CCDC99 6191

Name: CCDC99	Sequence: fasta or formatted (605aa)		NCBI GI: 157388975
Description: coiled-coil domain containing 99		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 30 2 C cysteine 1.8 11 1 D aspartate 3.5 21 1 E glutamate 14.5 88 3 F phenylalanine 1.0 6 1 G glycine 2.1 13 2 H histidine 1.2 7 1 I isoleucine 2.8 17 2 K lysine 10.2 62 2 L leucine 13.6 82 2 M methionine 3.8 23 2 N asparagine 4.8 29 2 P proline 2.8 17 2 Q glutamine 8.3 50 3 R arginine 5.3 32 2 S serine 7.6 46 2 T threonine 4.3 26 2 V valine 5.1 31 2 W tryptophan 0.0 0 0 Y tyrosine 2.3 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 99 CENPF 0.058 centromere protein F CENPE 0.058 centromere protein E DSP 0.056 desmoplakin isoform I CEP290 0.055 centrosomal protein 290kDa ROCK2 0.053 Rho-associated, coiled-coil containing protein kinas... EEA1 0.053 early endosome antigen 1, 162kD CGNL1 0.052 cingulin-like 1 ROCK1 0.051 Rho-associated, coiled-coil containing protein kinase... CLIP1 0.051 restin isoform a MYH10 0.051 myosin, heavy polypeptide 10, non-muscle MYH4 0.051 myosin, heavy polypeptide 4, skeletal muscle PMFBP1 0.050 polyamine modulated factor 1 binding protein 1 isof... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... PPL 0.049 periplakin MYH9 0.049 myosin, heavy polypeptide 9, non-muscle CCDC18 0.049 sarcoma antigen NY-SAR-41 PMFBP1 0.048 polyamine modulated factor 1 binding protein 1 isof... CEP250 0.048 centrosomal protein 2 CCDC88A 0.048 coiled-coil domain containing 88A isoform 2 CCDC88A 0.047 coiled-coil domain containing 88A isoform 1 GOLGA4 0.047 golgi autoantigen, golgin subfamily a, 4 MYH7B 0.047 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH7 0.046 myosin, heavy chain 7, cardiac muscle, beta MYH13 0.046 myosin, heavy polypeptide 13, skeletal muscle [Homo... CCDC41 0.046 NY-REN-58 antigen CCDC41 0.046 NY-REN-58 antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.