Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38569394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38569394 inhibitor of kappa light polypeptide gene enhancer
in B-cells, kinase complex-associated protein [Homo sapiens]
(1332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38569394 inhibitor of kappa light polypeptide gene enhancer i... 2687 0.0
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 38 0.057
gi|46409657 WD repeat domain 56 [Homo sapiens] 36 0.28
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 35 0.63
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 35 0.63
gi|221219020 NYD-SP11 protein [Homo sapiens] 34 1.1
gi|8922764 MRG-binding protein [Homo sapiens] 34 1.1
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 33 1.4
gi|55743151 WD repeat domain 19 [Homo sapiens] 33 1.4
gi|4506341 ATP-binding cassette, sub-family D, member 3 isoform ... 33 1.8
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 33 2.4
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 33 2.4
gi|146219841 PNMA-like 2 [Homo sapiens] 33 2.4
gi|15208660 tripartite motif protein 21 [Homo sapiens] 32 3.1
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 32 3.1
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 32 3.1
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 32 3.1
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 32 3.1
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 32 3.1
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 32 3.1
gi|83716024 kinesin family member 21B [Homo sapiens] 32 3.1
gi|73695475 protein BAP28 [Homo sapiens] 32 3.1
gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Hom... 32 4.1
gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [H... 32 4.1
gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [H... 32 4.1
gi|93277096 limbin [Homo sapiens] 32 4.1
gi|157389009 hypothetical protein LOC144608 [Homo sapiens] 32 4.1
gi|157388975 coiled-coil domain containing 99 [Homo sapiens] 32 4.1
gi|105990532 apolipoprotein B precursor [Homo sapiens] 32 5.3
gi|221316624 dystonin isoform 4 [Homo sapiens] 32 5.3
>gi|38569394 inhibitor of kappa light polypeptide gene enhancer in
B-cells, kinase complex-associated protein [Homo sapiens]
Length = 1332
Score = 2687 bits (6966), Expect = 0.0
Identities = 1332/1332 (100%), Positives = 1332/1332 (100%)
Query: 1 MRNLKLFRTLEFRDIQGPGNPQCFSLRTEQGTVLIGSEHGLIEVDPVSREVKNEVSLVAE 60
MRNLKLFRTLEFRDIQGPGNPQCFSLRTEQGTVLIGSEHGLIEVDPVSREVKNEVSLVAE
Sbjct: 1 MRNLKLFRTLEFRDIQGPGNPQCFSLRTEQGTVLIGSEHGLIEVDPVSREVKNEVSLVAE 60
Query: 61 GFLPEDGSGRIVGVQDLLDQESVCVATASGDVILCSLSTQQLECVGSVASGISVMSWSPD 120
GFLPEDGSGRIVGVQDLLDQESVCVATASGDVILCSLSTQQLECVGSVASGISVMSWSPD
Sbjct: 61 GFLPEDGSGRIVGVQDLLDQESVCVATASGDVILCSLSTQQLECVGSVASGISVMSWSPD 120
Query: 121 QELVLLATGQQTLIMMTKDFEPILEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF 180
QELVLLATGQQTLIMMTKDFEPILEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF
Sbjct: 121 QELVLLATGQQTLIMMTKDFEPILEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF 180
Query: 181 QMQMHESALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL 240
QMQMHESALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
Sbjct: 181 QMQMHESALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL 240
Query: 241 GPALAWKPSGSLIASTQDKPNQQDIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNADSSV 300
GPALAWKPSGSLIASTQDKPNQQDIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNADSSV
Sbjct: 241 GPALAWKPSGSLIASTQDKPNQQDIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNADSSV 300
Query: 301 LAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTPYRLH 360
LAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTPYRLH
Sbjct: 301 LAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTPYRLH 360
Query: 361 VLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLF 420
VLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLF
Sbjct: 361 VLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLF 420
Query: 421 PHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSADPTVKLGAVGGSGFKVCLRTP 480
PHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSADPTVKLGAVGGSGFKVCLRTP
Sbjct: 421 PHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSADPTVKLGAVGGSGFKVCLRTP 480
Query: 481 HLEKRYKIQFENNEDQDVNPLKLGLLTWIEEDVFLAVSHSEFSPRSVIHHLTAASSEMDE 540
HLEKRYKIQFENNEDQDVNPLKLGLLTWIEEDVFLAVSHSEFSPRSVIHHLTAASSEMDE
Sbjct: 481 HLEKRYKIQFENNEDQDVNPLKLGLLTWIEEDVFLAVSHSEFSPRSVIHHLTAASSEMDE 540
Query: 541 EHGQLNVSSSAAVDGVIISLCCNSKTKSVVLQLADGQIFKYLWESPSLAIKPWKNSGGFP 600
EHGQLNVSSSAAVDGVIISLCCNSKTKSVVLQLADGQIFKYLWESPSLAIKPWKNSGGFP
Sbjct: 541 EHGQLNVSSSAAVDGVIISLCCNSKTKSVVLQLADGQIFKYLWESPSLAIKPWKNSGGFP 600
Query: 601 VRFPYPCTQTELAMIGEEECVLGLTDRCRFFINDIEVASNITSFAVYDEFLLLTTHSHTC 660
VRFPYPCTQTELAMIGEEECVLGLTDRCRFFINDIEVASNITSFAVYDEFLLLTTHSHTC
Sbjct: 601 VRFPYPCTQTELAMIGEEECVLGLTDRCRFFINDIEVASNITSFAVYDEFLLLTTHSHTC 660
Query: 661 QCFCLRDASFKTLQAGLSSNHVSHGEVLRKVERGSRIVTVVPQDTKLVLQMPRGNLEVVH 720
QCFCLRDASFKTLQAGLSSNHVSHGEVLRKVERGSRIVTVVPQDTKLVLQMPRGNLEVVH
Sbjct: 661 QCFCLRDASFKTLQAGLSSNHVSHGEVLRKVERGSRIVTVVPQDTKLVLQMPRGNLEVVH 720
Query: 721 HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHI 780
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHI
Sbjct: 721 HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHI 780
Query: 781 NLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMRAVMESINPHKYCLSIL 840
NLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMRAVMESINPHKYCLSIL
Sbjct: 781 NLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMRAVMESINPHKYCLSIL 840
Query: 841 TSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDF 900
TSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDF
Sbjct: 841 TSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDF 900
Query: 901 DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPE 960
DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPE
Sbjct: 901 DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPE 960
Query: 961 CLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALS 1020
CLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALS
Sbjct: 961 CLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALS 1020
Query: 1021 AFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAV 1080
AFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAV
Sbjct: 1021 AFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAV 1080
Query: 1081 LLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLV 1140
LLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLV
Sbjct: 1081 LLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLV 1140
Query: 1141 VRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA 1200
VRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA
Sbjct: 1141 VRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA 1200
Query: 1201 ERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFE 1260
ERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFE
Sbjct: 1201 ERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFE 1260
Query: 1261 DTLQLMERSLPEIWTLTYQQNSATPVLGPNSTANSIMASYQQQKTSVPVLDAELFIPPKI 1320
DTLQLMERSLPEIWTLTYQQNSATPVLGPNSTANSIMASYQQQKTSVPVLDAELFIPPKI
Sbjct: 1261 DTLQLMERSLPEIWTLTYQQNSATPVLGPNSTANSIMASYQQQKTSVPVLDAELFIPPKI 1320
Query: 1321 NRRTQWKLSLLD 1332
NRRTQWKLSLLD
Sbjct: 1321 NRRTQWKLSLLD 1332
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 38.1 bits (87), Expect = 0.057
Identities = 88/435 (20%), Positives = 162/435 (37%), Gaps = 85/435 (19%)
Query: 843 HVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEA-LKYLLHLVDVNELYDHSLGTYDFD 901
+++K ELE LQ+ HE+ + +SA EA L+ L+L D
Sbjct: 672 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAELEARLNLRD--------------- 716
Query: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIG------HLSKCGP 955
AE +Q KE L + L ++E + + ++K + + A+G +
Sbjct: 717 -----AEANQL--KEELEKVTRLTQLEQSALQAELEKERQALKNALGKAQFSEEKEQENS 769
Query: 956 EYFPECLNLIKDKNLYNEALKLYSPSSQQYQD------------------ISIAYGEHLM 997
E + +L D NL + LK + D + + GE
Sbjct: 770 ELHAKLKHLQDDNNLLKQQLKDFQNHLNHVVDGLVRPEEVAARVDELRRKLKLGTGE--- 826
Query: 998 QEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLV 1057
+++ P+ ++ +K S L W+ +D+ R L ++
Sbjct: 827 -MNIHSPSDVLGKSLADLQKQFSEILARSKWE------------RDEAQVRERKLQEEMA 873
Query: 1058 EQRKHIDAAMVLEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQ 1117
Q++ + A EE Q E A+ + + R+ N + ++ N+K +
Sbjct: 874 LQQEKL--ATGQEEFRQACERALEARMNFDKRQHEARIQQMENEIHYLQENLK-----SM 926
Query: 1118 KNYMAFLDSQTATFSRHKKRLLV-VREL---------KEQAQQAGLDDEVPHGQESDLFS 1167
+ D Q K+R+L +REL K Q Q GLD E+ +++ S
Sbjct: 927 EEIQGLTDLQLQEADEEKERILAQLRELEKKKKLEDAKSQEQVFGLDKELKKLKKAVATS 986
Query: 1168 E---TSSVVSGSEMSGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLALLEALSE 1224
+ T+ + + + +I+ ++ ++AER S K DL EA E
Sbjct: 987 DKLATAELTIAKDQLKSLHGTVMKINQERAEELQEAER--FSRKAAQAARDLTRAEAEIE 1044
Query: 1225 VVQNTENLKDEVYHI 1239
++QN K E + +
Sbjct: 1045 LLQNLLRQKGEQFRL 1059
>gi|46409657 WD repeat domain 56 [Homo sapiens]
Length = 777
Score = 35.8 bits (81), Expect = 0.28
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 29/151 (19%)
Query: 115 MSWSPDQELVLLATGQQTLIMMTKDFEPILEQQIHQD-----DFGESKFITVGWGRK-ET 168
++W PD E VL G+Q +I + +L+ + H D+ + + G +
Sbjct: 153 VAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGEDCKY 212
Query: 169 QFHGSEGRQAAFQMQMHESALPWDDHRPQVTWRGDGQFFAVSV-----VCPETGARKVRV 223
+ S GR + Q HE + V W DG+ FAV +C +TG
Sbjct: 213 KVWDSYGR-PLYNSQPHEHPI------TSVAWAPDGELFAVGSFHTLRLCDKTG------ 259
Query: 224 WNREFALQSTSEPVAGLGPALAWKPSGSLIA 254
W+ +AL+ +P G +AW G+ IA
Sbjct: 260 WS--YALE---KPNTGSIFNIAWSIDGTQIA 285
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 34.7 bits (78), Expect = 0.63
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1140 VVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRK 1199
V + K Q + D+VP + SE +SV S E K + S ISA+S+ + K
Sbjct: 1315 VSNQFKHQFVMSRHHDKVPGTISYE--SEITSVNSFPEKCSKQENIASGISAKSASDNSK 1372
Query: 1200 AER-----KKHSLKEGSPLEDLALLEALSE 1224
AE + SLKE SP +D +++ LSE
Sbjct: 1373 AEETQGNVDEASLKESSPSDD-SIISPLSE 1401
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 34.7 bits (78), Expect = 0.63
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1140 VVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRK 1199
V + K Q + D+VP + SE +SV S E K + S ISA+S+ + K
Sbjct: 1159 VSNQFKHQFVMSRHHDKVPGTISYE--SEITSVNSFPEKCSKQENIASGISAKSASDNSK 1216
Query: 1200 AER-----KKHSLKEGSPLEDLALLEALSE 1224
AE + SLKE SP +D +++ LSE
Sbjct: 1217 AEETQGNVDEASLKESSPSDD-SIISPLSE 1245
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 33.9 bits (76), Expect = 1.1
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 14/170 (8%)
Query: 1103 DIIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGLD-------D 1155
D++ KP ++ + T RHK+ V+ +EQAQ+ D
Sbjct: 1308 DVVPPEKKPIFIQEGAIREDMIQGVTQEVIRHKE---VMPREEEQAQKKARDMLGLEETQ 1364
Query: 1156 EVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLED 1215
+ + +F E +V G E+S K + S + + + ERK +K E+
Sbjct: 1365 VILKKGKKVIFLEPGNVTMGKEISKKEEKKTFQKSPKQGRKAVQKERKVGKIKREMTKEE 1424
Query: 1216 LALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFEDTLQL 1265
+SE V+ L+++V L + E ++ +KA+++ Q+
Sbjct: 1425 ----RDMSEEVEEMATLEEKVVKQEGKLVMIERTPSWQDWKKAWDEWKQV 1470
>gi|8922764 MRG-binding protein [Homo sapiens]
Length = 204
Score = 33.9 bits (76), Expect = 1.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 1137 RLLVVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSR-ISARSSK 1195
++++ E+KE+ ++ D PH D+FS + S+ SE S K NS + +
Sbjct: 119 KVMIEEEMKEEMKE----DVDPHNGADDVFSSSGSLGKASEKSSKDKEKNSSDLGCKEGA 174
Query: 1196 NRRKAER 1202
++RK R
Sbjct: 175 DKRKRSR 181
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 33.5 bits (75), Expect = 1.4
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 32/201 (15%)
Query: 1070 EECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKP------SILEAQKNYMAF 1123
EE Q + L L G A + ALRL K R ++E + ++LE ++Y
Sbjct: 41 EEFVQRLRDTDTLDLSGPARDFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLL 100
Query: 1124 LDSQTA---TFSRHKKRLLVVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSG 1180
DS+ + T SR L R+ ++ ++ ++E E G + +G
Sbjct: 101 EDSEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASE-----------KGKKKTG 149
Query: 1181 KYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHIL 1240
+ + R + ER L+DL +A +E V+ + KD ++L
Sbjct: 150 GSKQQTEKPESEDEWERTERER----------LQDLEERDAFAERVRQRD--KDRTRNVL 197
Query: 1241 KVLFLFEFDEQGRELQKAFED 1261
+ ++E + L+ A ED
Sbjct: 198 ERSDKKAYEEAQKRLKMAEED 218
>gi|55743151 WD repeat domain 19 [Homo sapiens]
Length = 1342
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 950 LSKCGPEYFPECLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMF 1009
+SKC E F K +Y + + +++ YQ I++ + E Y AG F
Sbjct: 976 MSKCNNEAFTLAQQHNK-MEIYADIIGSEDTTNEDYQSIAL----YFEGEKRYLQAGKFF 1030
Query: 1010 ARCGAHEKALSAFLTC 1025
CG + +AL FL C
Sbjct: 1031 LLCGQYSRALKHFLKC 1046
>gi|4506341 ATP-binding cassette, sub-family D, member 3 isoform a
[Homo sapiens]
Length = 659
Score = 33.1 bits (74), Expect = 1.8
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 28 TEQGTVLIGSEHGLIEVDPVSREVKNEVSLVAEGFLPEDGSGRIVGVQDLLDQESVCVAT 87
TE VL HG E VS++ K + +P G+G I+ +++ + V +AT
Sbjct: 392 TELMQVLKDLNHGKYERTMVSQQEKGIEGVQVIPLIP--GAGEIIIADNIIKFDHVPLAT 449
Query: 88 ASGDVILCSLSTQQLECVGSVASGISVMSWSPDQELVLLATGQQTLIMMTKDFEPILEQQ 147
+GDV++ L+ + V SG +V+ P+ G+ +L + + P+ +
Sbjct: 450 PNGDVLIRDLNFE-------VRSGANVLICGPN------GCGKSSLFRVLGELWPLFGGR 496
Query: 148 IHQDDFGESKFI 159
+ + + G+ ++
Sbjct: 497 LTKPERGKLFYV 508
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.7 bits (73), Expect = 2.4
Identities = 75/396 (18%), Positives = 155/396 (39%), Gaps = 40/396 (10%)
Query: 908 EKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKD 967
EKS ++ K L + E N I +++++ + L + E L ++K
Sbjct: 577 EKSLQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQ 636
Query: 968 KNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLT--C 1025
+ Y ++ +Q ++ + E + Q H+ E + + L + +
Sbjct: 637 Q--YQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELS 694
Query: 1026 GNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKH----IDAAMVLEECA-QDYEEAV 1080
K + +L+ KDQ + + L K+ EQ+ H +D+ + E + Q E+A+
Sbjct: 695 EVLKARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKAL 754
Query: 1081 ---LLLLEGAAWEEALRLVYKYNRLDIIETNVKPS---ILEAQKNYMAFLDSQTATFSRH 1134
+ LE E L ++ +E ++K S + +A F Q+AT +
Sbjct: 755 KDQINQLELLLKERDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQT 814
Query: 1135 K------------------KRLLVVRELKE-QAQQAGLDDEVPHG--QESDLFSETSSVV 1173
K +R+L+ +++ E +AQ+ + E+ Q DL +
Sbjct: 815 KAYEEQLAQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEK-- 872
Query: 1174 SGSEMSGKYSHSNSRISARSSKNRRKAERKKHSL--KEGSPLEDLALLEALSEVVQNTEN 1231
SEM K ++ ++ E+ K L KE L+ + E++ +
Sbjct: 873 QNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREGQKKEIEILTQKLS 932
Query: 1232 LKDEVYHILKVLFLFEFDEQGRELQKAFEDTLQLME 1267
K++ HIL + +F Q ++++K + ++ E
Sbjct: 933 AKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQE 968
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 32.7 bits (73), Expect = 2.4
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 31/116 (26%)
Query: 790 EDVTKTMYPAPVTSSVYLSRD---------------PDGNKIDLVCDAMRAVME-SINPH 833
ED++KT+ P+T V L + DG + C + V++ + NP
Sbjct: 286 EDISKTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPP 345
Query: 834 KYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDA-------VSAEEALKYLL 882
+ +S LTS + + +PE+ + + V SDPD+ S +E L +LL
Sbjct: 346 QVTMSALTSPIPENSPEIVVAVFSV--------SDPDSGNNGKTISSIQEDLPFLL 393
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 32.7 bits (73), Expect = 2.4
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 1137 RLLVVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKN 1196
R L++ + QA +AG E P S+ ++ S V+G S + N R R +N
Sbjct: 107 RRLLLDDGPTQAAEAGTPGEAPTPPASETQAQDSGEVTGQAGSLLGAARNPRRGRRGRRN 166
Query: 1197 R----RKAERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQG 1252
R R ++ K + G P A SE E+ DE I+ + + + D G
Sbjct: 167 RTRRNRLTQKGKKRSRGGRP-----SAPARSE----AEDSSDESLGIV-IEEIDQGDLSG 216
Query: 1253 RELQKAFEDTLQLMERSLPEIW 1274
E Q A TLQ R L W
Sbjct: 217 EEDQSALYATLQAAARELVRQW 238
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 1049 GRTLAGKLVEQRKHIDAAMV-LEECAQDYEEAVLLLL----EGAAWEEALRLVYKYNRLD 1103
G+ L + RKH D AMV LEE AQ+Y+E + + L E L + R D
Sbjct: 107 GKALCWVCAQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRAD 166
Query: 1104 IIET-NVKPSILEA----QKNYMAFLD----SQTATFSRHKKRLLVVRELKEQAQQAGLD 1154
+T + S + A QKN++ + + R + R+L +E K Q L
Sbjct: 167 WKKTVETQKSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQ 226
Query: 1155 DEVP------HGQESDLFSETSSVVSGSE 1177
+ + H +L E V+ SE
Sbjct: 227 ELISELDRRCHSSALELLQEVIIVLERSE 255
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 840 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 895
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 896 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 953
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 954 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 982
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 829 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 884
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 885 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 942
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 943 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 971
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 808 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 863
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 864 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 921
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 922 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 950
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 837 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 892
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 893 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 950
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 951 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 979
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 837 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 892
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 893 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 950
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 951 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 979
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.3 bits (72), Expect = 3.1
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 766 NVETFIKQIDS-VNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDLVCDAMR 824
N++T +K + VN + F + +EE Y SS L D D KI+ + +
Sbjct: 837 NIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY---AESSSKLEEDKD-KKINEMSKEVT 892
Query: 825 AVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL 884
+ E++N LS TS K+ + +LE + Q+V +LQ N ++ E Y +HL
Sbjct: 893 KLKEALNSLSQ-LSYSTSSSKRQSQQLEALQQQVKQLQ-NQLAECKKQHQEVISVYRMHL 950
Query: 885 V-DVNELYDHSLGTYDFDLVLMVAEKSQK 912
+ V D + ++ M +SQK
Sbjct: 951 LYAVQGQMDEDVQKVLKQILTMCKNQSQK 979
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 32.3 bits (72), Expect = 3.1
Identities = 43/242 (17%), Positives = 105/242 (43%), Gaps = 22/242 (9%)
Query: 996 LMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGK 1055
L+QE + + A EK L ++ +AA +++ D + T+ +
Sbjct: 952 LLQEALRRKRERLQAESPEEEKGLQELA-----EEIEVLAANIDYINDGITDCQATIV-Q 1005
Query: 1056 LVEQRKHIDA---AMVLEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPS 1112
L E ++ +D+ ++V+ C+ +L A+ ++ L++ K ++ ++E ++ +
Sbjct: 1006 LEETKEELDSTDTSVVISSCSLAEARLLLDNFLKASIDKGLQVAQKEAQIRLLEGRLRQT 1065
Query: 1113 ILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGLDDEVPHGQESDLFSETSSV 1172
+ LD+ H + ++ ++++ A D+E+ E FS++ +
Sbjct: 1066 DMAGSSQNHLLLDALREKAEAHPELQALIYNVQQENGYASTDEEISEFSEGS-FSQSFT- 1123
Query: 1173 VSGSEMSGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLA---LLEALSEVVQNT 1229
M G SH + + S+ + A+ K S + P D++ + ++L+ +V+
Sbjct: 1124 -----MKGSTSHDDFKF---KSEPKLSAQMKAVSAECLGPPLDISTKNITKSLASLVEIK 1175
Query: 1230 EN 1231
E+
Sbjct: 1176 ED 1177
>gi|73695475 protein BAP28 [Homo sapiens]
Length = 2144
Score = 32.3 bits (72), Expect = 3.1
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 853 IVLQKVHELQGNAPSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDFDLVLMVAEKSQK 912
+V+ +H + G D + L+ +L + + DH L + F+ + + + +
Sbjct: 354 LVVSIIHHVTGEETEGMDGQIYKRHLEAILTKISLKNNLDHLLASLLFEEYISYSSQEEM 413
Query: 913 DPKEYL----PFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSK 952
D + FL ++ +E+ Y R T+D L+ + K I L K
Sbjct: 414 DSNKVSLLNEQFLPLIRLLESKYPR-TLDVVLEEHLKEIADLKK 456
>gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 32.0 bits (71), Expect = 4.1
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 814 NKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDP---D 870
+++ +C + A +++ KY + + V+KT+ ELE + QK+ +L+G P
Sbjct: 59 SEVQELCKQLHAKIDAAEEEKYDMEV---RVQKTSKELEDMNQKLFDLRGKFKRPPLRRV 115
Query: 871 AVSAEEALKYLL 882
+SA+ LK LL
Sbjct: 116 RMSADAMLKALL 127
>gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [Homo
sapiens]
Length = 182
Score = 32.0 bits (71), Expect = 4.1
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 814 NKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDP---D 870
+++ +C + A +++ KY + + V+KT+ ELE + QK+ +L+G P
Sbjct: 59 SEVQELCKQLHAKIDAAEEEKYDMEV---RVQKTSKELEDMNQKLFDLRGKFKRPPLRRV 115
Query: 871 AVSAEEALKYLL 882
+SA+ LK LL
Sbjct: 116 RMSADAMLKALL 127
>gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 32.0 bits (71), Expect = 4.1
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 814 NKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDP---D 870
+++ +C + A +++ KY + + V+KT+ ELE + QK+ +L+G P
Sbjct: 59 SEVQELCKQLHAKIDAAEEEKYDMEV---RVQKTSKELEDMNQKLFDLRGKFKRPPLRRV 115
Query: 871 AVSAEEALKYLL 882
+SA+ LK LL
Sbjct: 116 RMSADAMLKALL 127
>gi|93277096 limbin [Homo sapiens]
Length = 1308
Score = 32.0 bits (71), Expect = 4.1
Identities = 84/387 (21%), Positives = 140/387 (36%), Gaps = 77/387 (19%)
Query: 898 YDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY 957
YD +V + AE L T KKME YQR + E+A L + G
Sbjct: 447 YDRKMVALTAECD----------LETRKKMENQYQR-----EMMAMEEAEELLKRAGERS 491
Query: 958 FPECLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEK 1017
EC NL++ + + S + QQ +D + A+ L E + F +
Sbjct: 492 AVECSNLLRTLHGLEQEHLRKSLALQQEEDFAKAH-RQLAVFQRNELHSIFFTQ------ 544
Query: 1018 ALSAFLTCGNWKQALCVAAQLNFTK-----DQLVGLGRTLAGKLVEQRKHIDAAMVLEEC 1072
+ + + G K N++K ++L+ + A K K L +
Sbjct: 545 -IKSAIFKGELKPEAAKMLLQNYSKIQENVEELMDFFQ--ASKRYHLSKRFGHREYLVQN 601
Query: 1073 AQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILE-AQKNYMAFLDSQTATF 1131
Q E V LL AA + L+ K+ R ++ + +LE AQ +
Sbjct: 602 LQSSETRVQGLLSTAA-AQLTHLIQKHERAGYLDEDQMEMLLERAQTEVFSIKQKLDNDL 660
Query: 1132 SRHKKRL---LVVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNSR 1188
+ KK+L L+ + +E Q+ H ++ + E +G+Y H
Sbjct: 661 KQEKKKLHQKLITKRRRELLQK--------HREQRREQASVGEAFRTVEDAGQYLH---- 708
Query: 1189 ISARSSKNRRKAERKKHSLKE--GSPLEDLALLEALSEVVQNTENLKDEVYHILKVLFLF 1246
+K SL E G+ LE+L E L L+ L L
Sbjct: 709 --------------QKRSLMEEHGATLEEL------------QERLDQAALDDLRTLTLS 742
Query: 1247 EFDEQGRELQKAFED--TLQLMERSLP 1271
F++ EL++ T +L++R +P
Sbjct: 743 LFEKATDELRRLQNSAMTQELLKRGVP 769
>gi|157389009 hypothetical protein LOC144608 [Homo sapiens]
Length = 245
Score = 32.0 bits (71), Expect = 4.1
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 759 NPKVFLGNVETFIKQIDSVNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGNKIDL 818
N LG++E+ + + +NL ++ ED T + VT+S +R P G+
Sbjct: 128 NSSNILGSLESSLSHLMKFPIMNLQLSDFYTED---TKEQSDVTTSER-TRSPPGSSKTT 183
Query: 819 VCDAMRAVME------SINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGN 864
+ D ++ + + S NP K +L VK P LEI+ + + ++ N
Sbjct: 184 MIDTLKKLQDVLKTEDSKNPTKSAADLLEQIVKAMGPILEILQKAIKTMEMN 235
>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
Length = 605
Score = 32.0 bits (71), Expect = 4.1
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 1173 VSGSEMSGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLALLEALSEVVQNTENL 1232
+S ++ + H +S +S + R +ER + S+ E LAL L+E+ L
Sbjct: 125 LSEKQLKHQVDHQKELLSCKSEELRVMSERVQESMSS----EMLALQIELTEMESMKTTL 180
Query: 1233 KDEVYHI------LKVLF------LFEFDEQGRELQKAFEDTLQLMERSLPEIWTLTYQQ 1280
K+EV + L++L + E+ E +K +E++ L Q
Sbjct: 181 KEEVNELQYRQEQLELLITNLMRQVDRLKEEKEEREKEAVSYYNALEKARVANQDLQVQL 240
Query: 1281 NSATP-VLGPNSTANSIMASYQQQKTSV 1307
+ A L PNS NS+ A + ++ ++
Sbjct: 241 DQALQQALDPNSKGNSLFAEVEDRRAAM 268
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 31.6 bits (70), Expect = 5.3
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 882 LHLVDVNELYDHSLGTYDFDLVLMVA-EKSQKDPKEYLPFLNTLKK-------------- 926
++++D E+ D +F +V V +K+Q LPF TL++
Sbjct: 2034 INIIDALEMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLE 2093
Query: 927 -METNYQRFTIDKYLKRYEKAIGHLSKCGPEY 957
++ N + ID+++++Y A+G L + +Y
Sbjct: 2094 NVQRNLKHINIDQFVRKYRAALGKLPQQANDY 2125
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 31.6 bits (70), Expect = 5.3
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Query: 1140 VVRELKEQAQ----QAGLDDEVPHG--QESDLFSETSSVVSGSEMSGKYSHSNSRISARS 1193
V LKEQ Q L D + E D+ SS+ + +E K+ + +A S
Sbjct: 2119 VESSLKEQGQVPLNSTALQDIISKNIMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASS 2178
Query: 1194 SKNRRKAERKKHSLKEGSPLEDLALLEALSEVVQNTENLKDEVYHIL--KVLFLFEFDEQ 1251
+ + K + S E LA +E L V+ ENL +++ L K L E D
Sbjct: 2179 LQAKMKDLSARFSEASHKHKETLAKMEELKTKVELFENLSEKLQTFLETKTQALTEVDVP 2238
Query: 1252 GREL----QKAFEDTLQLME 1267
G+++ Q E T + +E
Sbjct: 2239 GKDVTELSQYMQESTSEFLE 2258
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,324,542
Number of Sequences: 37866
Number of extensions: 2238171
Number of successful extensions: 5939
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 5895
Number of HSP's gapped (non-prelim): 89
length of query: 1332
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1218
effective length of database: 13,930,794
effective search space: 16967707092
effective search space used: 16967707092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.