Guide to the Human Genome
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Name: NHS Sequence: fasta or formatted (1474aa) NCBI GI: 209862849
Description:

Nance-Horan syndrome protein isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [1630aa] Nance-Horan syndrome protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0        103           3
 C cysteine            1.6         24           2
 D aspartate           5.9         87           2
 E glutamate           6.4         94           2
 F phenylalanine       2.5         37           2
 G glycine             4.5         66           2
 H histidine           3.4         50           4
 I isoleucine          3.9         57           2
 K lysine              5.4         80           2
 L leucine             6.8        100           4
 M methionine          1.2         17           1
 N asparagine          4.5         66           2
 P proline             8.5        125           3
 Q glutamine           4.1         60           2
 R arginine            6.2         92           3
 S serine             15.8        233           6
 T threonine           6.4         94           2
 V valine              3.9         58           1
 W tryptophan          0.5          8           1
 Y tyrosine            1.6         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nance-Horan syndrome protein isoform 2 
NHS                   0.971   Nance-Horan syndrome protein isoform 1 
NHSL1                 0.133   NHS-like 1 
NHSL2                 0.052   NHS-like 2 
MUC12                 0.015   PREDICTED: mucin 12 
MUC12                 0.015   PREDICTED: mucin 12, cell surface associated 
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
MUC16                 0.010   mucin 16 
SRRM2                 0.009   splicing coactivator subunit SRm300 
STOX2                 0.009   storkhead box 2 
NACAD                 0.009   NAC alpha domain containing 
NACAD                 0.009   PREDICTED: NAC alpha domain containing 
LOC100130716          0.008   PREDICTED: similar to mucin 11 
MUC6                  0.008   mucin 6, gastric 
SETD1B                0.008   SET domain containing 1B 
MUC12                 0.007   PREDICTED: mucin 12 
MUC17                 0.007   mucin 17 
KIAA1522              0.007   hypothetical protein LOC57648 
MUC4                  0.006   mucin 4 isoform a 
EHBP1                 0.006   EH domain binding protein 1 isoform 1 
NOLC1                 0.006   nucleolar and coiled-body phosphoprotein 1 
DPCR1                 0.006   diffuse panbronchiolitis critical region 1 protein ...
MUC7                  0.006   mucin 7, secreted precursor 
LOC100294249          0.006   PREDICTED: hypothetical protein XP_002344067 
MUC7                  0.006   mucin 7, secreted precursor 
MUC7                  0.006   mucin 7, secreted precursor 
TNRC18                0.006   trinucleotide repeat containing 18 
UBAP2L                0.006   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.006   ubiquitin associated protein 2-like isoform b [Homo...
MLLT1                 0.006   myeloid/lymphoid or mixed-lineage leukemia (trithora...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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