Guide to the Human Genome
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Name: DNLZ Sequence: fasta or formatted (178aa) NCBI GI: 124249392
Description:

DNL-type zinc finger

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9         23           3
 C cysteine            2.8          5           1
 D aspartate           1.7          3           1
 E glutamate           7.3         13           2
 F phenylalanine       0.6          1           1
 G glycine            11.2         20           1
 H histidine           2.8          5           2
 I isoleucine          3.4          6           2
 K lysine              2.8          5           1
 L leucine             8.4         15           2
 M methionine          0.6          1           1
 N asparagine          2.2          4           1
 P proline             7.3         13           2
 Q glutamine           3.4          6           1
 R arginine           11.2         20           3
 S serine              6.2         11           3
 T threonine           4.5          8           1
 V valine              6.2         11           2
 W tryptophan          2.8          5           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNL-type zinc finger 
LOC100289963          0.020   PREDICTED: hypothetical protein XP_002346933 
FUT4                  0.017   fucosyltransferase 4 
LOC100288426          0.014   PREDICTED: hypothetical protein XP_002343430 
LOC100292934          0.014   PREDICTED: hypothetical protein 
CD5L                  0.014   CD5 molecule-like 
SH3TC1                0.014   SH3 domain and tetratricopeptide repeats 1 
ZSCAN10               0.014   zinc finger and SCAN domain containing 10 
LOC729575             0.012   PREDICTED: hypothetical protein 
LOC100288110          0.012   PREDICTED: hypothetical protein 
LOC100288110          0.012   PREDICTED: hypothetical protein XP_002343007 
PRSSL1                0.012   protease, serine-like 1 
ZFP92                 0.012   zinc finger protein 92 homolog 
BASP1                 0.012   brain abundant, membrane attached signal protein 1 [...
NR2C2                 0.012   nuclear receptor subfamily 2, group C, member 2 [Hom...
LOC389842             0.009   PREDICTED: similar to RAN binding protein 1 
LOC100293194          0.009   PREDICTED: hypothetical protein 
LOC100287184          0.009   PREDICTED: hypothetical protein XP_002343805 
RPLP2                 0.009   ribosomal protein P2 
DACT3                 0.009   thymus expressed gene 3-like 
ZNF721                0.009   zinc finger protein 721 
RORC                  0.009   RAR-related orphan receptor C isoform b 
RORC                  0.009   RAR-related orphan receptor C isoform a 
GIYD1                 0.009   GIY-YIG domain containing 1 isoform 2 
LOC100131930          0.009   PREDICTED: similar to hCG2004312 isoform 2 
LOC100131930          0.009   PREDICTED: similar to hCG2004312 isoform 1 
LOC100288367          0.009   PREDICTED: hypothetical protein XP_002343418 isofor...
LOC100288367          0.009   PREDICTED: hypothetical protein XP_002343419 isofor...
MARCKS                0.009   myristoylated alanine-rich protein kinase C substra...
RORB                  0.009   RAR-related orphan receptor B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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