (20%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
GA G PG + + + G G PPGPP + +PG P G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173
Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
+PG + P +PG G P G P GP G GP +
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219
Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
Q P G PG + Q +G P + P PG
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G GG G G G G G G G G G G G
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335
Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
P G +++ G G K G G G+ P P
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382
Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
G P ++ PP PP P + G GL GA
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436
Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG---------MGSNPHS 479
P A S PG PGP GSP D + + G +G+
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491
Query: 480 QPQQSS----PYPGGSYGPPGPQRY--------PIGIQGRTPGAMAGMQYPQQQ-DSGDA 526
P Q P P GS G PG + P G+ G PGA +P + + GD
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDI 550
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
TF M G+ G G P P LP P LP + +P
Sbjct: 551 L---TFPGMKGDKGELGSPG------------APGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL---------PTGTE 635
+ G PP PG LP L G+I + P G E
Sbjct: 596 ITFKGERG----PPGNPG-----------------LPGLPGNIGPMGPPGFGPPGPVG-E 633
Query: 636 ATLSSAVSASGSTSSQGDQSNPAQSPFSPH-----------------ASPHLSSIPGGPS 678
+ G G + +P Q+ P P L PG P
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPG 693
Query: 679 -PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF 734
P G P GP P PG PP PG+ P P P+ E GF
Sbjct: 694 IPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGF 753
Query: 735 -MAGTQRNPQMAQY----GPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
+ G P + + GP+ G P P PG G+ G GP Q
Sbjct: 754 ALPGPPGPPGLPGFKGALGPK--GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQP 807
Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMP 842
GP G PP G+ GP G +HG +G P G P G
Sbjct: 808 GPMG----PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 843 SAGMQNRPFPGNMSSMTPSSPGMSQQGG----PG-------MGPPMP 878
S G+ P P P SPG+ + G PG MGPP P
Sbjct: 864 SPGIPGAPGPIG----PPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906
Score = 61.2 bits (147), Expect = 1e-08
Identities = 105/419 (25%), Positives = 120/419 (28%), Gaps = 120/419 (28%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG QPGP E+ + G GQ PG P PG
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194
Query: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
PGL L Q+ +PG G P G PG + P F G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236
Query: 204 GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
G PGS P +G P Q PG RPG G G G G
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGFQGLPGPEGPPGLPGN 1280
Query: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGMMM 322
GG G G G G G G G+ +P + G GM
Sbjct: 1281 GGIKGEKGNPGQPGL----------------PGLPGLKGDQGPPGLQGNPGRPGLNGMKG 1324
Query: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
PG G GF G + P A P P
Sbjct: 1325 DPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEPGL 1355
Query: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
P PP P P Q+ AG GL G Q P P
Sbjct: 1356 IGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG---------PT 1405
Query: 443 MSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
PG PG P + G DP G+ P ++ P P G GPPGP
Sbjct: 1406 GPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPGP 1455
Score = 54.3 bits (129), Expect = 1e-06
Identities = 165/699 (23%), Positives = 217/699 (31%), Gaps = 154/699 (22%)
Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
EG+P PG+ P G G G G G G G G G
Sbjct: 56 EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
G G G G + G P G + GP G K GS G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168
Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
+P P Q L P+ + G P PP PP P G
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214
Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
+ G+ G + Q P PG PG Q P+D K Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260
Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWK 529
G+ + + P P G GPPGP PG G + Q +
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKGEKGEQGE-------- 293
Query: 530 ETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
P + G+ G G + QP P LP Y P + P +D ++
Sbjct: 294 ------PGKRGKPGKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEK 330
Query: 590 GYGTRSQPPLAPGK--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSS 640
G + PP PG P I ++ LP L G + P G +
Sbjct: 331 GQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGA 390
Query: 641 AVSAS-------GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR 692
AV G +GD+ P S P P L PG P P P G P G +
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPP 446
Query: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
S I PG PP PPGS + + E+G + G + + G +
Sbjct: 447 SDEICE---PG---PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGIS 490
Query: 753 GPSMSPH----PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSAS 808
GP P P P G + ++ + T GP+G P A G P
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFP 541
Query: 809 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT---- 859
S PG ++ +G GA L +P G+ P P G +T
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGE 601
Query: 860 ---PSSPGM-------SQQGGPGMGPPMPTVNRKAQEAA 888
P +PG+ G PG GPP P + Q A
Sbjct: 602 RGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVA 640
Score = 47.4 bits (111), Expect = 2e-04
Identities = 72/267 (26%), Positives = 85/267 (31%), Gaps = 46/267 (17%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA 138
+ L G G PGP E HG G PPGPP PG + P P
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHG------FPGVQGPPGPP--GSPGPALEGPKGNPGPQ 1257
Query: 139 G--GRYEHPGLGALGTQQPPVAVPGGGG--------GPAAVPEFNNYYGSAAPAS-GGPG 187
G GR PG L + P +PG GG G +P G P G
Sbjct: 1258 GPPGR---PGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNP 1314
Query: 188 GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
GR G +G + PG+ + +G PGS P EG P
Sbjct: 1315 GRPG----LNGMKGDPGLPGVPGFPGMKGPSGVPGSAGP-----EGEPGL-------IGP 1358
Query: 246 PGAGGGGGGGG------GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
PG G G G G G G G G G G G G G
Sbjct: 1359 PGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPG 1418
Query: 300 YGGSSAGYGVLSSPRQQGGGMMMGPGG 326
+ G+ G P Q G + GP G
Sbjct: 1419 FDGAGGRKGDPGLPGQPGTRGLDGPPG 1445
Score = 40.4 bits (93), Expect = 0.019
Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)
Query: 633 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 685
G++ S G G + +P + P P IPG P P + P
Sbjct: 35 GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94
Query: 686 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 743
G P +PG PG Q + + P GF + G P
Sbjct: 95 PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150
Query: 744 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 801
+ + MS P P G + G Q +G GP GP G PP
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202
Query: 802 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 856
G P GP PG+ G N ++ QGP G P G Q RP
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256
Query: 857 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
PG G PG+ GPP P K ++ + + PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311
Score = 33.5 bits (75), Expect = 2.4
Identities = 87/354 (24%), Positives = 111/354 (31%), Gaps = 58/354 (16%)
Query: 1101 GEEPPPEVFSTGDTKKQPKLQ----PPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1156
G+ P + T K QP L P P + GP P + G +PG+ P
Sbjct: 1101 GDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP--PGNPG------LPGEPGPVG 1152
Query: 1157 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1216
P P + G+ + P + P + P P G+S G +P
Sbjct: 1153 GGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGN--PGPPGLPGLSGQKGDGGLP 1210
Query: 1217 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1276
P G + PG QG + P G G R F
Sbjct: 1211 GIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGF----- 1265
Query: 1277 YDRRHEPYGQQYPGQGPPSGQPPYGG--------HQPGLYPQQPNYKRHMDGMYGPPAKR 1328
Q PG P G P GG QPGL P P K G GPP
Sbjct: 1266 ---------QGLPGPEGPPGLPGNGGIKGEKGNPGQPGL-PGLPGLK----GDQGPPG-- 1309
Query: 1329 HEGDMYNMQYSSQQQEMYNQYG--GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIP 1386
+Q + + + G G P ++G P S PG I G P
Sbjct: 1310 -------LQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPG-P 1361
Query: 1387 PQMMGGPLQSSSSEG----PQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMN 1436
P + G QS +G P +P P Q QG GPT P PG N
Sbjct: 1362 PGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGP-QGPQGLPGPTGPPGDPGRN 1414
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 91.7 bits (226), Expect = 7e-18
Identities = 202/933 (21%), Positives = 300/933 (32%), Gaps = 139/933 (14%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQADP-----PGPPLLSKPGDEDDAPPKMGEPAGGR 141
GG P P S GG A P P PP ++ P PK G PA
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS------PK-GSPAATP 1027
Query: 142 YEHPGLGALGTQQPPVAVPGGG-GGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
+ G PP A P G PAA P PA+ P + GP G
Sbjct: 1028 FPK------GASTPPAATPPSPKGSPAATPLPKG--APTTPAATLPSPKGGPATPSLKGA 1079
Query: 201 QSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG 260
+P P + P P+ + P + P + GG G
Sbjct: 1080 PTP---------------PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL--SSPRQQGG 318
+ GG A AA GG G ++P G
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 319 GMMMGPGGGGAASLSKAAAGSAAGGFQRFA--GQNQHPSGATPTLNQLLTSPSPMMRSYG 376
G+ P GA + A S GG + G P+ P+ L +PSP G
Sbjct: 1185 GLAT-PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK----G 1239
Query: 377 GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA--SPAWAA 434
++P +P P+ P + A AA G+ GA A P+
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG 1299
Query: 435 AQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP 494
S P +P P T +GSP P P + +P P + P
Sbjct: 1300 GPATSPPKGAPTPPAATPPSPKGSPGTP------------------PPKGAPTPP-AVTP 1340
Query: 495 PGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQP 554
P P+ P + TP + G P ++ PP G P
Sbjct: 1341 PSPKGTPT-LPATTPSSKGGPTTPSSKEGPT----------PPAATPSHKGGPAMTPPSP 1389
Query: 555 YYSQQ-PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 613
P P P +P ++ P +++EG T S+ L P P ++L +
Sbjct: 1390 KRGPAIPSPKGDPTSPAVIPLSPKKA--PATPVTREGAATPSKGDLTP--PAVTPVSLKK 1445
Query: 614 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 673
S+ P G AT SS+GD + PA +P SP P +
Sbjct: 1446 APATSA-----------PKGGPAT----------PSSKGDPTLPAVTPPSPKEPPAPKQV 1484
Query: 674 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
SP + P +PA + +P P S E + P+ + P+
Sbjct: 1485 ATSSSP------------KKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTAT 1532
Query: 734 FMAG---TQRNPQMAQYGPQQTGPSMSPHPS-PGGQMHAGISSFQQSNSSGTYGPQMSQY 789
++ P+ A P T PS P+ P + S ++++S P +
Sbjct: 1533 LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG 1592
Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
P P PS + P + + + GP+ P P +
Sbjct: 1593 APSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK----GPATPAPKGTPTSPPVTPSSLK 1648
Query: 850 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
P + +S+T Q G+ K A A +A +R+G
Sbjct: 1649 DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGP---- 1704
Query: 910 NQSGLMASSSPYSQP----MNNSSSLMNTQAPPYSMAPAMVNSSAASVGL------ADMM 959
Q+ +++SP P N S ++T AP + P +SS + G +
Sbjct: 1705 -QTKKSSATSPPICPDPSAKNGSKGPLSTVAPA-PLLPVQKDSSKTAKGKDASHSPKGPL 1762
Query: 960 SPGESKLPLPLKADGKEEGTPQPESKSKKSSSS 992
+P ESK PL A E+ P+PES S ++ S
Sbjct: 1763 APPESKASTPLTAAAFEKVLPKPESASVSAAPS 1795
Score = 75.1 bits (183), Expect = 7e-13
Identities = 209/971 (21%), Positives = 315/971 (32%), Gaps = 204/971 (21%)
Query: 621 PDLSGSIDDLPT------GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP 674
P L G++ P GT TL +AS + N + +P +
Sbjct: 675 PFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSV 734
Query: 675 GGPSPSPVGSPVGSNQ----SRSGPISPASIPGSQMPPQPPGSQSESSSHPA---LSQSP 727
PS P G+P G+ + S + ++P + + P + G+ + +SS L+ SP
Sbjct: 735 PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSP 794
Query: 728 MPQERGFMAGTQRNP-QMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
P T+R P + GP ++S SP +SF NS G
Sbjct: 795 SPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE------ASFLPENSLSFQG--- 845
Query: 787 SQYGPQGNYS-RPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 845
S+ P +S PP+ G P+ S P G++ +P P+
Sbjct: 846 SKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT----------------LPPKETPTPS 889
Query: 846 MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
+ N PFP GP P A + A A+ +++ ++R
Sbjct: 890 VVNLPFPKE-------------------GPATP-----APKQAPALSMTSSSPKKARATP 925
Query: 906 FPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSP-GES 964
P G+ AS SP P +++ + + P + +P + A A SP G
Sbjct: 926 AP----KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA----ATPPSPKGGP 977
Query: 965 KLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEE 1024
P P A TP P K ++ S V T
Sbjct: 978 ATPSPKGAPTPPAATP-PSPKGGPATPSPKGAPTPPAV-----------------TPPSP 1019
Query: 1025 RGSPVSS-LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSL 1083
+GSP ++ P P A + K AT L G ++ A++L
Sbjct: 1020 KGSPAATPFPKGASTP---------------PAATPPSPKGSPAATPLPKGAPTTPAATL 1064
Query: 1084 KKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSN 1143
+G PP T PK P +P+ G+ P +
Sbjct: 1065 PSP----KGGPATPSLKGAPTPPAA-----TPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Query: 1144 SMAEVPGDLKPPTPASTP----HGQMTPMQGGRSSTISVHDP-----FSDVSDSSFPKRN 1194
+A P P TPA+TP G TP G +T + P + P
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1175
Query: 1195 SMTPNAPYQQGMSMPDVMG--RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMY 1252
+ TP +P + G++ P G P P GG+ P T P S +
Sbjct: 1176 AATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAATPPSPKGGLA 1233
Query: 1253 NQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP 1312
SP GA + P +G P+ PP G P P
Sbjct: 1234 TPSPKGAPTT--------------------PAATPPSPKGGPATPPPKGAPTPPA-ATPP 1272
Query: 1313 NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQ-------- 1364
+ K G+ PP K S + + G+ + P P +
Sbjct: 1273 SLK---GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329
Query: 1365 --YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQG 1422
P P + G P GGP SS EGP P
Sbjct: 1330 KGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP-----------PAATPSH 1378
Query: 1423 PGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITR----PP 1478
GGP PP P +P + + S P+ + P A P+TR P
Sbjct: 1379 KGGPAMTPPSPKRGPA----IPSPKGDPTS--PAVI----PLSPKKAPATPVTREGAATP 1428
Query: 1479 QPSYQTPPSL-PNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGP 1537
TPP++ P + +AP+ + +P P PS K PT+P VT P
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPATS----------APKGGPATPSSKGD---PTLPA--VTPP 1473
Query: 1538 PPQPPPIRREI 1548
P+ PP +++
Sbjct: 1474 SPKEPPAPKQV 1484
Score = 70.5 bits (171), Expect = 2e-11
Identities = 215/1020 (21%), Positives = 327/1020 (32%), Gaps = 168/1020 (16%)
Query: 617 PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS------PFSPHASPHL 670
P D +G GT ++A T S +++P + P P AS
Sbjct: 649 PLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTAS--- 705
Query: 671 SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQ--PPGSQ-----SESSSHPAL 723
+ P PSP +P+ + P P S+P +PP PPG++ S +S+ +
Sbjct: 706 ENCPVAPSPQNTCAPLATLVL--APEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPV 763
Query: 724 SQSPM--PQERGFMAGTQRNPQMAQY---GPQQTGPSMSPHPSPGGQMHAGISSFQQSNS 778
+ SP P E + T + Y P G S+SP +
Sbjct: 764 ASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTK------------RPPTK 811
Query: 779 SGTYGPQMSQYGPQGNYSRPPA---YSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 835
G+ GP P GN S P + S +P S S G + H P P GA
Sbjct: 812 KGSAGPDT----PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATT---HSPTPPSPKGA 864
Query: 836 VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 895
PSA P + +P + P GP P A + A A+ +
Sbjct: 865 PT----PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP-----APKQAPALSMTS 915
Query: 896 ANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL 955
++ ++R P G+ AS SP P +++ + + P + +P + A+
Sbjct: 916 SSPKKARATPAP----KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 956 ADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWV 1015
+ P P P A TP P K ++ S V
Sbjct: 972 SPKGGPAT---PSPKGAPTPPAATP-PSPKGGPATPSPKGAPTPPAV------------- 1014
Query: 1016 DRYLTFMEERGSPVSS-LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG 1074
T +GSP ++ P P A + K AT L G
Sbjct: 1015 ----TPPSPKGSPAATPFPKGASTPP---------------AATPPSPKGSPAATPLPKG 1055
Query: 1075 TSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGP 1134
++ A++L +G PP T PK P +P+ G+ P
Sbjct: 1056 APTTPAATLPSPK----GGPATPSLKGAPTPPAA-----TPPSPKGGPATPSPKGAPMPP 1106
Query: 1135 QTPQSTGSNSMAEVPGDLKPPTPASTPH----GQMTPMQGGRSSTISVHDP-----FSDV 1185
+ +A P P TPA+TP G TP G +T + P +
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP 1166
Query: 1186 SDSSFPKRNSMTPNAPYQQGMSMPDVMGR--MPYEPNKDPFGGMRKVPGSSEPFMTQGQM 1243
P + TP +P + G++ P G P P GG+ P T
Sbjct: 1167 PPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAAT 1224
Query: 1244 PNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGH 1303
P S + SP GA + P +G P+ PP G
Sbjct: 1225 PPSPKGGLATPSPKGAPTT--------------------PAATPPSPKGGPATPPPKGAP 1264
Query: 1304 QPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQG 1363
P P+ K G+ PP K S + + G+ + P P
Sbjct: 1265 TPPA-ATPPSLK---GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320
Query: 1364 Q----------YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARND- 1412
+ P P + G P GGP SS EGP +
Sbjct: 1321 KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKG 1380
Query: 1413 --MPYPYQNRQGPGGPTQA--PPYPGMNRTDDMMVPDQRINHE-SQWPSHVSQRQPYMS- 1466
P ++GP P+ P P + P + E + PS P ++
Sbjct: 1381 GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTP 1440
Query: 1467 -----SSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMK 1521
+ A+ P P PS + P+LP +P + + SP K+P P+
Sbjct: 1441 VSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM 1500
Query: 1522 MQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
+P V S P P RR+ P ++ + K + K+ + P A V
Sbjct: 1501 GAPTLPAVIPSS-PKEVPATPSSRRDPIAPTATLLSK----KTPATLAPKEALIPPAMTV 1555
Score = 67.4 bits (163), Expect = 1e-10
Identities = 122/518 (23%), Positives = 176/518 (33%), Gaps = 82/518 (15%)
Query: 380 PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRS 439
P + PP P P A + G + + PA A +Q
Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQA- 908
Query: 440 HPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQR 499
PA+S + P R+ +P + P G + P + P P P G P P+
Sbjct: 909 -PALSMTSSSPKKARATPAPKG--IPASPSPKGAPTPPAATP----PSPKGGPATPSPKW 961
Query: 500 YPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ 559
P TP A P G AT PP G P
Sbjct: 962 AP------TPPAAT----PPSPKGGPATPSPKGAPTPPAATPPSPKG---GPATPSPKGA 1008
Query: 560 PQPPHL-PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 618
P PP + PP + P+ + P+ G + P P P P+
Sbjct: 1009 PTPPAVTPPSPKGSPAATPF---PK--------GASTPPAATPPSPKGS---------PA 1048
Query: 619 SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP- 677
+ P G+ PT ATL S + S +G + PA +P SP P S G P
Sbjct: 1049 ATPLPKGA----PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 678 -----SPSPVGSPVGSNQSRSGPISPASIP----GSQMPPQPPGSQSESSSHP-----AL 723
PSP G + + + P +PA+ P G P P G+ + ++ P L
Sbjct: 1105 PPAATPPSPKGG-LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163
Query: 724 SQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP---HPSPGGQMHAGISSFQQSNSSG 780
+ P A T +P+ P G +P PSP G G+++ +
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG----GLATPSPKGAPT 1219
Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
T P + P+G + P+ G P+ + P G A G P+ P P
Sbjct: 1220 T--PAATPPSPKGGLA-TPSPKGAPTTPAATPPSPKGGPATPPPKG-APTPPAATPP--- 1272
Query: 841 MPSAGMQNRPFPG--NMSSMTPSSPGMSQQGGPGMGPP 876
G+ P G N + +TP SP +GGP PP
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSP----KGGPATSPP 1306
Score = 45.4 bits (106), Expect = 6e-04
Identities = 114/534 (21%), Positives = 176/534 (32%), Gaps = 69/534 (12%)
Query: 1104 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPA---ST 1160
PPP+ T P PPSP + P+ +T + + G L P+P +T
Sbjct: 1166 PPPKGAPT-----TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 1161 PHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTP---NAPYQQGMSMPDVMGRMPY 1217
P +GG ++ P + + PK TP AP + P + G +
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT 1280
Query: 1218 EPNK-----------DPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMG 1266
P+K P GG P P P S P GA + +
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAP-TPPAATPPSPKGSPGTPPPKGAPTPPAVT 1339
Query: 1267 QRQQFPYGASYDRRHEPYGQQYP-------GQGPPSGQPPYGGHQPGLYPQQPNYKRHMD 1319
P G P + P G PP+ P + G P + P P +
Sbjct: 1340 PPS--PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG-PAMTPPSPKRGPAIP 1396
Query: 1320 GMYGPPAKRHEGDMYNMQYSSQ---QQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQG 1376
G P + + + ++ G + P P+ + P + G
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA-PATSAPKGG 1455
Query: 1377 PGQIQTHGIP---------PQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPT 1427
P + G P P+ P Q ++S P++ A M P P P
Sbjct: 1456 PATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAP-ATPAPMGAPTLPAVIPSSPK 1514
Query: 1428 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQ--PSYQTP 1485
+ P P R D + P + +S++ P ++ A + + P PS +
Sbjct: 1515 EVPATPSSRR--DPIAPTATL---------LSKKTP--ATLAPKEALIPPAMTVPSPKKT 1561
Query: 1486 PSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTV----PTSQVTGPPPQP 1541
P++P +P+S + S ++PS PS K + P V P T P P
Sbjct: 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTP 1621
Query: 1542 P-PIRREITFPPGSVEASQPVLKQRRK--ITSKDIVTPEAWRVMMSLKSGLLAE 1592
P P + T P S PV K TS VT + + GL A+
Sbjct: 1622 PSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675
Score = 43.9 bits (102), Expect = 0.002
Identities = 274/1278 (21%), Positives = 410/1278 (32%), Gaps = 220/1278 (17%)
Query: 365 LTSPSPMMRSYGGSYPEYSSPSAPP------PPPSQPQSQAAAAGAAA----GGQQAAAG 414
L P P S G + P ++P AP PP P + A A+ A G ++A
Sbjct: 78 LEVPFPQSSS-GTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAP 136
Query: 415 MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
+ L + S A+ S P+++ G + S +P+ P K
Sbjct: 137 LALVA-LAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLS--APIAPSEPK-------- 185
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKET--- 531
+N + P + P P G+ PP + TP MA +Q SG A+ +T
Sbjct: 186 TNLNKVPSEVVPNPKGTPSPPCIVS-TVPYHCVTP--MASIQ------SGVASLPQTTPT 236
Query: 532 --FWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
+ PQ +S Q P S + P PP A L +QS P SQ+
Sbjct: 237 TTLAIASPQVKDTTISSVLISPQNPG-SLSLKGPVSPPAALSLSTQSL----PVVTSSQK 291
Query: 590 GYGTRSQP--PLAPGK---PNHED----LNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 640
G + P P++ G P H+ + L+ Q PS+L D T T+S
Sbjct: 292 TAGPNTPPDFPISLGSHLAPLHQSSFGSVQLLGQTGPSALSD----------PTVKTISV 341
Query: 641 AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPAS 700
S++G+ S P+Q P +P + PV +P GP + +S
Sbjct: 342 DHSSTGA-------SYPSQRSVIPPLPSRNEVVPATVAAFPVVAP----SVDKGPSTISS 390
Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
I S P GS + ++S +LS + + T P +AQ G +
Sbjct: 391 ITCS-----PSGSLNVATSF-SLSPTTSLILKSSPNATYHYPLVAQMPVSSVGTTPLVVT 444
Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
+P A ++F+ + P MS GP N P + + + A + P ++
Sbjct: 445 NPCTIAAAPTTTFEVATC---VSPPMSS-GPISNIE-PTSPAALVMAPVAPKEPSTQVAT 499
Query: 821 NNQMHGQGPSQPCGAVP--LGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP 878
++ P P P L +PS+ + P ++ ++ S +G P P
Sbjct: 500 TLRI----PVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASL-----EGAP-FSPAQA 549
Query: 879 TVNRKAQEAAAAVMQAAANSAQSRQG--SFPGMNQS----------------GLMASSSP 920
+ K ++QAA ++ S Q S P + S G ASS
Sbjct: 550 GLTTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMT 609
Query: 921 YSQPMNNSSSLMNTQ--APPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKE-- 976
+N+S+S++ T A P S P + +S A + + P A G
Sbjct: 610 SPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTY 669
Query: 977 --------EGTPQPESKSKKSSSSTTTGEKITKVYE----LGNEPERKLWVDRYLTFMEE 1024
EGT K+ T T + + P+ L E
Sbjct: 670 TTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPE 729
Query: 1025 --RGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS 1082
+ P SLP G P K++ G++ + S ++A++
Sbjct: 730 IPKSVPSPSLPPAGTPP--------GTKKVDGISHTSALAPVASSPKECPTEDSGASATA 781
Query: 1083 LKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS---GSLQGPQTPQS 1139
K + YL + P P S K+P + S G+L P +P
Sbjct: 782 SSKGTLTYL---------ADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE 832
Query: 1140 TG---SNSMA-----EVPGDLKPPTPASTPHGQMTPMQGGRSSTISV-----HDPFSDVS 1186
NS++ + P PTP S P G TP S V P V
Sbjct: 833 ASFLPENSLSFQGSKDSPATTHSPTPPS-PKGAPTPSAVTPLSPKGVTLPPKETPTPSVV 891
Query: 1187 DSSFPKRNSMTP---NAPYQQGMSMPDVMGRMPYEPNKDPFG----GMRKVPGSSEPFMT 1239
+ FPK TP AP S R P P G P ++ P
Sbjct: 892 NLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK 951
Query: 1240 QGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPP 1299
G P + P+ + G P GA P P GP + P
Sbjct: 952 GG--PATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATP---PSPKGGPATPSPK 1006
Query: 1300 YGGHQPGLYPQQPN----YKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSG 1355
P + P P G PPA + + + +
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066
Query: 1356 PDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPY 1415
P P P + P PP GGP S P MP
Sbjct: 1067 PKGGPAT-----PSLKGAPTPPA-----ATPPSPKGGPATPSPKGAP----------MP- 1105
Query: 1416 PYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPIT 1475
P P G PP+ G T P + + P A P
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPP-----------KGAPTTPAA 1154
Query: 1476 RPPQP--SYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQ 1533
PP P TPP + A +P S + L SP +P P+ P P
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTPA-----ATPPSPKGG 1208
Query: 1534 VTGPPPQPPPIRREITFP 1551
+ P P+ P T P
Sbjct: 1209 LATPSPKGAPTTPAATPP 1226
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 91.3 bits (225), Expect = 1e-17
Identities = 206/877 (23%), Positives = 278/877 (31%), Gaps = 139/877 (15%)
Query: 102 GGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEH-PGLGALGTQQPPVAVP 160
G +GGQ G P S P + + G G+ ++ G G+ Q
Sbjct: 324 GQGHGCVSGGQPSGCGQPE-SNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQ 382
Query: 161 GGGGGPAAVPEFNNYYGSAAPASG-------------GPGGRAGPCFDQHGG--QQSPGM 205
G GG + + YGS S G G F+QHG QS G
Sbjct: 383 YGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSFEQHGTGLSQSSGF 442
Query: 206 GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGG 264
S G HE S + GY + G+ G G G G GSG
Sbjct: 443 EQHVCGSGQTCG----------QHE----STSSQSLGYDQHGSSSGKTSGFGQHGSGSGQ 488
Query: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV------LSSPRQQGG 318
G G G+G + + + ++G G G G S+G+G SS Q G
Sbjct: 489 SSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGS 548
Query: 319 GMMMGPGGG-------------GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
G G G G S G G + +G QH SG+ Q
Sbjct: 549 GSSQSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGS----GQSS 604
Query: 366 TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ--------AAAAGAAAGGQQAAAGMGL 417
RS SY ++SS S+ Q S+ + + + G Q +G G
Sbjct: 605 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ 664
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
G + + + Q S S G G G SQ S Q G G +
Sbjct: 665 SSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHG--FGSSQSSGYGQHGSSSGQTSGFGQH 722
Query: 477 PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKE--TFWL 534
S Q SS G +G Q G G G +G + + SG +++ + +
Sbjct: 723 ELSSGQSSS---FGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESR-SGQSSYGQHSSGSS 778
Query: 535 MPPQYGQQG---VSGYCQQGQQP--------YYSQQPQPP----HLPPQAQYLPSQSQQR 579
YGQ G SG+ Q G Y S Q H Q +
Sbjct: 779 QSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHES 838
Query: 580 YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 639
Q Q G G+ + + Q R SS +G +
Sbjct: 839 RSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFG 898
Query: 640 SAVSASGSTSSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP 698
+ SG S G +S QS + H S S G S G G Q RSG
Sbjct: 899 QHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGS--- 955
Query: 699 ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP 758
G GS S SS +S + GF R+ Q + YG +G S S
Sbjct: 956 ----GQSSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQ-SNYGQHGSGSSQSS 1010
Query: 759 ----HPSPGGQ------------MHAGI----SSFQQSNSSGTYGP---QMSQYGPQGNY 795
H S GQ ++G S QS+ G +G Q S +G +
Sbjct: 1011 GYGQHGSSSGQTTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESR 1070
Query: 796 SRPPAYS--GVPSASYSGPG----------------PGMGISANNQMHGQGPSQPCGAVP 837
SR +Y G S+ SG G PG G S+ +G G Q G
Sbjct: 1071 SRQSSYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQ 1130
Query: 838 --LGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG 872
G S+G + SS G SQ G G
Sbjct: 1131 HGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCG 1167
Score = 87.8 bits (216), Expect = 1e-16
Identities = 204/921 (22%), Positives = 291/921 (31%), Gaps = 137/921 (14%)
Query: 60 QQQQQQQQQQQQQQHPISNNNSLG--------GAGGGAPQPGPDMEQP----QHGGAKDS 107
Q + Q QH S+ + G G G Q G Q QHG
Sbjct: 455 QHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQ 514
Query: 108 AAG-GQ-ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG 165
++G GQ G + G+ G + G G G+++ G G
Sbjct: 515 SSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETS-GFGQHGLG 573
Query: 166 PAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS 221
F Y + +SG G G F QH + HS+ ++ + G
Sbjct: 574 SGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQ 633
Query: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
Q S G S + G+ + G+G G G G G G G +G +
Sbjct: 634 HGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSY 693
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
++ ++G G G G ++G+G + G G G+ S + G
Sbjct: 694 GQHGFGSSQSSGYGQHGSSSGQTSGFG----QHELSSGQSSSFGQHGSGSGQSSGFGQHG 749
Query: 342 GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS-QAA 400
G + +G QH S RS SY ++SS S+ Q S Q +
Sbjct: 750 SGSGQSSGFGQHES-----------------RSGQSSYGQHSSGSSQSSGYGQHGSRQTS 792
Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPM 460
G G + G G QY + S A Q + G RS S
Sbjct: 793 GFGQHGSGSSQSTGFG-------QYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSY 845
Query: 461 DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
+G GS+ QSS Y G +G Q G + G +G Q
Sbjct: 846 GQ--------HGSGSS------QSSGY--GQHGSSSGQTSGFGQHRSSSGQYSGFG---Q 886
Query: 521 QDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY 580
SG +GQ G GQ + Q H Q+ SQ
Sbjct: 887 HGSGSG--------QSSGFGQHGTGS----GQYSGFGQHESRSHQSSYGQHGSGSSQS-- 932
Query: 581 QPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 640
GYG G + + Q S G +G +
Sbjct: 933 --------SGYGQH-------GSSSGQTFGFGQHRSGSGQSSGFGQHGS-GSGQSSGFGQ 976
Query: 641 AVSASGSTSSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA 699
S SG +S G +S +QS + H S S G S G G Q RS
Sbjct: 977 HESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTGFGQHRSSS---- 1032
Query: 700 SIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP- 758
G GS S+ SS + Q GF R+ Q + YG +G S S
Sbjct: 1033 ---GQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQ-SSYGQHGSGSSQSSG 1088
Query: 759 ---HPSPGGQMHAGISSFQ----QSNSSGTYGP---QMSQYGPQGN-------YSRPPAY 801
H S GQ +G + QS+ G YG Q S +G G+ +++
Sbjct: 1089 YGQHGSNSGQT-SGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYR 1147
Query: 802 SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLG--RMPSAGMQNRPFPGNMSSMT 859
SG S G G G GP+ G G S+G Q+ G +
Sbjct: 1148 SGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSG-QHISDSGQSTGFG 1206
Query: 860 PSSPGMSQQGGPGMGPPM-----PTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 914
G Q G G G TV+ + + + +S QS QG Q+G
Sbjct: 1207 QYGSGSGQSTGLGQGESQQVESGSTVHGRQETTHGQTINTTRHS-QSGQGQ---STQTGS 1262
Query: 915 MASSSPYSQPMNNSSSLMNTQ 935
+ S NS S ++++
Sbjct: 1263 RVTRRRRSSQSENSDSEVHSK 1283
Score = 73.6 bits (179), Expect = 2e-12
Identities = 156/780 (20%), Positives = 245/780 (31%), Gaps = 91/780 (11%)
Query: 60 QQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
Q Q QH + G G G+ Q Q G + S G G
Sbjct: 620 QHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQ-STGFGQYGSGSGQSSGFGQHVSGSGQS 678
Query: 120 LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSA 179
+ G+ G + G G G+ + G + +GS
Sbjct: 679 SGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSG 738
Query: 180 APASGG-----PGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
+ S G G F QH + HS+ ++ + G Q S G
Sbjct: 739 SGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHG 798
Query: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
S + G+ + G+G G G G G G G G + + + ++ ++G
Sbjct: 799 SGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGY 858
Query: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHP 354
G G G ++G+G + G G G G+ S + G G +++G QH
Sbjct: 859 GQHGSSSGQTSGFG----QHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHE 914
Query: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA----------AAAGA 404
S RS+ SY ++ S S+ Q S + + +G
Sbjct: 915 S-----------------RSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQ 957
Query: 405 AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPM 463
++G Q +G G G + + + Q S + S G G G SQ S
Sbjct: 958 SSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHG--SGSSQSSGYGQH 1015
Query: 464 VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQD 522
Q G G + S Q S G +G Q G G G +G QY +
Sbjct: 1016 GSSSGQTTGFGQHRSSSGQYSG---FGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSR 1072
Query: 523 SGDATWKETFWLMPPQYGQQG-----VSGYCQQGQQP-----YYSQQPQPPHLPPQAQYL 572
YGQ G SGY Q G + +P QY
Sbjct: 1073 QS-------------SYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYG 1119
Query: 573 PSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPT 632
Q Q G GT A + + Q SS G + +
Sbjct: 1120 SGSGQ-----SSGFGQHGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQ-HESGS 1173
Query: 633 GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR 692
G + VS S + SS G H S S G S G G Q
Sbjct: 1174 GPTTSFGQHVSGSDNFSSSGQ-----------HISDSGQSTGFGQYGSGSGQSTGLGQGE 1222
Query: 693 SGPI-SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
S + S +++ G Q + Q+ +++ + S + G +R ++ +
Sbjct: 1223 SQQVESGSTVHGRQ---ETTHGQTINTTRHSQSGQGQSTQTGSRVTRRRRSSQSENSDSE 1279
Query: 752 TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 811
+S S +H S + S Q + +G +G+ +R +SG ++ +G
Sbjct: 1280 VHSKVSHRHSE--HIHTQAGSHYPKSGSTVRRRQGTTHGQRGDTTR-HGHSGHGQSTQTG 1336
Score = 67.8 bits (164), Expect = 1e-10
Identities = 196/871 (22%), Positives = 278/871 (31%), Gaps = 116/871 (13%)
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
GS+ SG G R+ C G S G G +AS++ Q+ G +Q
Sbjct: 264 GSSCSGSGDSGRRSHAC----GYSNSSGCGRPQNASSSC----------QSHRFGGQGNQ 309
Query: 237 CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGG-------------GGGAGAGGA--GAGAV 281
++ + G GG G G GG G G G GA G G
Sbjct: 310 FSYIQSGCQSGIKGGQGHGCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQ 369
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAG---YGVLSSPRQQGGGMMMGP----GGGGAASLSK 334
++ ++ G G GG S G YG G G + S S
Sbjct: 370 WRTGSSQSSCCGQYGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSF 429
Query: 335 AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
G+ G + +G QH G+ T Q ++ S + Y ++ S S Q
Sbjct: 430 EQHGT---GLSQSSGFEQHVCGSGQTCGQHESTSSQSL-----GYDQHGSSSGKTSGFGQ 481
Query: 395 PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR 454
+ +G ++G Q +G G G + + + Q S S G G R
Sbjct: 482 ---HGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGF-GQHESR 537
Query: 455 SQGSPMDPMVMKRPQLYGMGSNPHSQPQ----------QSSPYPGGSYGPPGPQRYPIGI 504
S+ S Q G G + QS+ + G YG Q G
Sbjct: 538 SRQSSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQSTGF--GQYGSGSGQSSGFGQ 595
Query: 505 QGRTPGAMAGMQYPQQQDSGDATWKE--TFWLMPPQYGQQG---VSGYCQQGQQP----- 554
G G +G + + SG +++ + + YGQ G SG+ Q G
Sbjct: 596 HGSGSGQSSGFGQHESR-SGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTG 654
Query: 555 ---YYSQQPQPP----HLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
Y S Q H+ Q + Q G+G+ +
Sbjct: 655 FGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSG 714
Query: 608 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGD-QSNPAQSPFSPHA 666
+ Q SS S +G + S SG +S G +S QS + H+
Sbjct: 715 QTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHS 774
Query: 667 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS 726
S S G S S G + S S + GS Q S S
Sbjct: 775 SGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSG------ 828
Query: 727 PMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
Q GF R+ Q + YG +G S S G S F Q SS
Sbjct: 829 ---QSSGFGQHESRSHQ-SSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGF 884
Query: 787 SQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQ--MHGQGPSQPCGAVPLGRMPSA 844
Q+G S G S YSG G S + HG G SQ G G S+
Sbjct: 885 GQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHG--SSS 942
Query: 845 GM-----QNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSA 899
G Q+R G S G Q G G + ++ Q + S+
Sbjct: 943 GQTFGFGQHRSGSGQSSGFGQHGSGSGQSSGFGQ-------HESGSGKSSGFGQHESRSS 995
Query: 900 QSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMM 959
QS G + SG + SS Y Q + SSS T + + + + G
Sbjct: 996 QSNY----GQHGSG-SSQSSGYGQ--HGSSSGQTTGFGQHRSS----SGQYSGFGQHGSG 1044
Query: 960 SPGESKLPLPLKADGKEEGTPQPESKSKKSS 990
S S G+ G Q ES+S++SS
Sbjct: 1045 SDQSSGFGQHGTGSGQSSGFGQYESRSRQSS 1075
Score = 50.4 bits (119), Expect = 2e-05
Identities = 146/676 (21%), Positives = 210/676 (31%), Gaps = 79/676 (11%)
Query: 694 GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG--FMAGTQRNPQMAQYGPQQ 751
G +S G P P SQS S ++ PQ G + G+ ++ QYG
Sbjct: 328 GCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQYG--- 384
Query: 752 TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 811
+G S S S G + F S+SS + + QYG + S S+
Sbjct: 385 SGGSQSC--SNGQHEYGSCGRFSNSSSSNEFS-KCDQYGSGSSQS----------TSFEQ 431
Query: 812 PGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPGMSQQGG 870
G G+ S+ + H G Q CG S G Q+ G S G Q G
Sbjct: 432 HGTGLSQSSGFEQHVCGSGQTCGQHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSG 491
Query: 871 PGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSS 929
G G + Q + + + S G G Q + S Y Q + SS
Sbjct: 492 FGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSS 551
Query: 930 SLMNTQAPPYSMAPAMVNSSAASVGLADMMSPG----------ESKLPLPLKADGKEEGT 979
Q+ Y + S GL S G S G+ G
Sbjct: 552 -----QSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF 606
Query: 980 PQPESKSKKSS-SSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKK 1038
Q ES+S +SS ++G + Y G R+ + + GS S G+
Sbjct: 607 GQHESRSGQSSYGQHSSGSSQSSGY--GQHGSRQT------SGFGQHGSGSSQSTGFGQY 658
Query: 1039 PLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKI 1098
+ + + G Q + G + S Y Q+ F
Sbjct: 659 GSGSGQSSGFGQHVSGSGQSS--------------GFGQHESRSGHSSYGQHGFGSSQSS 704
Query: 1099 ERGEEPPPEVFSTGDTKK--QPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1156
G+ S+G T Q +L ++ G G + QS+G G
Sbjct: 705 GYGQHGS----SSGQTSGFGQHELSSGQSSSFGQ-HGSGSGQSSGFGQHGSGSGQ----- 754
Query: 1157 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1216
S+ GQ G S+ H S S S + + S + Q G G
Sbjct: 755 --SSGFGQHESRSG--QSSYGQHSSGSSQS-SGYGQHGSRQTSGFGQHGSGSSQSTGFGQ 809
Query: 1217 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1276
Y G + S GQ + S Q Y Q SG+ + G GQ S
Sbjct: 810 YGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTS 869
Query: 1277 YDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNM 1336
+H QY G GQ G Q + Q G ++ H+
Sbjct: 870 GFGQHRSSSGQYSG----FGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQH 925
Query: 1337 QYSSQQQEMYNQYGGS 1352
S Q Y Q+G S
Sbjct: 926 GSGSSQSSGYGQHGSS 941
Score = 34.3 bits (77), Expect = 1.4
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 23/151 (15%)
Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ---RQQFPYG--ASYD 1278
FG G S F GQ + S Q Y Q SG+ + G GQ RQ +G S
Sbjct: 745 FGQHGSGSGQSSGF---GQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGS 801
Query: 1279 RRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQY 1338
+ +GQ G G +G +G H G Q + +H ++ H+
Sbjct: 802 SQSTGFGQYGSGSGQSAG---FGQHGSG-SGQSSGFGQH-------ESRSHQSSYGQHGS 850
Query: 1339 SSQQQEMYNQYG---GSYSG-PDRRPIQGQY 1365
S Q Y Q+G G SG R GQY
Sbjct: 851 GSSQSSGYGQHGSSSGQTSGFGQHRSSSGQY 881
Score = 34.3 bits (77), Expect = 1.4
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
FG G S F GQ + S Q Y Q SG+ + G GQ S +
Sbjct: 1051 FGQHGTGSGQSSGF---GQYESRSRQSSYGQHGSGSSQSSGYGQH------GSNSGQTSG 1101
Query: 1284 YGQQYPGQGPPSGQPPYG 1301
+GQ PG G SG YG
Sbjct: 1102 FGQHRPGSGQSSGFGQYG 1119
Score = 33.9 bits (76), Expect = 1.8
Identities = 53/208 (25%), Positives = 60/208 (28%), Gaps = 41/208 (19%)
Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
FG V G S F GQ + S Q Y Q G G Q YG R
Sbjct: 518 FGQHGSVSGQSSGF---GQHESRSRQSSYGQH--------GSGSSQSSGYGQYGSRETSG 566
Query: 1284 YGQQYPGQGPPSGQPPYG---GHQPGLYPQ------------------QPNYKRHMDGM- 1321
+GQ G G +G YG G G Q +Y +H G
Sbjct: 567 FGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSS 626
Query: 1322 ----YGPPAKRHEGDMYNMQYSSQQQEMYNQYG---GSYSGPDRRPI-QGQYPYPYSRER 1373
YG R S Q + QYG G SG + GQ E
Sbjct: 627 QSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHES 686
Query: 1374 MQGPGQIQTHGIPPQMMGGPLQSSSSEG 1401
G HG G Q SS G
Sbjct: 687 RSGHSSYGQHGFGSSQSSGYGQHGSSSG 714
Score = 33.5 bits (75), Expect = 2.4
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 743 QMAQYGPQQTGPSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 801
Q Q G + G S H S ++H+G+S ++S TYG SQ+G G
Sbjct: 2089 QSTQRGSRTAGRRGSGHSESSDSEVHSGVS---HTHSGHTYGQARSQHGESG-------- 2137
Query: 802 SGVPSASYSGPGPGMGISANNQMHGQ---GPSQPCGAVPLGRMPSAGMQNR--------- 849
SA + G G + + HGQ G S G+ GR S+ ++
Sbjct: 2138 ----SAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEAS 2193
Query: 850 -PFPGNMSSMTPSSPGMSQQGGPG 872
G+ S S G S G G
Sbjct: 2194 PTHSGHTHSQAGSRHGQSGSSGHG 2217
Score = 33.1 bits (74), Expect = 3.1
Identities = 44/151 (29%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
FG G S F GQ + S Q Y Q SG+ + G GQ S +
Sbjct: 974 FGQHESGSGKSSGF---GQHESRSSQSNYGQHGSGSSQSSGYGQH------GSSSGQTTG 1024
Query: 1284 YGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQY 1338
+GQ G SG +G H G Q + +H G +G R Y
Sbjct: 1025 FGQHRSSSGQYSG---FGQHGSG-SDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHG 1080
Query: 1339 S-SQQQEMYNQYG---GSYSG-PDRRPIQGQ 1364
S S Q Y Q+G G SG RP GQ
Sbjct: 1081 SGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQ 1111
Score = 32.0 bits (71), Expect = 6.8
Identities = 48/178 (26%), Positives = 57/178 (32%), Gaps = 33/178 (18%)
Query: 1246 SSMQDMYNQ--SPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQP 1298
SS Y Q S SG S G GQ F S + +GQ G G SG
Sbjct: 700 SSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSG-- 757
Query: 1299 PYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1353
+G H+ Q +Y +H G YG R S Q + QYG
Sbjct: 758 -FGQHES--RSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGS 814
Query: 1354 ----------SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEG 1401
SG + GQ+ SR GQ HG G Q SS G
Sbjct: 815 GQSAGFGQHGSGSGQSSGFGQHE---SRSHQSSYGQ---HGSGSSQSSGYGQHGSSSG 866
Score = 32.0 bits (71), Expect = 6.8
Identities = 49/196 (25%), Positives = 63/196 (32%), Gaps = 44/196 (22%)
Query: 1241 GQMPNSSMQDMYNQSPSGAMSNLGMGQR-----QQFPYG---------------ASYDRR 1280
GQ + S Q Y Q SG+ + G GQ Q F +G S +
Sbjct: 911 GQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQSSGFGQHGSGSGQ 970
Query: 1281 HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYN 1335
+GQ G G SG +G H+ Q NY +H G YG G
Sbjct: 971 SSGFGQHESGSGKSSG---FGQHES--RSSQSNYGQHGSGSSQSSGYGQHGS-SSGQTTG 1024
Query: 1336 MQYSSQQQEMYNQYGGSYSGPDRRPIQGQ----------YPYPYSRERMQGPGQIQTHGI 1385
Y+ +G SG D+ GQ + SR R GQ HG
Sbjct: 1025 FGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQ---HGS 1081
Query: 1386 PPQMMGGPLQSSSSEG 1401
G Q S+ G
Sbjct: 1082 GSSQSSGYGQHGSNSG 1097
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 91.3 bits (225), Expect = 1e-17
Identities = 95/314 (30%), Positives = 120/314 (38%), Gaps = 79/314 (25%)
Query: 58 QQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPG 117
Q QQ Q QQ S + G G + +G ++++ G Q+ P G
Sbjct: 23 QGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSS--------YSSYGQSQNTGYGTQSTPQG 74
Query: 118 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYG 177
G + G+ + +PG G QQP + G YG
Sbjct: 75 YGSTGGYGSSQSSQSSYGQQSS----YPGYG----QQPAPSSTSGS------------YG 114
Query: 178 SAAPASGGPGGRAGPCFDQ--HGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
S++ +S ++G Q +GGQQ + G S +P Q GY
Sbjct: 115 SSSQSSSYGQPQSGSYSQQPSYGGQQQ------------SYGQQQSYNPPQ----GY--G 156
Query: 236 QCNHYPGYSRPGAGGGGGGGGG----------GGGGSGGGGG----GGGAGAGGAGAGAV 281
Q N Y S GGGGGGGGG GGGSGGG G GG G+GG G
Sbjct: 157 QQNQYNSSS---GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDR 213
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
+ GGGGGGGY SS GY PR +GGG G GG G GS
Sbjct: 214 GGRGRGGSGGGGGGGGGGYNRSSGGY----EPRGRGGG-RGGRGGMG---------GSDR 259
Query: 342 GGFQRFAGQNQHPS 355
GGF +F G S
Sbjct: 260 GGFNKFGGPRDQGS 273
Score = 53.1 bits (126), Expect = 3e-06
Identities = 45/131 (34%), Positives = 45/131 (34%), Gaps = 24/131 (18%)
Query: 238 NHYPGYSRPGAGGGG--GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA----------- 284
N G R G G GG G GG GGGGSGGGG GG GG G G A
Sbjct: 376 NRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCEN 435
Query: 285 --------AAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG---PGGGGAASLS 333
A G GGG GGS G R GG G GG
Sbjct: 436 MNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFR 495
Query: 334 KAAAGSAAGGF 344
G GGF
Sbjct: 496 GGRGGGDRGGF 506
Score = 46.6 bits (109), Expect = 3e-04
Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 41/203 (20%)
Query: 704 SQMPPQPPGSQS--------ESSSHPALSQSPMPQERGFMAGTQRNPQ------------ 743
SQ QP G QS ++S + S S Q + GTQ PQ
Sbjct: 26 SQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQ 85
Query: 744 --MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN----SSGTY------GPQMSQYGP 791
+ YG Q + P P+P + SS Q S+ SG+Y G Q YG
Sbjct: 86 SSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQ 145
Query: 792 QGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPF 851
Q +Y+ P Y + S G G G N +GQ S ++ G G N+
Sbjct: 146 QQSYNPPQGYGQQNQYNSSSGGGGGGGGGGN--YGQDQS----SMSSGGGSGGGYGNQDQ 199
Query: 852 PGNMSSMTPSSPGMSQQGGPGMG 874
G S G +GG G G
Sbjct: 200 SGGGGS---GGYGQQDRGGRGRG 219
Score = 46.6 bits (109), Expect = 3e-04
Identities = 25/57 (43%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
Query: 243 YSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
++R G G GG G GG G GG GGGG G G G +GGGGGGG
Sbjct: 375 FNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGG------------FPSGGGGGGG 419
Score = 45.8 bits (107), Expect = 5e-04
Identities = 74/289 (25%), Positives = 91/289 (31%), Gaps = 59/289 (20%)
Query: 547 YCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH 606
Y QQ Q Y + QP SQQ QP S GY ++S G+ ++
Sbjct: 6 YTQQATQSYGAYPTQPGQ---------GYSQQSSQPYGQQSYSGY-SQSTDTSGYGQSSY 55
Query: 607 EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHA 666
G + GT++T S G SSQ QS+ Q
Sbjct: 56 SSY---------------GQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQ------ 94
Query: 667 SPHLSSIPG---GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQS---ESSSH 720
SS PG P+PS GS+ S P S SQ P QS + S +
Sbjct: 95 ----SSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYN 150
Query: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
P Q G YG Q+ S GG G + QS G
Sbjct: 151 PPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSS------MSSGGGSGGGYGNQDQSGGGG 204
Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGP 829
+ G YG Q R SG G G G G N G P
Sbjct: 205 SGG-----YGQQDRGGRGRGGSG-------GGGGGGGGGYNRSSGGYEP 241
Score = 45.8 bits (107), Expect = 5e-04
Identities = 44/143 (30%), Positives = 49/143 (34%), Gaps = 28/143 (19%)
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD------PLQNSHE 230
G GGP GR G GG G G S G + D +N +
Sbjct: 382 GRGGRGRGGPMGRGGY---GGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNF 438
Query: 231 GYPNSQCNHYPGYSRPGAGGGGGGGGGGG-------GGSGGGGGGGGAGAGGAGAGAVAA 283
+ N +CN G GGG GG GG GG GG GG G GG G
Sbjct: 439 SWRN-ECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGF--- 494
Query: 284 AAAAAAAAAGGGGGGGYGGSSAG 306
GG GGG GG G
Sbjct: 495 --------RGGRGGGDRGGFGPG 509
Score = 44.3 bits (103), Expect = 0.001
Identities = 43/155 (27%), Positives = 53/155 (34%), Gaps = 30/155 (19%)
Query: 50 QQLNQFQQQQQQQQQQQQQQQQ---QQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKD 106
QQ + QQQ QQQ Q QQ+ ++++ GG GGG G D GG
Sbjct: 132 QQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSG 191
Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
G Q G G G+ + G G G+ GGGG
Sbjct: 192 GGYGNQDQSGGG----------------GSGGYGQQDRGGRGRGGS---------GGGGG 226
Query: 167 AAVPEFNNYYGSAAP--ASGGPGGRAGPCFDQHGG 199
+N G P GG GGR G GG
Sbjct: 227 GGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGG 261
Score = 39.7 bits (91), Expect = 0.033
Identities = 61/263 (23%), Positives = 83/263 (31%), Gaps = 56/263 (21%)
Query: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQ---QSPGMGMMHSASAAAAGAPGSMDPLQNSH 229
N+Y A + G + G + Q Q Q G S + G Q+S+
Sbjct: 4 NDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYG--------QSSY 55
Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG------GGGGAGAGGAGAGAVAA 283
Y SQ Y S P G GG G G G G A + +G+ +
Sbjct: 56 SSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGS 115
Query: 284 AAAAAAAAAGGGGG----GGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
++ +++ G YGG YG +QQ G G + S G
Sbjct: 116 SSQSSSYGQPQSGSYSQQPSYGGQQQSYG-----QQQSYNPPQGYGQQNQYNSSSGGGGG 170
Query: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
GG GQ+Q M S GGS Y + Q Q+
Sbjct: 171 GGGGGNY--GQDQSS-----------------MSSGGGSGGGYGN-----------QDQS 200
Query: 400 AAAGAAAGGQQAAAGMGLGKDMG 422
G+ GQQ G G G G
Sbjct: 201 GGGGSGGYGQQDRGGRGRGGSGG 223
Score = 38.1 bits (87), Expect = 0.096
Identities = 46/177 (25%), Positives = 61/177 (34%), Gaps = 25/177 (14%)
Query: 1194 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1253
N T A G + P G+ + + P+G + G S+ T G +S +
Sbjct: 4 NDYTQQATQSYG-AYPTQPGQGYSQQSSQPYG-QQSYSGYSQSTDTSGYGQSSYSSYGQS 61
Query: 1254 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQ--YPGQGPP-------------SGQP 1298
Q+ + G YG+S + YGQQ YPG G S
Sbjct: 62 QNTGYGTQSTPQGYGSTGGYGSSQSSQSS-YGQQSSYPGYGQQPAPSSTSGSYGSSSQSS 120
Query: 1299 PYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSG 1355
YG Q G Y QQP+Y YG + YN QQ YN G G
Sbjct: 121 SYGQPQSGSYSQQPSYGGQQQS-YG------QQQSYNPPQGYGQQNQYNSSSGGGGG 170
Score = 37.4 bits (85), Expect = 0.16
Identities = 31/106 (29%), Positives = 37/106 (34%), Gaps = 46/106 (43%)
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
GGG G GG G GG G GG G G +GGGG GG+
Sbjct: 378 GGGNGRGGRGRGGPMGRGGYGGGG-----------SGGGGRGGF---------------- 410
Query: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLN 362
P GGG GG Q+ AG + P+ +N
Sbjct: 411 -------PSGGGG------------GGGQQRAGDWKCPNPTCENMN 437
Score = 33.5 bits (75), Expect = 2.4
Identities = 37/150 (24%), Positives = 45/150 (30%), Gaps = 23/150 (15%)
Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
G+ P Q S YG Y G + Y Q Q++G T
Sbjct: 15 GAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQST--- 71
Query: 534 LMPPQYGQQG--------VSGYCQQGQQPYYSQQPQPPHL--------PPQAQYLPSQSQ 577
P YG G S Y QQ P Y QQP P + P
Sbjct: 72 --PQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGS 129
Query: 578 QRYQPQQDMSQEGYGTRS--QPPLAPGKPN 605
QP Q+ YG + PP G+ N
Sbjct: 130 YSQQPSYGGQQQSYGQQQSYNPPQGYGQQN 159
Score = 32.3 bits (72), Expect = 5.2
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 826 GQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQ 885
GQG SQ + P G+ +G + SS G SQ G G + +
Sbjct: 22 GQGYSQQ-SSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGT----QSTPQGYG 76
Query: 886 EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPA 944
++ S+ +Q S+PG Q +S+S + SSS Q+ YS P+
Sbjct: 77 STGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPS 135
Score = 32.0 bits (71), Expect = 6.8
Identities = 45/190 (23%), Positives = 57/190 (30%), Gaps = 19/190 (10%)
Query: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396
A + G + GQ + P Q + S + G YSS Q
Sbjct: 10 ATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYG---------Q 60
Query: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ 456
SQ G + Q + G G +Q + QQ S+P + S
Sbjct: 61 SQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYG-------QQSSYPGYGQQPAPSSTSGSY 113
Query: 457 GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP---GPQRYPIGIQGRTPGAMA 513
GS +PQ P QQ S SY PP G Q G G
Sbjct: 114 GSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGG 173
Query: 514 GMQYPQQQDS 523
G Y Q Q S
Sbjct: 174 GGNYGQDQSS 183
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 90.9 bits (224), Expect = 1e-17
Identities = 212/915 (23%), Positives = 314/915 (34%), Gaps = 131/915 (14%)
Query: 104 AKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQ-QPPVAVPGG 162
AK AA P LL+ PP PA R LGA G + P+A G
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRV----LGAAGAVGRKPLAERAG 63
Query: 163 GGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM 222
G G A +PE +AP RAGP +S G + AS A G
Sbjct: 64 GIGGATIPE-------SAP-------RAGPT-------RSAGTSSRNPASRPPASGRGER 102
Query: 223 DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG-----------GGGGGGGGSGGGGGGGGA 271
P + P S G +RPG G G G G
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAAS 331
G G + A A + AAG G SA PR G S
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA------RPRPPTEGPRKSVSSASEHS 216
Query: 332 LSKAAAG-----SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
++ + SA GG QR A ++ S ATP + + PS ++P P
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLS-SSATPLSSPARSGPSARGTPRAPAHPSQPKPK 275
Query: 387 A----PPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
PP + P+ AA A G +++ + A + A P A S
Sbjct: 276 GLQALRPPQVTPPRKDAAPAL----GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT 331
Query: 443 MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGG-------SYGPP 495
TP P S +P P L + S P + P Q++ G S+ P
Sbjct: 332 CQLATPLPLAPPSPSAP--------PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 383
Query: 496 GPQRYPIGIQGRTPGAMA--GMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
P + P A+A +Q P + PP S
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQAPPSPPAS-----------PPLSPLATPSPQAPNALA 432
Query: 554 PYYSQQP--QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA--PGKPNHEDL 609
+ Q P PP P QA + P S P + + + PPL P P +
Sbjct: 433 VHLLQAPFSPPPSPPVQAPFSPPASPP-VSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 491
Query: 610 NLIQQERPSSLPDLSGSIDDL----PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPH 665
+ P + P L+ L P A + + A S + S P Q+PFSP
Sbjct: 492 SPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA----SFPGQAPFSPS 547
Query: 666 ASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS-SHPALS 724
AS +S + +P P PV + P SP + P Q P +PP ++S S P L+
Sbjct: 548 ASLPMSPL---ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLT 604
Query: 725 QSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP 784
+ P G R+P GP G S S +P + G S + ++ + P
Sbjct: 605 LALAP---GPPPPPSRSPSSTLSGPDLAGHSSSATSTP--EELRGYDSGPEGGAAASPPP 659
Query: 785 --QMSQYGPQGNYSRPP----AYSGVPSASY-----SGPGPGMGISANNQMHGQGPSQPC 833
+++ P +SR P A+ G P A +GPG G+ + G + P
Sbjct: 660 DAELAACHPAA-WSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPA 718
Query: 834 -GAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVM 892
GA+ G P + G + + SP ++ G +G +V + + ++
Sbjct: 719 PGALDPGPSPGTS-GGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHL--LSRTLL 775
Query: 893 QAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 952
AAA A G PG + G + + ++L + + ++ + ++ S AS
Sbjct: 776 LAAAEGAAGGSGGGPGGAEGGGVTGGA--------RAALSDAELGRWAELLSPLDESRAS 827
Query: 953 VGLADMMSPGESKLP 967
+ SP + P
Sbjct: 828 ITSVTSFSPDDVASP 842
Score = 84.7 bits (208), Expect = 9e-16
Identities = 161/739 (21%), Positives = 236/739 (31%), Gaps = 120/739 (16%)
Query: 327 GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
G A ++ + AGG P A PT + +S +P R E +P
Sbjct: 48 GAAGAVGRKPLAERAGGIGGATIPESAPR-AGPTRSAGTSSRNPASRPPASGRGE-RAPP 105
Query: 387 APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG-----AQYAAASPAWAAAQQRSHP 441
A P S A+G G G+ + + A A A +A +R
Sbjct: 106 AKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTS 165
Query: 442 AMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYP 501
+PGTP P M R + + + RP + +P P S P
Sbjct: 166 GPTPGTPSPAMARRSRAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSASEHSTTEP 220
Query: 502 IGIQGRTPGAMAGMQYPQQQD-SGDATWKETFWLMPPQYGQQGVSGYCQQG--QQPYYSQ 558
R P A G+Q P + S AT SG +G + P +
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSAT----------PLSSPARSGPSARGTPRAPAHPS 270
Query: 559 QPQPPHL---------PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL 609
QP+P L PP+ P+ P S PP P P+ L
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSL 330
Query: 610 NLIQQERPSSL----PDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPH 665
Q P L P S+ LP+ S A ++ GS + Q S P SP
Sbjct: 331 TC-QLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 389
Query: 666 ASPH--------LSSIPGGPSP--SPVGSPVGSNQSRS----------GPISPASIPGSQ 705
A+P L + PSP SP SP+ + ++ P SP P Q
Sbjct: 390 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 449
Query: 706 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQ 765
P PP S S S SQ+P + P P T P +P P
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 509
Query: 766 MHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMH 825
+ Q+++ PQ PPA + P + P
Sbjct: 510 L------------------QLAKPPPQA----PPALATPPLQALPSPPA--------SFP 539
Query: 826 GQGPSQPCGAVPLGRMPSAGMQNRPF---------PGNMSSMTPSSPGMSQQGGP----- 871
GQ P P ++P+ + + Q P P +S T +P GP
Sbjct: 540 GQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVS 599
Query: 872 --------GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN---QSGLMASSSP 920
GPP P + + + ++SA S G + + G AS P
Sbjct: 600 GPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP 659
Query: 921 YSQ-PMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESK-LPLPLKADGKEEG 978
++ + ++ APP A + A + PG + L + +G E
Sbjct: 660 DAELAACHPAAWSRGPAPPL----AFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESA 715
Query: 979 TPQPESKSKKSSSSTTTGE 997
TP P + S T+ G+
Sbjct: 716 TPAPGALDPGPSPGTSGGK 734
Score = 44.3 bits (103), Expect = 0.001
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 1414 PYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQP 1473
P P Q P P +PP + T P Q P P MS SA+ P
Sbjct: 442 PPPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPP 499
Query: 1474 ITRPP---------QPSYQTPPSLPNHISRA-PSP-ASFQRSLENRMSPSKSPFLPSMKM 1522
PP +P Q PP+L +A PSP ASF P ++PF PS +
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF---------PGQAPFSPSASL 550
Query: 1523 QKVMPTVPTSQVTGPPPQPPPI-RREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
P S + PPPQ PP+ + P S AS + RR T + R+
Sbjct: 551 -------PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 603
Query: 1582 MMSLKSG 1588
++L G
Sbjct: 604 TLALAPG 610
Score = 43.9 bits (102), Expect = 0.002
Identities = 64/257 (24%), Positives = 80/257 (31%), Gaps = 86/257 (33%)
Query: 90 PQPGPDMEQPQHGGAKDSAAGGQADPP-----------GPPLLSKPGDEDDAPPKM---- 134
P PGPD G + + A PP GP L P ++
Sbjct: 590 PTPGPDTSV---SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 646
Query: 135 GEPAGGRYE-----------HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
P GG HP + G PP+A G G P P PA+
Sbjct: 647 SGPEGGAAASPPPDAELAACHPAAWSRGPA-PPLAFRGAPGAPLPWP----------PAT 695
Query: 184 GGPGGRAGPC--FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYP 241
G PG G C ++ G + +A APG++DP +
Sbjct: 696 G-PGSADGLCTIYETEGPE-------------SATPAPGALDPGPS-------------- 727
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA------------GAVAAAAAAAA 289
PG GG G G G S G GA + AAA AA
Sbjct: 728 ----PGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAA 783
Query: 290 AAAGGGGGGGYGGSSAG 306
+GGG GG GG G
Sbjct: 784 GGSGGGPGGAEGGGVTG 800
Score = 39.7 bits (91), Expect = 0.033
Identities = 95/480 (19%), Positives = 149/480 (31%), Gaps = 62/480 (12%)
Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-PASTPHGQMTPMQGGRSSTISVH 1179
+PP P +L+ + G +AE G + T P S P T G S +
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93
Query: 1180 DPFSDVSDSSFPKRNSM---TPNAPYQQGMSMPDVMGRMPYEPNKDPF---GGMRKVPGS 1233
P S + + P +N+ + G + P +G+ + + G + P
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 1234 SEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGP 1293
S ++ G ++S SP+ A + G P A R P +GP
Sbjct: 154 SA--LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT------EGP 205
Query: 1294 PSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1353
H + G PA R ++ S+ + G S
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR------SLSSSATPLSSPARSGPSA 259
Query: 1354 SGPDRRPIQGQYPYPYSRERMQGP-------------GQIQTHGIPPQMMGGPLQSSSSE 1400
G R P P P + ++ P G + + + LQS +
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319
Query: 1401 G----PQQNMWAARNDMPYPYQNRQGPGGPT-----QAPPYPGMNRTDDMMVPDQRINHE 1451
P + + P P P+ P P T + P + H
Sbjct: 320 TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Query: 1452 ---SQWPSHVSQRQPYMSSSASMQPITRPPQP------------SYQTPPSLPNHISRAP 1496
S S ++ P + ++ P+ PP P S Q P +L H+ +AP
Sbjct: 380 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 439
Query: 1497 SPASFQRSLENRMSPSKS-PFLPSMKMQKVMP---TVPTSQVTGPPPQPPPIRREITFPP 1552
++ SP S P PS P P QV PP PP+ T PP
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Score = 39.3 bits (90), Expect = 0.043
Identities = 50/198 (25%), Positives = 63/198 (31%), Gaps = 14/198 (7%)
Query: 92 PGPDMEQPQHGGAKDSAA-------GGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEH 144
P + P G SA G + P G S P D + A A R
Sbjct: 619 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA--CHPAAWSRGPA 676
Query: 145 PGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRA---GPCFDQHGGQQ 201
P L G P+ P G P + Y + P S P A GP GG+
Sbjct: 677 PPLAFRGAPGAPLPWPPATG-PGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKA 735
Query: 202 SPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG 261
+ G G S+ + G + PL + + GG GGG GG
Sbjct: 736 AAGAGAGASSRSPKQARLGEL-PLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Query: 262 SGGGGGGGGAGAGGAGAG 279
GG GG A A G
Sbjct: 795 GGGVTGGARAALSDAELG 812
Score = 33.9 bits (76), Expect = 1.8
Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 16/126 (12%)
Query: 85 AGGGAPQPGPDMEQPQHGGAKDS-AAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
AG GP P A+ S AAG + P P ++P + P K A E
Sbjct: 158 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS---E 214
Query: 144 HPGLGALGTQQPPVAV---PGGGGG---PAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
H T +P A P GGG PA+ ++ ++PA GP R P H
Sbjct: 215 H------STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 268
Query: 198 GGQQSP 203
Q P
Sbjct: 269 PSQPKP 274
Score = 33.5 bits (75), Expect = 2.4
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 1104 PPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQSTGSN--------SMAEVPGDLKP 1154
PPP+ P LQ PPSP S +LQ P+ P + G + ++A PG P
Sbjct: 558 PPPQA---PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG--PP 612
Query: 1155 PTPASTPHGQMT-PMQGGRSST 1175
P P+ +P ++ P G SS+
Sbjct: 613 PPPSRSPSSTLSGPDLAGHSSS 634
Score = 32.7 bits (73), Expect = 4.0
Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 28/230 (12%)
Query: 1351 GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAAR 1410
G + P + G P PG + G+ + ++E P+++ +A
Sbjct: 100 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 159
Query: 1411 NDMPYPYQNRQGPGGPTQAPPYPGMNRTD-----DMMVPDQRINHESQWPSHVSQRQPYM 1465
R+ GPT P P M R ++ +P + + P+ P
Sbjct: 160 A--------RRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE----GPRK 207
Query: 1466 SSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKS----------P 1515
S S++ + T P P+ + PS + R P+ S S SP++S P
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQR-PASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 1516 FLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQR 1565
PS K + + QVT P P ++ P + + L+ +
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 90.5 bits (223), Expect = 2e-17
Identities = 208/836 (24%), Positives = 273/836 (32%), Gaps = 126/836 (15%)
Query: 111 GQADPPGPPLLS----KPGDEDDAPPKMGEPAG-GRYEHPGLGALGTQQPPVAVPGGGGG 165
G PPGPP ++ +PG + + P+ GEP G+ +PG L Q + PG G
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQ-GEPGPPGQQGNPGAQGLPGPQGAIGPPGEKG- 745
Query: 166 PAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPG----- 220
P P G+ P G PG P + GGQ PG G PG
Sbjct: 746 PLGKPGLPGMPGADGPP-GHPGKEGPP--GEKGGQGPPG-------PQGPIGYPGPRGVK 795
Query: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
D ++ + +PG+ G G G G G G G G GG
Sbjct: 796 GADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDP 855
Query: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
G G GY G G + P G G G + G
Sbjct: 856 GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPT 915
Query: 341 AGGFQRFAGQNQHPSGAT----PTLNQLLTSPSPMMRSYGGSYPE----YSSPSAPPPPP 392
+R P G T P N P+ G + P+ + P PP PP
Sbjct: 916 GPRGER------GPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPP 969
Query: 393 SQPQSQAAAAGAAAGGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG-- 449
+ G Q G G +G Q +R HP PG PG
Sbjct: 970 GKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETG--PMGERGHPG-PPGPPGEQ 1026
Query: 450 --PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG---------PPGP- 497
P + +G+ DP P G + P P G+ G PPGP
Sbjct: 1027 GLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPA 1086
Query: 498 ----QRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
+R P G G P + G PQ G A K P + G QG +G + G Q
Sbjct: 1087 GSPGERGPAGAAG--PIGIPGRPGPQGPP-GPAGEKGA----PGEKGPQGPAG--RDGLQ 1137
Query: 554 -PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP-------PLAPGKPN 605
P P P PP + +P Q S+ G + P P+ P+
Sbjct: 1138 GPVGLPGPAGPVGPPGED---GDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPS 1194
Query: 606 HED--------LNLIQQ---ERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQ 654
D L Q E P P G P G + L G T G
Sbjct: 1195 GADGEPGPRGQQGLFGQKGDEGPRGFPGPPG-----PVGLQG-LPGPPGEKGETGDVGQM 1248
Query: 655 SNPAQ-SPFSPHASPHLSSIPGGPSPSPVGSPVG-SNQSRSGPISPASIPGSQMPPQPPG 712
P P P +P P GP P +G+P + G +PG PP P G
Sbjct: 1249 GPPGPPGPRGPSGAPGADG-PQGP-PGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKG 1306
Query: 713 SQSE--SSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS-----PGGQ 765
+ E S + P P+ G + +P + P GP P P+ PG +
Sbjct: 1307 ERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGF-PGDPGPPGEPGPAGQDGPPGDK 1365
Query: 766 MHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPS-ASYSGPGPGMGISANNQM 824
G + +G+ GP + GP G PP G P A G G +
Sbjct: 1366 GDDG-----EPGQTGSPGP-TGEPGPSG----PPGKRGPPGPAGPEGRQGEKGAKGEAGL 1415
Query: 825 HG----QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPP 876
G GP P GA G+ G++ P P + P SPG GP MGPP
Sbjct: 1416 EGPPGKTGPIGPQGAP--GKPGPDGLRGIPGPVGEQGL-PGSPGPDGPPGP-MGPP 1467
Score = 90.1 bits (222), Expect = 2e-17
Identities = 201/802 (25%), Positives = 251/802 (31%), Gaps = 155/802 (19%)
Query: 111 GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPP--VAVPGGGGGPA- 167
G+ G P + +PG + PP PAG G GT P V PG G P
Sbjct: 450 GEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP------GPPGTMGPTGQVGDPGERGPPGR 503
Query: 168 -AVPEFNNYYGSAA-----PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS 221
+P + G P G GG AG Q+S ++ A A G G
Sbjct: 504 PGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGP 563
Query: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
M PG P GG G G G G G G G G
Sbjct: 564 MG-------------LTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPG--- 607
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
A + A G G G G G+ P ++G GP G G
Sbjct: 608 RRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSG---------PPGPPG 658
Query: 342 GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA 401
+R P G L P P R G P PP PP P
Sbjct: 659 DDGERGDDGEVGPRG-------LPGEPGP--RGLLG-------PKGPPGPPGPP------ 696
Query: 402 AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD 461
GQ G ++G Q P Q+ +P + G PGP + G P +
Sbjct: 697 GVTGMDGQPGPKG-----NVGPQGEPGPPG-----QQGNPG-AQGLPGPQ--GAIGPPGE 743
Query: 462 PMVMKRPQLYGM--GSNPHSQPQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQY 517
+ +P L GM P P + P PG G GPPGPQ PIG G P + G
Sbjct: 744 KGPLGKPGLPGMPGADGPPGHPGKEGP-PGEKGGQGPPGPQG-PIGYPG--PRGVKGA-- 797
Query: 518 PQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQ 577
G K T + G+ G G+ +G + + P+ + P +
Sbjct: 798 -----DGIRGLKGT----KGEKGEDGFPGF--KGDMGIKGDRGEIGPPGPRGEDGPEGPK 846
Query: 578 QRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEAT 637
R P D G PP GK +P L G
Sbjct: 847 GRGGPNGDPGPLG------PPGEKGK--------------LGVPGLPGYPGRQGPKGSIG 886
Query: 638 LSSAVSASGSTSSQGDQSNPA----QSPFSPHASPHLSSIPGGPSP-------SPVGSPV 686
A+G +G P + P P I G P P P G P
Sbjct: 887 FPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPP- 945
Query: 687 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 746
+ +GP P PG + PP PPG HP E GF T
Sbjct: 946 -GERGPNGPQGPTGFPGPKGPPGPPGKDG-LPGHPG-----QRGETGFQGKTGPPGPPGV 998
Query: 747 YGPQ----QTGP-SMSPHPSPGGQM-HAGISSFQQSNSSGTYGPQMSQYGPQG--NYSRP 798
GPQ +TGP HP P G G+ + GT G GP G P
Sbjct: 999 VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGL--AGKEGTKGDP----GPAGLPGKDGP 1052
Query: 799 PAYSGVP-SASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
P G P GP +G+ N GP P G+ P R P+ PG
Sbjct: 1053 PGLRGFPGDRGLPGPVGALGLKGNE--GPPGPPGPAGS-PGERGPAGAAGPIGIPGRPGP 1109
Query: 858 MTPSSPGMSQQGGPG-MGPPMP 878
P P ++G PG GP P
Sbjct: 1110 QGPPGPA-GEKGAPGEKGPQGP 1130
Score = 87.8 bits (216), Expect = 1e-16
Identities = 237/975 (24%), Positives = 301/975 (30%), Gaps = 169/975 (17%)
Query: 58 QQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPG 117
Q+ Q Q QQ + + L G G PG + + G G PPG
Sbjct: 542 QESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPG 601
Query: 118 PPLLSKPG-------DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVP 170
P KPG D P P G R GL L ++ P G GP P
Sbjct: 602 P--AGKPGRRGRAGSDGARGMPGQTGPKGDR-GFDGLAGLPGEKGHRGDP-GPSGPPGPP 657
Query: 171 EFNNYYGS-------AAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD 223
+ G P GP G GP G PG+ M G G++
Sbjct: 658 GDDGERGDDGEVGPRGLPGEPGPRGLLGP-KGPPGPPGPPGVTGMD----GQPGPKGNVG 712
Query: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGG--GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
P G P Q N PGA G G G G G G G G G GA
Sbjct: 713 P--QGEPGPPGQQGN-------PGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGAD---- 759
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP----GGGGAASLSKAAA 337
G G G G G G P QG GP G G L
Sbjct: 760 --------GPPGHPGKEGPPGEKGGQG---PPGPQGPIGYPGPRGVKGADGIRGLKGTKG 808
Query: 338 GSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
GF F G G + + P P P+ P P P
Sbjct: 809 EKGEDGFPGFKGD----MGIKGDRGE-IGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGE 863
Query: 398 QAAAAGAAAGGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ 456
+ G+ G+ G G + + P + A +PG PGP R Q
Sbjct: 864 K---------GKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP---RGQ 911
Query: 457 GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ 516
P P + P+ G+ P + P GPPG +R P G QG P G +
Sbjct: 912 RGPTGPRGERGPR--GITGKPGPKGNSGGDGPA---GPPG-ERGPNGPQG--PTGFPGPK 963
Query: 517 YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQS 576
P D +P GQ+G +G+ QG+ + P PP +
Sbjct: 964 GPPGPPGKDG--------LPGHPGQRGETGF--QGK----TGPPGPPGV----------- 998
Query: 577 QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA 636
PQ + G P PG P + LP L+G A
Sbjct: 999 ---VGPQGPTGETGPMGERGHPGPPGPPGEQ-----------GLPGLAGKEGTKGDPGPA 1044
Query: 637 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGP 695
L G GD+ P P + L G P P P GSP + +G
Sbjct: 1045 GLPGKDGPPGLRGFPGDRGLP-----GPVGALGLKGNEGPPGPPGPAGSP--GERGPAGA 1097
Query: 696 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYG-PQQTGP 754
P IPG P PPG E + P E+G R+ G P GP
Sbjct: 1098 AGPIGIPGRPGPQGPPGPAGEKGA---------PGEKGPQGPAGRDGLQGPVGLPGPAGP 1148
Query: 755 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSGP 812
+ P G + G Q S G G Q GPQG +P PS + P
Sbjct: 1149 -VGPPGEDGDKGEIGEPG--QKGSKGDKGEQGPPGPTGPQGPIGQPG-----PSGADGEP 1200
Query: 813 GPGMGISANNQMHGQGP---SQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSP--GMSQ 867
GP Q +GP P G V L +P + + G++ M P P
Sbjct: 1201 GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGE-KGETGDVGQMGPPGPPGPRGP 1259
Query: 868 QGGPG----MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQ 923
G PG GPP N A +A G + G S P
Sbjct: 1260 SGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGP--- 1316
Query: 924 PMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL-ADMMSPGESKLPLPLKADGKEEGTPQP 982
+ ++ + PP P S VG D PGE P P DG G
Sbjct: 1317 --SGAAGPPGPKGPPGDDGP---KGSPGPVGFPGDPGPPGE---PGPAGQDG-PPGDKGD 1367
Query: 983 ESKSKKSSSSTTTGE 997
+ + ++ S TGE
Sbjct: 1368 DGEPGQTGSPGPTGE 1382
Score = 85.9 bits (211), Expect = 4e-16
Identities = 179/702 (25%), Positives = 215/702 (30%), Gaps = 132/702 (18%)
Query: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDA-------- 130
G +GG P GP E+ +G + G PPGPP L PG +
Sbjct: 934 GNSGGDGPA-GPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGP 992
Query: 131 --PPKMGEPAGGRYEHPGLGALGTQQPP-----VAVPG--------GGGGPAAVPEFNNY 175
PP + P G E +G G PP +PG G GPA +P
Sbjct: 993 PGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLP----- 1047
Query: 176 YGSAAPAS--GGPGGRAGP----CFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSH 229
G P G PG R P G + PG AG+PG P +
Sbjct: 1048 -GKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPG-------PPGPAGSPGERGPAGAAG 1099
Query: 230 E-GYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAA 288
G P PG P G G G G G G G G G A
Sbjct: 1100 PIGIPGR-----PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGE 1154
Query: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRF 347
G G G GS G P G +G PG GA G +
Sbjct: 1155 DGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGD 1214
Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
G P P Q L P P + G + PP P P+ + A GA G
Sbjct: 1215 EGPRGFPGPPGPVGLQGLPGP-PGEKGETGDVGQMG-----PPGPPGPRGPSGAPGAD-G 1267
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAM--SPGTPGPTMGRSQGSPMDPMVM 465
Q G+G + GA P A P + G PGP R + P
Sbjct: 1268 PQGPPGGIG---NPGAVGEKGEPGEAG-----EPGLPGEGGPPGPKGERGEKGESGPSGA 1319
Query: 466 KRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGD 525
P G P + SP P G G PGP P AG P D
Sbjct: 1320 AGPP--GPKGPPGDDGPKGSPGPVGFPGDPGPPGEP---------GPAGQDGPPGDKGDD 1368
Query: 526 ATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD 585
P Q G G +G P P P P Q + +
Sbjct: 1369 GE--------PGQTGSPGPTGEPGPSGPPGKRGPPGPAG--------PEGRQGEKGAKGE 1412
Query: 586 MSQEGYGTRSQP---PLAPGKPNHEDLNLI-----QQERPSS--------------LPDL 623
EG ++ P APGKP + L I +Q P S LP L
Sbjct: 1413 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL 1472
Query: 624 SGSIDDLPTGTEAT--LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP--SP 679
G D P G + L + G +GD+ P S + P GP P
Sbjct: 1473 KG--DSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPP 1530
Query: 680 SPVG-----SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE 716
P G P G+ S SGP P G PP PPG E
Sbjct: 1531 GPPGLPGPPGPKGAKGS-SGPTGPKGEAGHPGPPGPPGPPGE 1571
Score = 69.7 bits (169), Expect = 3e-11
Identities = 144/579 (24%), Positives = 182/579 (31%), Gaps = 81/579 (13%)
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG 135
+ N G G A PG E+ G A G+ P GPP P E AP + G
Sbjct: 1073 LKGNEGPPGPPGPAGSPG---ERGPAGAAGPIGIPGRPGPQGPP---GPAGEKGAPGEKG 1126
Query: 136 E--PAGGRYEHPGL-GALGTQQP--PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRA 190
PAG GL G +G P PV PG G + E GP G
Sbjct: 1127 PQGPAG----RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPT 1182
Query: 191 GPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHYPGYSRP 246
GP G PG + A G PG Q EG P +PG P
Sbjct: 1183 GP----QGPIGQPG-------PSGADGEPGPRGQQGLFGQKGDEG-PRG----FPGPPGP 1226
Query: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
G G G G +G G G G G + A A GG G G G
Sbjct: 1227 VGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGE 1286
Query: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366
G P G G GP G +G+A + + P G
Sbjct: 1287 PGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG---------- 1336
Query: 367 SPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG-MGLGKDMGAQY 425
SP P+ +P P P P Q GQ + G G G
Sbjct: 1337 SPGPV------GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPG 1390
Query: 426 AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPM-VMKRPQLYGMGSNPHSQPQQS 484
P A + R + G G + P+ P +P G+ P +Q
Sbjct: 1391 KRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG 1450
Query: 485 SPYPGGSYGPPGPQRYP--IGIQGRT--------PGAMAGMQYP-QQQDSGDATWKETFW 533
P G GPPGP P G++G + PG + + P +Q + GD
Sbjct: 1451 LPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQG 1510
Query: 534 LMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD--MSQEGY 591
P+ G+QG++G P P PP LP + +G
Sbjct: 1511 SSGPK-GEQGITG-------------PSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGE 1556
Query: 592 GTRSQPPLAPGKPNHEDLNL-IQQERPSSLPDLSGSIDD 629
PP PG P L IQ R D S +DD
Sbjct: 1557 AGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDD 1595
Score = 32.3 bits (72), Expect = 5.2
Identities = 47/213 (22%), Positives = 69/213 (32%), Gaps = 55/213 (25%)
Query: 1112 GDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGG 1171
G+T Q K PP P + GPQ P TG G PP P P Q P G
Sbjct: 982 GETGFQGKTGPPGPPG---VVGPQGP--TGETGPMGERGHPGPPGP---PGEQGLPGLAG 1033
Query: 1172 RSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVP 1231
+ T D + P ++ + +P +G + + N+ P P
Sbjct: 1034 KEGTKG------DPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGP-------P 1080
Query: 1232 GSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQ 1291
G P + G+ + P+GA +G+ PG+
Sbjct: 1081 GPPGPAGSPGE-----------RGPAGAAGPIGI-----------------------PGR 1106
Query: 1292 GPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP 1324
P G P G + + P DG+ GP
Sbjct: 1107 PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGP 1139
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 89.0 bits (219), Expect = 5e-17
Identities = 213/863 (24%), Positives = 252/863 (29%), Gaps = 183/863 (21%)
Query: 84 GAGGGAPQPGP-----DMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA 138
G G A PGP DM P GG K S+ G PPGPP + P G+PA
Sbjct: 710 GTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVG---PPGPPGSPGVNGQKGIP---GDPA 763
Query: 139 GGRYEHPG---LGALGTQQPPVAVPG--GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC 193
G PG L + + P PG G GPA +P F G P GR G
Sbjct: 764 FGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKG--------PKGREG-- 813
Query: 194 FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG 253
H G HS A G PG Q GYP S G +PG G G
Sbjct: 814 ---HAGFPGVPGPPGHSCERGAPGIPG-----QPGLPGYPGSP-GAPGGKGQPGDVGPPG 864
Query: 254 GGGGGG-----GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
G G G G G G G G G G G+ G G
Sbjct: 865 PAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFPGFPGERGKPG 924
Query: 309 VLSSPRQQGG----GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQL 364
P +G GM PG G A G Q P P +
Sbjct: 925 AEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPGDDG 984
Query: 365 LTSP-----SPMMRSYGGSYPEYSSPS------------APPPPPSQPQSQAAAAGAAAG 407
+P M+ G Y P PP PP P S
Sbjct: 985 FPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGST--------- 1035
Query: 408 GQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMK 466
G + G GL D G + P ++ P + G P G
Sbjct: 1036 GLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPASHFGP------------ 1083
Query: 467 RPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
P + + SP G +G G Q P GIQG P G P
Sbjct: 1084 ----------PGPKGEPGSPGCPGHFGASGEQGLP-GIQG--PRGSPGRPGPPGSSGPPG 1130
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDM 586
P +G G+ G QP P P L Q D
Sbjct: 1131 C--------PGDHGMPGLRG------QPGEMGDPGPRGL-----------------QGDP 1159
Query: 587 SQEGYGTRSQPPLAPGKPNHEDLN-LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSAS 645
G PP G LN L + SG D P G V
Sbjct: 1160 GIPG------PPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGP-------VGIP 1206
Query: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ 705
G +GD +P SP P PG P S P G+ I PG Q
Sbjct: 1207 GLKGERGDPGSPGISPPGPRGK---KGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQ 1263
Query: 706 MPPQP------PGSQSESSSHPALSQSP-------------MPQERGFMAGTQRNPQMAQ 746
PP P PG S L P P G+ + + Q
Sbjct: 1264 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ 1323
Query: 747 YGPQQTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVP 805
GP PH PG G+ + +G GP+ + GP + P G+P
Sbjct: 1324 KGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPR-GEPGPPADVDDCPRIPGLP 1382
Query: 806 SA-SYSGPGPGMGISANNQMHGQGPSQP-CGAVP--LGRMPSAGMQNRPFPGNMSSMT-- 859
A GP MG+ +GPS P C P GR G+ P P T
Sbjct: 1383 GAPGMRGPEGAMGLPGM-----RGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGE 1437
Query: 860 ------PSSPGMSQQGGP-GMGP 875
P PG GP G GP
Sbjct: 1438 DGYPGGPGPPGPIGDPGPKGFGP 1460
Score = 79.3 bits (194), Expect = 4e-14
Identities = 203/809 (25%), Positives = 264/809 (32%), Gaps = 153/809 (18%)
Query: 137 PAGGR-----YEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAG 191
P GGR + P G+ G PP P G GP P GP G +G
Sbjct: 46 PCGGRDCSVCHCVPEKGSRGPPGPPG--PQGPIGPLGAP--------------GPIGLSG 89
Query: 192 PCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251
G + PG AAG G P G+P + PG+ P G
Sbjct: 90 EK-GMRGDRGPPG----------AAGDKGDKGP--TGVPGFPG--LDGIPGHPGPPGPRG 134
Query: 252 GGGGGGGGGGSGGGGGGGGAGAGGAGA-----------GAVAAAAAAAAAAAGGGGGGGY 300
G G G G G GG GA G G G A G G G
Sbjct: 135 KPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGL 194
Query: 301 GG--SSAGYGVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG 356
G S G G + P G G++ PG G L K G G G+
Sbjct: 195 PGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGL-KGNPGVGVKGQMGDPGEVGQQGS 253
Query: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM- 415
PT LL P P Y G P P P + +G A G++ G
Sbjct: 254 PGPT---LLVEP-PDFCLYKGEKGIKGIPGMVGLP--GPPGRKGESGIGAKGEKGIPGFP 307
Query: 416 GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR----SQGSPMDPMVMKRPQLY 471
G D G+ SP + + PG G + ++G P P V+ P L
Sbjct: 308 GPRGDPGSY---GSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPL- 363
Query: 472 GMGSNPHSQPQQSSPYPG-----GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
P P +PG G GPPGP G+ GR A AGM P
Sbjct: 364 -----PLKGPPGDPGFPGRYGETGDVGPPGPP----GLLGRPGEACAGMIGP-------- 406
Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
+ F +P G+ G+ G + P +P P LP P Q LP S Y
Sbjct: 407 PGPQGFPGLPGLPGEAGIPG--RPDSAPGKPGKPGSPGLPGAPGLQGLPG-SSVIYCSVG 463
Query: 585 DMSQEGYGTRSQPPLA---PGKPNHEDLNLIQ-----QERPSSLPDLSGSIDDLPTGTEA 636
+ +G + PP G+ +E L + P LP GS DL
Sbjct: 464 NPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDL------ 517
Query: 637 TLSSAVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPG--GPSPSPVGSPVGSNQSRS 693
G ++GD P A+ P S PG G V S V ++
Sbjct: 518 ------GLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGER 571
Query: 694 GPISPASIP------------GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRN 741
GP P P G + P PPG +++ P P P AG
Sbjct: 572 GPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDAT--PGGKGFPGPLGPPGKAGPVGP 629
Query: 742 PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 801
P + GP P HP G H G+ G G +S PP +
Sbjct: 630 PGLGFPGP----PGERGHPGVPG--HPGVRG--PDGLKGQKGDTISCNVTYPGRHGPPGF 681
Query: 802 SGVPS-ASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSM-- 858
G P + GP G+S ++ G+ + +P M + F G S
Sbjct: 682 DGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPV 741
Query: 859 ----TPSSPGMS-QQGGPG------MGPP 876
P SPG++ Q+G PG +GPP
Sbjct: 742 GPPGPPGSPGVNGQKGIPGDPAFGHLGPP 770
Score = 67.8 bits (164), Expect = 1e-10
Identities = 253/1039 (24%), Positives = 313/1039 (30%), Gaps = 203/1039 (19%)
Query: 84 GAGGGAPQPG-PDMEQPQHGGAK----DSAAGGQADPPGPPLLSKPGD---------EDD 129
G G QPG P ++ G K D GQ PGP LL +P D
Sbjct: 217 GLVGPPGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKG 276
Query: 130 APPKMGEPA-GGRYEHPGLGALGTQQPPVAVPGGGGGPAAV--PEFNNYYGSAAPASGGP 186
P +G P GR G+GA G + P PG G P + P F G G P
Sbjct: 277 IPGMVGLPGPPGRKGESGIGAKGEKGIP-GFPGPRGDPGSYGSPGFPGLKGELG-LVGDP 334
Query: 187 G--GRAGPCFDQHGGQQSPG-MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN----H 239
G G GP D G + PG G++ + G PG DP G+P
Sbjct: 335 GLFGLIGPKGDP-GNRGHPGPPGVLVTPPLPLKGPPG--DP------GFPGRYGETGDVG 385
Query: 240 YPG----YSRPG-AGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
PG RPG A G G G G G G G AG G A + G
Sbjct: 386 PPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPG 445
Query: 295 GGG-GGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA------------ 341
G G GSS Y + +P QG +GP GG K G A
Sbjct: 446 APGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPP 505
Query: 342 --GGFQRFAGQ-----------NQHPSGA--TPTLNQLLTSPSP---------MMRSYGG 377
G Q G + P GA P L + P M+ S
Sbjct: 506 GLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVK 565
Query: 378 SYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQ 437
+ P PP P QP S A G G G + P
Sbjct: 566 GHKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGK---GFPGPLGPPG 622
Query: 438 RSHPAMSPGT--PGPTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG----- 489
++ P PG PGP R G P P V L G + S + YPG
Sbjct: 623 KAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTIS---CNVTYPGRHGPP 679
Query: 490 GSYGPPGPQRYPIGIQGR-----------TPGAMAGMQYP-------QQQDSGDATWKET 531
G GPPGP+ +P G QG PG + P D G K +
Sbjct: 680 GFDGPPGPKGFP-GPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGS 738
Query: 532 FWLMPP-QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDM 586
+ PP G GV+G Q P HL P + +P R P
Sbjct: 739 SPVGPPGPPGSPGVNG------QKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPG 792
Query: 587 SQ--------------EGYGTRSQPPLAPGKPNHEDLNLIQQERPS-----SLPDLSGSI 627
++ +G + P PG P H ++ P LP GS
Sbjct: 793 AEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPGHS----CERGAPGIPGQPGLPGYPGS- 847
Query: 628 DDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVG 687
P G V G +G P + H P L IPG + P G
Sbjct: 848 PGAPGGKGQ--PGDVGPPGPAGMKGLPGLPGRP--GAHGPPGLPGIPGPFGDDGLPGPPG 903
Query: 688 SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQY 747
R P P PG + P G S +P +RG +
Sbjct: 904 PKGPRGLPGFP-GFPGERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRGA---KGAIGPP 959
Query: 748 GPQQTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPS 806
G + +S +PG G F + GT G Q + G G Y P + G P
Sbjct: 960 GDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQ-GRRGEPGRYGPPGFHRGEPG 1018
Query: 807 ASYSGPGPGMGISANNQMHGQGPSQPCGAVPL-------GRMPSAGMQNRPFPGNMSSMT 859
PGP GP P G+ L G G P P S +
Sbjct: 1019 EK-GQPGP------------PGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGID 1065
Query: 860 PSSPGMSQQGGPG--MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS 917
+ +G P GPP P K + + G F + GL
Sbjct: 1066 GARGPKGNKGDPASHFGPPGP----KGEPGSPGC-----------PGHFGASGEQGLPGI 1110
Query: 918 SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEE 977
P P PP S P GL PGE P P G +
Sbjct: 1111 QGPRGSP--------GRPGPPGSSGPPGCPGDHGMPGLRG--QPGEMGDPGPRGLQG-DP 1159
Query: 978 GTPQPESKSKKSSSSTTTG 996
G P P S S G
Sbjct: 1160 GIPGPPGIKGPSGSPGLNG 1178
Score = 53.9 bits (128), Expect = 2e-06
Identities = 67/219 (30%), Positives = 74/219 (33%), Gaps = 25/219 (11%)
Query: 84 GAGGGAPQPGPDMEQP-QHGGAKDSAAGGQADPPGPP-----LLSKPGDED-DAPPKMGE 136
GA G AP+ PD P G G PPG P L +PGD PP
Sbjct: 1245 GATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPG 1304
Query: 137 PAG--GRYEHPGLGALGTQQPPVAVPGGGG-----GPAAVPEFNNYYGSAAPAS-GGPGG 188
P G G PG Q+ PV PG G GP G P GP G
Sbjct: 1305 PPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRG 1364
Query: 189 RAGPCFDQHGGQQSPGM----GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ----CNHY 240
GP D + PG+ GM A G PG P +G P +
Sbjct: 1365 EPGPPADVDDCPRIPGLPGAPGMR--GPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGV 1422
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
PG P G G G GG G G G G G G G
Sbjct: 1423 PGSPGPPGRKGDTGEDGYPGGPGPPGPIGDPGPKGFGPG 1461
Score = 39.7 bits (91), Expect = 0.033
Identities = 114/495 (23%), Positives = 148/495 (29%), Gaps = 98/495 (19%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED--------DAPPKMG 135
G G +PG H G + GQ PPGPP PG P G
Sbjct: 996 GMQGRRGEPGRYGPPGFHRG--EPGEKGQPGPPGPP--GPPGSTGLRGFIGFPGLPGDQG 1051
Query: 136 EPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC-F 194
EP G PG + + P G G PA+ ++G P G PG P F
Sbjct: 1052 EP--GSPGPPGFSGIDGARGP---KGNKGDPAS------HFGPPGP-KGEPGSPGCPGHF 1099
Query: 195 DQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNH-YPGY-SRPGAGGGG 252
G Q PG+ G+PG P +S G P +H PG +PG G
Sbjct: 1100 GASGEQGLPGI-------QGPRGSPGRPGPPGSS--GPPGCPGDHGMPGLRGQPGEMGDP 1150
Query: 253 GGGG--GGGGGSGGGGGGGGAGAGGAGA-----GAVAAAAAAAAAAAGGGGGGGYGGSSA 305
G G G G G G G +G+ G G A+ G G G G
Sbjct: 1151 GPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKG 1210
Query: 306 GYGVLSSP--RQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQ 363
G SP G GP G +S AG+ + P +
Sbjct: 1211 ERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDG 1270
Query: 364 LLTSPSP--------MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM 415
+P P ++R G P PP PP P + GQ+ G
Sbjct: 1271 PRGAPGPPGLPGSVDLLRGEPGDCG-LPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGF 1329
Query: 416 ----------------------------GLGKDMGAQYAAAS-------PAWAAAQQRSH 440
GL G A P A
Sbjct: 1330 PGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRG 1389
Query: 441 PAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSS---------PYPGGS 491
P + G PG G +P + R + G+ +P ++ P P G
Sbjct: 1390 PEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGPPGP 1449
Query: 492 YGPPGPQRYPIGIQG 506
G PGP+ + G G
Sbjct: 1450 IGDPGPKGFGPGYLG 1464
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 89.0 bits (219), Expect = 5e-17
Identities = 241/920 (26%), Positives = 291/920 (31%), Gaps = 185/920 (20%)
Query: 80 NSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAG 139
+ + G G PGP E G D PPG P PG A P G P
Sbjct: 568 DGIPGTPGVKGLPGPKGELALSGEKGDQG------PPGDP--GSPGSPGPAGPA-GPPGY 618
Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPA-AVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
G PGL GTQ VPG G P A P + P GP G G H
Sbjct: 619 GPQGEPGLQ--GTQ----GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPG-----HP 667
Query: 199 GQQSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGG 254
G Q P G PGS+ DP +G P +PG P G G
Sbjct: 668 GPQGP------------PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPG 715
Query: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPR 314
G G G G G G G GA A A G G G G+S +G + P
Sbjct: 716 TKGSLGCPGKMGEPGLPGKPGL-PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPG 774
Query: 315 QQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-QHPSGAT--PTLNQLLTS---- 367
G + PG G G Q G+ + P GA P LN L
Sbjct: 775 LPG--LPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRR 832
Query: 368 --------PSPMMRSYGGSYPEYSSPSAPPPPPSQ-PQSQAAAAG----AAAGGQQAAAG 414
P G E SP P P Q G G+ G
Sbjct: 833 GKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIG 892
Query: 415 MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG-------PTMGRSQGSPMDPMVMK- 466
M MG A P SPG PG P QG +P +
Sbjct: 893 M-----MGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEI 947
Query: 467 --------RPQLYGMGSNPHSQPQQSSP-YPG--------GSYGPPGPQRYPIGIQGRT- 508
P L G NP + + P PG G GPPGP R +G G
Sbjct: 948 SHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGP-RGDLGSTGNPG 1006
Query: 509 -------PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSG-YCQQGQ--QPYYSQ 558
PG+M M P + K P + G+ G+ G + QG +P YS+
Sbjct: 1007 EPGLRGIPGSMGNMGMPGSKG------KRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSE 1060
Query: 559 QPQP-PHLPPQAQYLPSQSQQRYQPQQD--------MSQEGYGTRSQPPLAPGKPN-HED 608
+P P P LP ++ + Q EG P PGKP H D
Sbjct: 1061 GTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGD 1120
Query: 609 LNLIQQER---------PSSLPDLSGSIDDLPTGTEAT-----LSSAVSASGST----SS 650
L + P LP GS P G + G T +
Sbjct: 1121 LGFKGIKGLLGPPGIRGPPGLPGFPGSPG--PMGIRGDQGRDGIPGPAGEKGETGLLRAP 1178
Query: 651 QGDQSNP-AQSPFSPHASPHLSSIPG-----------GPS-----PSPVGSP---VGSNQ 690
G + NP AQ +P +PG GP+ P P G P +
Sbjct: 1179 PGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQT 1238
Query: 691 SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS-PMPQERGFMAGTQRNPQMAQYGP 749
GP PG+ PP PPGS S P P+ AG P + G
Sbjct: 1239 GNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPP--GRLGA 1296
Query: 750 QQTGPSMSPHPSPGGQMHAGISSFQQSNSS--GTYGPQMSQYGPQGNYSRPPAYSGVPSA 807
T P PG Q G+ ++ N G+ GP GP+G PP G P
Sbjct: 1297 PGTPGLPGPRGDPGFQGFPGVKG-EKGNPGFLGSIGPP-GPIGPKG----PPGVRGDPGT 1350
Query: 808 ----SYSG-PGPGMGISANNQMHGQ-GPSQPCGAV----PLGRMPSAGMQNRPFP----G 853
S G PGP G M G+ GP P G + P G+ G P P G
Sbjct: 1351 LKIISLPGSPGP-PGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKG 1409
Query: 854 NMSSMTPSSPGMSQQGGPGM 873
N S P S G PG+
Sbjct: 1410 NKGSKGEPGPAGS-DGLPGL 1428
Score = 75.1 bits (183), Expect = 7e-13
Identities = 162/681 (23%), Positives = 207/681 (30%), Gaps = 144/681 (21%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK--MGE 136
N L G G QPGP EQ G + G Q P L + G PK G
Sbjct: 784 NEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843
Query: 137 PAGGRYEHPG-------------LGALGTQ----QPPVAVPGGGGGPAAVPEFNNYYGSA 179
P R PG +G LG + P + P G G + F G
Sbjct: 844 PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPP 903
Query: 180 APAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN-SQ 236
P G PG R P GQ+ G PG+ + +G P S+
Sbjct: 904 GPPGNPGTPGQRGSPGIPGVKGQR---------------GTPGAKG--EQGDKGNPGPSE 946
Query: 237 CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
+H G G G G G G G G G G A + G G
Sbjct: 947 ISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPG 1006
Query: 297 GGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS 355
G G G + P +G +G PG G L G Q G+ +
Sbjct: 1007 EPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL------PGIHGLQGDKGEPGYSE 1060
Query: 356 GATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG- 414
G P PP P P GQ G
Sbjct: 1061 GTRP---------------------------GPPGPTGDPGLPGDMGKKGEMGQPGPPGH 1093
Query: 415 MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP--TMGRS--QGSPMDPMVMKRPQL 470
+G GA + SP PG PGP +G +G P + P L
Sbjct: 1094 LGPAGPEGAPGSPGSPG------------LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGL 1141
Query: 471 YGMGSNP------HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG 524
G +P Q + P P G G G R P G +G PGA + D G
Sbjct: 1142 PGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG-NPGAQGA-----KGDRG 1195
Query: 525 DATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ 584
+ P G++G G P PP LP +P Q+ R P
Sbjct: 1196 APGF-------PGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP--GAIIPGQTGNRGPP-- 1244
Query: 585 DMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS--S 640
G+R P P PG P + + + P G P GT +
Sbjct: 1245 -------GSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKG-----PPGTAGDMGPPG 1292
Query: 641 AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-------PSPVGSPVGSNQSRS 693
+ A G+ G + +P F P + G P P P+G P G R
Sbjct: 1293 RLGAPGTPGLPGPRGDPGFQGF-----PGVKGEKGNPGFLGSIGPPGPIG-PKGPPGVRG 1346
Query: 694 GP--ISPASIPGSQMPPQPPG 712
P + S+PGS PP PG
Sbjct: 1347 DPGTLKIISLPGSPGPPGTPG 1367
Score = 72.8 bits (177), Expect = 4e-12
Identities = 217/911 (23%), Positives = 283/911 (31%), Gaps = 207/911 (22%)
Query: 106 DSAAG--GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGG 163
D A G G+ PGPP PG + P+ G PGL P + G
Sbjct: 42 DGAKGEKGEKGFPGPP--GSPGQKGFTGPEGLPGPQGPKGFPGL-------PGLTGSKGV 92
Query: 164 GGPAAVPEFNNYYG-SAAPASGGPGGRAGP--CFDQHGGQQSPGM-------GMMHSASA 213
G + +P F+ G P + GP G G C G Q PG+ G+ +A
Sbjct: 93 RGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGL 152
Query: 214 AAA-GAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
GAP + ++ +G P PG P G G G G G G G G
Sbjct: 153 KGQKGAPAKEEDIELDAKGDPG-----LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPG 207
Query: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV----LSSPRQQGG--------GM 320
A G G G G G G G L+ P + G
Sbjct: 208 AMGP-RGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGA 266
Query: 321 MMGPGGGGAASLSKAAAGSAAG-----GFQRFAGQNQHPS-----------------GAT 358
M PG G + L + GS G G Q G++ P G
Sbjct: 267 MGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGED 326
Query: 359 PTLNQLLTSPSPMMRS---YGGSYPEYSSPSAPPPP----------PSQPQSQAAAAGAA 405
Q P R Y +Y E P PP PS P + G++
Sbjct: 327 GIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSS 386
Query: 406 AGGQQAAAGM-GL----------GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR 454
G + A G GL GKD A SP A + PG PG + R
Sbjct: 387 RPGLRGAPGWPGLKGSKGERGRPGKD--AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFR 444
Query: 455 SQGSPMD---PMVMKRPQLYGMGSNPHSQPQ---QSSPYPGGSYGPPGPQRYPIGIQGRT 508
+G P D P + P + G+ P +P PY G G PG
Sbjct: 445 -KGPPGDHGLPGYLGSPGIPGV-DGPKGEPGLLCTQCPYIPGPPGLPG-----------L 491
Query: 509 PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQ 568
PG P G+QG +G P + P P P
Sbjct: 492 PGLHGVKGIP---------------------GRQGAAGLKGSPGSPGNTGLPGFPGFPG- 529
Query: 569 AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSID 628
AQ P ++ + Q Q G P L G+P + L+ I + L G
Sbjct: 530 AQGDPGLKGEKGETLQPEGQ--VGVPGDPGLR-GQPGRKGLDGIPGT--PGVKGLPGPKG 584
Query: 629 DLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS---IPGGPSP------ 679
+L E GS S G + P P L +PG P P
Sbjct: 585 ELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGP 644
Query: 680 -------SPVGSPVG--SNQSRSGPISPASIPGS-----------------------QMP 707
+PV P G GP P IPGS P
Sbjct: 645 RGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGP 704
Query: 708 PQP------PGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS 761
P P PG++ + + +P + G + G + P +A G GP P
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPG-LPGAKGEPAVAMPG----GPGTPGFPG 759
Query: 762 PGGQM--HAGISSFQQSNSSGTYGPQMSQYGPQGNYSR--PPAYSGVPSASYSGPGPGMG 817
G H I GT G + GP+G+ + PP G P GP G
Sbjct: 760 ERGNSGEHGEIGLPGLPGLPGTPGNE-GLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQG 818
Query: 818 ISANNQMHGQ-------GPSQPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQG 869
+ N + GQ GP G L R G P PG+ M P + Q+G
Sbjct: 819 LPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGP----LGQRG 874
Query: 870 GPG----MGPP 876
PG +GPP
Sbjct: 875 YPGNPGILGPP 885
Score = 70.9 bits (172), Expect = 1e-11
Identities = 202/860 (23%), Positives = 267/860 (31%), Gaps = 174/860 (20%)
Query: 88 GAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-------------LLSKPGDEDDAPPK- 133
GAP D+E G A G PGPP PG PK
Sbjct: 157 GAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKG 216
Query: 134 -MGEPAGGRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYG-SAAPASGGPGGRA 190
MGE G G+ G G PP V GP + G A GP G +
Sbjct: 217 HMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPS 276
Query: 191 GPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM-DPLQNSHEGYPNSQ----CNHYPG-YS 244
G + +G ++ A G PG P ++ G+P S+ +PG
Sbjct: 277 GLPGESYGSEK------------GAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMG 324
Query: 245 RPGAGGGGGGGGGGG--------------GGSGGGGGGGGAGAGG--AGAGAVAAAAAAA 288
G G G G G G G G G GA G +G +
Sbjct: 325 EDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPG 384
Query: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
++ G G G+ G G P + G PG G+ L + G F
Sbjct: 385 SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVF- 443
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAP--PPPPSQPQSQAAAAGAAA 406
+ P G L + P + G P P P PP P
Sbjct: 444 --RKGPPGDHGLPGYLGSPGIPGVDGPKGE-PGLLCTQCPYIPGPPGLPGLPGLHGVKGI 500
Query: 407 GGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM--GRSQGSPMDPM 463
G+Q AAG+ G G P + AQ P + G G T+ G P DP
Sbjct: 501 PGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQ--GDPGLK-GEKGETLQPEGQVGVPGDPG 557
Query: 464 VMKRPQLYGMGSNPHSQPQQSSPYP---------GGSYGPPGPQRYPIGIQGRTPGAMAG 514
+ +P G+ P + + P P G GPPG P G G P AG
Sbjct: 558 LRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSP-GSPG--PAGPAG 614
Query: 515 MQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPS 574
PP YG QG G QG Q P A P
Sbjct: 615 ---------------------PPGYGPQGEPGL--QGTQGV-----------PGAPGPPG 640
Query: 575 QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDD--LPT 632
++ R + G PP PG P H + P +P G D LP
Sbjct: 641 EAGPRGELSVSTPVPG------PPGPPGPPGHPG-----PQGPPGIPGSLGKCGDPGLPG 689
Query: 633 GTEATLSSAVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQ 690
+ G +GDQ P + +PG P P G P
Sbjct: 690 PDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPA---- 745
Query: 691 SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQM--AQYG 748
++PG P PG + S H + +P + GT N + +
Sbjct: 746 --------VAMPGGPGTPGFPGERGNSGEHGEIGLPGLPG----LPGTPGNEGLDGPRGD 793
Query: 749 PQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPS 806
P Q GP P PG + + +G G Q + GP+G+ P G+
Sbjct: 794 PGQPGPPGEQGP-PGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD----PGIPGLDR 848
Query: 807 ASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPG-- 864
+ + G GI + QG P G R +PGN + P PG
Sbjct: 849 SGFPGETGSPGIPGH-----QGEMGPLG-------------QRGYPGNPGILGP--PGED 888
Query: 865 --MSQQGGPG-MGPPMPTVN 881
+ G PG +GPP P N
Sbjct: 889 GVIGMMGFPGAIGPPGPPGN 908
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,549,811
Number of Sequences: 37866
Number of extensions: 7807629
Number of successful extensions: 157798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 2226
Number of HSP's that attempted gapping in prelim test: 51110
Number of HSP's gapped (non-prelim): 51652
length of query: 2191
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2073
effective length of database: 13,779,330
effective search space: 28564551090
effective search space used: 28564551090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.